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The map label for this gene is 53721696

Identifier: 53721696

GI number: 53721696

Start: 902357

End: 904294

Strand: Reverse

Name: 53721696

Synonym: BPSS0666

Alternate gene names: NA

Gene position: 904294-902357 (Counterclockwise)

Preceding gene: 53721698

Following gene: 53721681

Centisome position: 28.5

GC content: 57.22

Gene sequence:

>1938_bases
ATGAAAAATTCCCACAATGTCGTCAATCGCTTTATTGTCGCCGCTTCTATTATCATTGGAGTCGTTCTTTACAGTTCCGC
TTGGGCAAATCCGCAGCCCATGCATACGAAGCAGGCGCGTATGCCGCGTATCCCGCAGAATCTCCCGCTTTCACCAGACC
AAGCCAAATACGACCTGCCGCTCAGCAAGTATGACCGCGCAACGCTGATGGAGCCGTTGCGTCGGAAGCAATCAGCGAAA
CCCGACAGGCGCACCCGGCCTGGAGCAGATTGCCGCGACATGTCAATAATGACGCAATATCACGGTACGGCGCTTGCTGA
TTACATAGCAAACCTCCCGGATTATGAGTGCCACTACGGACTATTCTCGATTGACAGGGCGATGGCCGCGCAGATTTTCA
ATTCTGAAAACGTGTGGGCTGTTGCCAGCCGTCTCACTCAAGAAATCAATCGTTACGACGCAACAAATATTACATTGGTA
AATTTGCTTATTTATCTGAGAGCCGCTTATTTCCAATATGACGCAGCCCAGCTTGCTGATCCGATTCCCGGTCTCGTAGT
CTGGCTGCGTCCGTATATTTTGCAGAGCCTCTCTGGCGACGCGCTTTACCTCGAGAATTCACGTGCGCCGAGCACCGCCA
ACGAGCTGATGATCCTAATCACAAACATGAAGGACGAGGCGTACTACCTGCCAACGCTGAAGGACCGAATCGCGTTCTAC
ACCGCGAGCGCGACCAACCCTCAGGCTGCGGCGCCGCTACTGCAGCGAAGCGCGGCGGGTGGCTTCACCGGCTTGCTCAC
GGTGTTCTTCTACGCGCATCAGCGCAGCGGCGCTCAGCCGATGCTCGATAGCGATGCGACTCTGCCGGAGACGCTCAACC
GCTTCGTCACGGCGAACCGCGCATACCTGTCGAACACCAGTGCCGCCTATCAGCTCGCCGATGCGGCGCGCGAAACGTAC
CGCTTTCTCCGCTATCCGTCGCAGAAGCCGCGGGTGAAGAAAATGATTCAGGATATGCTCGCGTCGACTACCATGACGGG
CCCGGACAACGACCTGTGGCTCGCGGCAGCGGAAGCAGCCGATTACGGCGATCCCGGCAACTGCGCAGATTACGGCACGT
GCGACTATCAGAAGCGGCTCATCGAGGCAGTGCTCACGCATCGGTACTCATGCAATGCGAACGTACGAATTCTCGCGCAG
GACATGACGGTGCCGCAATTCCAGTCGGCATGCCAATCGGTCGCCCAGGAGGAGGACTATTTCCACAGGATGATGAAGAC
AGGGCACGTACCGGTCGCGAACGATCACAATGACACGATCGAAATAGTCGTATTCGGCGACTACGACAATTATCGGAAGT
ACGCTTCGGTGATCTACGGAATTAGCACCGATAACGGCGGCATGTACGTTGAAGGCGATCCGTCGGCACCCGGCAATCAG
GCGCGCTTCATCGCGCACGAGGCTTCGTGGCTACGGCCGGAGTTCAAGGTCTGGAACCTTGAGCACGAGTTTACGCACTA
TCTCGACGGCCGTTACGACATGGCGGGCGACTTCGCGGCGAGCACGGCGAAGCCCACCGTGTGGTGGATCGAGGGTCTTG
CCGAATATATCTCCAGAAAGAACGATGACCAGGAATCGATCGACGCGGTGCGCACGAACGCATATCGGCTCTCGGACGTG
CTCCAGACGACTTATTCGTCCGGCGACTATGTCACGCGCGCGTATCGATGGGGTTATATGGCGACGCGCTTCATGTTTGA
ACGTCATCGCGCGGACGTCGACGCGATCGTGTCACGTTTTCGCGTGGGCGATTACGACGGCTACGCGGACTATGTCGCGT
ACATGGGCAACCGCTATGACAGCGAGTTTGTTGACTGGGCACGCGGCGCGACAACAACCGGTGAGCCACCGTTGCCGCCA
ACGAAAGCGGGGCATTGA

Upstream 100 bases:

>100_bases
ACCGCTTGCGTTCTGTGAGGCTTTATAAATCGACCTTGTATTTCTCAATGGATTGACTATACATGATCATCAATCAAATT
CACGACAACAAAGGGCAAAT

Downstream 100 bases:

>100_bases
CTCCCCGTAGTTCCGGACACGGCTTCACACTATGGGCGATGAATTCGCCGTTCAGGATCGTCAAGAGTTCTAACGGCGAG
TCGCTTAACGAACCGCTGAT

Product: collagenase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 645; Mature: 645

Protein sequence:

>645_residues
MKNSHNVVNRFIVAASIIIGVVLYSSAWANPQPMHTKQARMPRIPQNLPLSPDQAKYDLPLSKYDRATLMEPLRRKQSAK
PDRRTRPGADCRDMSIMTQYHGTALADYIANLPDYECHYGLFSIDRAMAAQIFNSENVWAVASRLTQEINRYDATNITLV
NLLIYLRAAYFQYDAAQLADPIPGLVVWLRPYILQSLSGDALYLENSRAPSTANELMILITNMKDEAYYLPTLKDRIAFY
TASATNPQAAAPLLQRSAAGGFTGLLTVFFYAHQRSGAQPMLDSDATLPETLNRFVTANRAYLSNTSAAYQLADAARETY
RFLRYPSQKPRVKKMIQDMLASTTMTGPDNDLWLAAAEAADYGDPGNCADYGTCDYQKRLIEAVLTHRYSCNANVRILAQ
DMTVPQFQSACQSVAQEEDYFHRMMKTGHVPVANDHNDTIEIVVFGDYDNYRKYASVIYGISTDNGGMYVEGDPSAPGNQ
ARFIAHEASWLRPEFKVWNLEHEFTHYLDGRYDMAGDFAASTAKPTVWWIEGLAEYISRKNDDQESIDAVRTNAYRLSDV
LQTTYSSGDYVTRAYRWGYMATRFMFERHRADVDAIVSRFRVGDYDGYADYVAYMGNRYDSEFVDWARGATTTGEPPLPP
TKAGH

Sequences:

>Translated_645_residues
MKNSHNVVNRFIVAASIIIGVVLYSSAWANPQPMHTKQARMPRIPQNLPLSPDQAKYDLPLSKYDRATLMEPLRRKQSAK
PDRRTRPGADCRDMSIMTQYHGTALADYIANLPDYECHYGLFSIDRAMAAQIFNSENVWAVASRLTQEINRYDATNITLV
NLLIYLRAAYFQYDAAQLADPIPGLVVWLRPYILQSLSGDALYLENSRAPSTANELMILITNMKDEAYYLPTLKDRIAFY
TASATNPQAAAPLLQRSAAGGFTGLLTVFFYAHQRSGAQPMLDSDATLPETLNRFVTANRAYLSNTSAAYQLADAARETY
RFLRYPSQKPRVKKMIQDMLASTTMTGPDNDLWLAAAEAADYGDPGNCADYGTCDYQKRLIEAVLTHRYSCNANVRILAQ
DMTVPQFQSACQSVAQEEDYFHRMMKTGHVPVANDHNDTIEIVVFGDYDNYRKYASVIYGISTDNGGMYVEGDPSAPGNQ
ARFIAHEASWLRPEFKVWNLEHEFTHYLDGRYDMAGDFAASTAKPTVWWIEGLAEYISRKNDDQESIDAVRTNAYRLSDV
LQTTYSSGDYVTRAYRWGYMATRFMFERHRADVDAIVSRFRVGDYDGYADYVAYMGNRYDSEFVDWARGATTTGEPPLPP
TKAGH
>Mature_645_residues
MKNSHNVVNRFIVAASIIIGVVLYSSAWANPQPMHTKQARMPRIPQNLPLSPDQAKYDLPLSKYDRATLMEPLRRKQSAK
PDRRTRPGADCRDMSIMTQYHGTALADYIANLPDYECHYGLFSIDRAMAAQIFNSENVWAVASRLTQEINRYDATNITLV
NLLIYLRAAYFQYDAAQLADPIPGLVVWLRPYILQSLSGDALYLENSRAPSTANELMILITNMKDEAYYLPTLKDRIAFY
TASATNPQAAAPLLQRSAAGGFTGLLTVFFYAHQRSGAQPMLDSDATLPETLNRFVTANRAYLSNTSAAYQLADAARETY
RFLRYPSQKPRVKKMIQDMLASTTMTGPDNDLWLAAAEAADYGDPGNCADYGTCDYQKRLIEAVLTHRYSCNANVRILAQ
DMTVPQFQSACQSVAQEEDYFHRMMKTGHVPVANDHNDTIEIVVFGDYDNYRKYASVIYGISTDNGGMYVEGDPSAPGNQ
ARFIAHEASWLRPEFKVWNLEHEFTHYLDGRYDMAGDFAASTAKPTVWWIEGLAEYISRKNDDQESIDAVRTNAYRLSDV
LQTTYSSGDYVTRAYRWGYMATRFMFERHRADVDAIVSRFRVGDYDGYADYVAYMGNRYDSEFVDWARGATTTGEPPLPP
TKAGH

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Secreted [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 PKD domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR013510
- InterPro:   IPR002169
- InterPro:   IPR013661
- InterPro:   IPR022409
- InterPro:   IPR000601 [H]

Pfam domain/function: PF01752 Peptidase_M9; PF08453 Peptidase_M9_N; PF00801 PKD [H]

EC number: =3.4.24.3 [H]

Molecular weight: Translated: 72824; Mature: 72824

Theoretical pI: Translated: 6.17; Mature: 6.17

Prosite motif: PS00142 ZINC_PROTEASE

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
3.3 %Met     (Translated Protein)
4.2 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
3.3 %Met     (Mature Protein)
4.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKNSHNVVNRFIVAASIIIGVVLYSSAWANPQPMHTKQARMPRIPQNLPLSPDQAKYDLP
CCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHCCCCCCCCCCCCCCCCCCCCC
LSKYDRATLMEPLRRKQSAKPDRRTRPGADCRDMSIMTQYHGTALADYIANLPDYECHYG
HHHCCHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHCCHHHHHHHHCCCCCCCCCC
LFSIDRAMAAQIFNSENVWAVASRLTQEINRYDATNITLVNLLIYLRAAYFQYDAAQLAD
HHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCHHHHCC
PIPGLVVWLRPYILQSLSGDALYLENSRAPSTANELMILITNMKDEAYYLPTLKDRIAFY
CCCHHHHHHHHHHHHHCCCCEEEEECCCCCCCCCCEEEEEECCCCCEEECCCHHHCEEEE
TASATNPQAAAPLLQRSAAGGFTGLLTVFFYAHQRSGAQPMLDSDATLPETLNRFVTANR
EECCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHCCH
AYLSNTSAAYQLADAARETYRFLRYPSQKPRVKKMIQDMLASTTMTGPDNDLWLAAAEAA
HHHCCCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCCCCCCEEEEEECCC
DYGDPGNCADYGTCDYQKRLIEAVLTHRYSCNANVRILAQDMTVPQFQSACQSVAQEEDY
CCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCEEEEEECCCCHHHHHHHHHHHHHHHH
FHRMMKTGHVPVANDHNDTIEIVVFGDYDNYRKYASVIYGISTDNGGMYVEGDPSAPGNQ
HHHHHHCCCCCCCCCCCCEEEEEEECCCHHHHHHHHHHEEEEECCCCEEEECCCCCCCCC
ARFIAHEASWLRPEFKVWNLEHEFTHYLDGRYDMAGDFAASTAKPTVWWIEGLAEYISRK
CEEEEEHHHHCCCCCEEECCCHHHHHHHCCCCCCCCCHHCCCCCCHHHHHHHHHHHHHCC
NDDQESIDAVRTNAYRLSDVLQTTYSSGDYVTRAYRWGYMATRFMFERHRADVDAIVSRF
CCCHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHH
RVGDYDGYADYVAYMGNRYDSEFVDWARGATTTGEPPLPPTKAGH
HCCCCCCHHHHHHHHCCCCCHHHHHHHCCCCCCCCCCCCCCCCCC
>Mature Secondary Structure
MKNSHNVVNRFIVAASIIIGVVLYSSAWANPQPMHTKQARMPRIPQNLPLSPDQAKYDLP
CCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHCCCCCCCCCCCCCCCCCCCCC
LSKYDRATLMEPLRRKQSAKPDRRTRPGADCRDMSIMTQYHGTALADYIANLPDYECHYG
HHHCCHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHCCHHHHHHHHCCCCCCCCCC
LFSIDRAMAAQIFNSENVWAVASRLTQEINRYDATNITLVNLLIYLRAAYFQYDAAQLAD
HHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCHHHHCC
PIPGLVVWLRPYILQSLSGDALYLENSRAPSTANELMILITNMKDEAYYLPTLKDRIAFY
CCCHHHHHHHHHHHHHCCCCEEEEECCCCCCCCCCEEEEEECCCCCEEECCCHHHCEEEE
TASATNPQAAAPLLQRSAAGGFTGLLTVFFYAHQRSGAQPMLDSDATLPETLNRFVTANR
EECCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHCCH
AYLSNTSAAYQLADAARETYRFLRYPSQKPRVKKMIQDMLASTTMTGPDNDLWLAAAEAA
HHHCCCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCCCCCCEEEEEECCC
DYGDPGNCADYGTCDYQKRLIEAVLTHRYSCNANVRILAQDMTVPQFQSACQSVAQEEDY
CCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCEEEEEECCCCHHHHHHHHHHHHHHHH
FHRMMKTGHVPVANDHNDTIEIVVFGDYDNYRKYASVIYGISTDNGGMYVEGDPSAPGNQ
HHHHHHCCCCCCCCCCCCEEEEEEECCCHHHHHHHHHHEEEEECCCCEEEECCCCCCCCC
ARFIAHEASWLRPEFKVWNLEHEFTHYLDGRYDMAGDFAASTAKPTVWWIEGLAEYISRK
CEEEEEHHHHCCCCCEEECCCHHHHHHHCCCCCCCCCHHCCCCCCHHHHHHHHHHHHHCC
NDDQESIDAVRTNAYRLSDVLQTTYSSGDYVTRAYRWGYMATRFMFERHRADVDAIVSRF
CCCHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHH
RVGDYDGYADYVAYMGNRYDSEFVDWARGATTTGEPPLPPTKAGH
HCCCCCCHHHHHHHHCCCCCHHHHHHHCCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 1311172 [H]