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The map label for this gene is acoR [H]

Identifier: 53721632

GI number: 53721632

Start: 817491

End: 819431

Strand: Reverse

Name: acoR [H]

Synonym: BPSS0596

Alternate gene names: 53721632

Gene position: 819431-817491 (Counterclockwise)

Preceding gene: 53721637

Following gene: 53721631

Centisome position: 25.83

GC content: 71.56

Gene sequence:

>1941_bases
ATGCCGCAATCTTCCGTGCTGCCCGCCGCGGCGAGCCGCGTCGATCTGCTCGCGCAAGCGCACGCCCGCTCGCTGTCGGT
CGGCCTGCGCGCGTCCGAGCTGCCCGATTTCTCGCCGCTGTCGCGCGCCGCGCTGCGCGAGCTGATCGACGGCAGCCAAT
CGCTGTACACGCACGCGCGCCCGGTGATGGACACGCTGCACACGCAGATCGCCGATACGCAAAGCCTCGTGCTGCTGACC
GACCGCGACGGCGTGATCCTGCACAGCATCGGCGACGCCGATTTCGTCGAAAAGGCGAATCGGGTCGCGCTCTGCCCCGG
CGTGTCATGGGCGGAAGACGCGCGGGGCACGAATGCGATCGGCACCGCGCTGATCGCGGGCCAGGCGCTCGCCGTGCACG
GCGCCGAGCATTTCCTGCGCGCGAATCACGTGCTCACCTGCTCGTGCGCGCCGATCGTCGATCCGTTCGGCCGCCTCCTC
GGCGCGCTCGACGTGAGCGGCGATCCGCGCGGCTTCAGCCCGCATACGCTCGCGCTCGTGAAGATGTCCGCGCAACTGAT
CGAAAACCATCTGTTCGCGAATCAGTGCGCGGACGCGCTGCGCGTGCGCTTTCACGCGCACGACGAATTCGTCGATTCGC
TGTTCGCCGGCCTCGTCGCGTTCAGCCCGAGCGGTGCGCTGATCGCGGCCAATCGCAGCGCACAATTCCAGCTCGGCGCG
AATCTCGATGCACTGCAACAGCGCGGTTGCGACGAACTGTTCGGCCTGTCTTTCGCGAAGCTCGCGCAGCATGCGGCGCG
CGAACCGCTCGCGTGCTTCACGCTGACGCTCGGCACCGGCGTGCGCGTGCGCGCGCGCTGCGAATTCGCGCACGCGCAGC
GCACGGCCGTTGCGGTGAGCGGGCGCGCCGCGCCGCCGCGCGCAACCGATGCGGCGCGCGACGAGGAGCCCGACGCGATC
ACGTTCGCGACGCTCGATACGGGCGATGCGCGCATGACCGCCGTGCTGCAGCGGGTCGGCAAGGTGCGCGGGCGCGACCT
GCCGGTGCTCGTGCTCGGCGAAACCGGCACCGGCAAGGAATGGCTCGCGCGCGCGCTGCACCACGCGTCGCCGCGCCGCG
ACGGCCCGTTCGTCGCGGTCAACTGCGCGGCGCTGCCCGATTCGCTGATCGAAGCGGAACTATTCGGCTACGAGGACGGC
GCGTTCACCGGCGCGCGCAAGCGCGGCAGCCCCGGCAAGATCGCGCAGGCGGACGGCGGCACGCTGTTTCTCGACGAAAT
CGGCGACATGCCGCTCGCGCAGCAGGTCCGGCTGATGCGCGTGCTGCAGGAGCGCGCGGTGATGCCGCTCGGCGGCGCGC
GCGCGGTGCCGGTGGACGTGCGGATCGTCTGCGCGACGCACCGCGACCTGCGCGCGATGATCGCCGCCGGCACGTTTCGC
GAGGATCTGTTCTACCGGATCAACGGCCTGGCGGTCACGCTGCCGCCGCTTGCCGAGCGCTCGGATCTCGAGACGCTCGT
CGCCCGCGTGCTCGCGCGGCTCGCGCGCAGCGAGCCGATGCCGGCCACCGTGTCGGCGGCGGTGCTCGCCGCGTTCGCGC
GCTGCCGGTGGCCGGGCAATCTGCGTCAAATGACGAACGTGCTGCGCACGGCGGGCATGCTCGCCGAAGGCGAAGCGCGG
ATCGACGTCGAGCATCTGCCTGACGATTTCTGGCTCGACTGCGACGCGCGCGCGCGCGATGCGGCACCGCCGCGCACGTG
TGCCGACGCGGCGGCGGGCGCGGCAGCGGCCGGCGCCTCGACGCTGCAGGATCATCAGGTCGCGCTGATCGACGGCGCGC
TCGACCGGCATCGCGGCAACGTATCGGCGGCCGCGCGCGAGCTCGGGCTCGCGCGCAATACCGTCTATCGGCATTTGCGT
AGACGGCGGTCGGGGGAGTGA

Upstream 100 bases:

>100_bases
GCGGCGCTTGTATGATGGGACGTGCCCGCGCCGCCACGTCCACCGCTGCGCCGGTCGAGCGGAGAACGCACTCCGCCGGC
GGGCCTCCTGGAGACAAGTC

Downstream 100 bases:

>100_bases
TCGGCGCGGTCGGCGGTCGGCGGTCGGCGCTCGGCGGTCGGCGGTCGGCGGTCGGCGGTCGGCGGTCGGCGGTCGGCGGC
TATCAACTATCGACTGCCGA

Product: sigma-54 activated regulatory protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 646; Mature: 645

Protein sequence:

>646_residues
MPQSSVLPAAASRVDLLAQAHARSLSVGLRASELPDFSPLSRAALRELIDGSQSLYTHARPVMDTLHTQIADTQSLVLLT
DRDGVILHSIGDADFVEKANRVALCPGVSWAEDARGTNAIGTALIAGQALAVHGAEHFLRANHVLTCSCAPIVDPFGRLL
GALDVSGDPRGFSPHTLALVKMSAQLIENHLFANQCADALRVRFHAHDEFVDSLFAGLVAFSPSGALIAANRSAQFQLGA
NLDALQQRGCDELFGLSFAKLAQHAAREPLACFTLTLGTGVRVRARCEFAHAQRTAVAVSGRAAPPRATDAARDEEPDAI
TFATLDTGDARMTAVLQRVGKVRGRDLPVLVLGETGTGKEWLARALHHASPRRDGPFVAVNCAALPDSLIEAELFGYEDG
AFTGARKRGSPGKIAQADGGTLFLDEIGDMPLAQQVRLMRVLQERAVMPLGGARAVPVDVRIVCATHRDLRAMIAAGTFR
EDLFYRINGLAVTLPPLAERSDLETLVARVLARLARSEPMPATVSAAVLAAFARCRWPGNLRQMTNVLRTAGMLAEGEAR
IDVEHLPDDFWLDCDARARDAAPPRTCADAAAGAAAAGASTLQDHQVALIDGALDRHRGNVSAAARELGLARNTVYRHLR
RRRSGE

Sequences:

>Translated_646_residues
MPQSSVLPAAASRVDLLAQAHARSLSVGLRASELPDFSPLSRAALRELIDGSQSLYTHARPVMDTLHTQIADTQSLVLLT
DRDGVILHSIGDADFVEKANRVALCPGVSWAEDARGTNAIGTALIAGQALAVHGAEHFLRANHVLTCSCAPIVDPFGRLL
GALDVSGDPRGFSPHTLALVKMSAQLIENHLFANQCADALRVRFHAHDEFVDSLFAGLVAFSPSGALIAANRSAQFQLGA
NLDALQQRGCDELFGLSFAKLAQHAAREPLACFTLTLGTGVRVRARCEFAHAQRTAVAVSGRAAPPRATDAARDEEPDAI
TFATLDTGDARMTAVLQRVGKVRGRDLPVLVLGETGTGKEWLARALHHASPRRDGPFVAVNCAALPDSLIEAELFGYEDG
AFTGARKRGSPGKIAQADGGTLFLDEIGDMPLAQQVRLMRVLQERAVMPLGGARAVPVDVRIVCATHRDLRAMIAAGTFR
EDLFYRINGLAVTLPPLAERSDLETLVARVLARLARSEPMPATVSAAVLAAFARCRWPGNLRQMTNVLRTAGMLAEGEAR
IDVEHLPDDFWLDCDARARDAAPPRTCADAAAGAAAAGASTLQDHQVALIDGALDRHRGNVSAAARELGLARNTVYRHLR
RRRSGE
>Mature_645_residues
PQSSVLPAAASRVDLLAQAHARSLSVGLRASELPDFSPLSRAALRELIDGSQSLYTHARPVMDTLHTQIADTQSLVLLTD
RDGVILHSIGDADFVEKANRVALCPGVSWAEDARGTNAIGTALIAGQALAVHGAEHFLRANHVLTCSCAPIVDPFGRLLG
ALDVSGDPRGFSPHTLALVKMSAQLIENHLFANQCADALRVRFHAHDEFVDSLFAGLVAFSPSGALIAANRSAQFQLGAN
LDALQQRGCDELFGLSFAKLAQHAAREPLACFTLTLGTGVRVRARCEFAHAQRTAVAVSGRAAPPRATDAARDEEPDAIT
FATLDTGDARMTAVLQRVGKVRGRDLPVLVLGETGTGKEWLARALHHASPRRDGPFVAVNCAALPDSLIEAELFGYEDGA
FTGARKRGSPGKIAQADGGTLFLDEIGDMPLAQQVRLMRVLQERAVMPLGGARAVPVDVRIVCATHRDLRAMIAAGTFRE
DLFYRINGLAVTLPPLAERSDLETLVARVLARLARSEPMPATVSAAVLAAFARCRWPGNLRQMTNVLRTAGMLAEGEARI
DVEHLPDDFWLDCDARARDAAPPRTCADAAAGAAAAGASTLQDHQVALIDGALDRHRGNVSAAARELGLARNTVYRHLRR
RRSGE

Specific function: Required for sigma-54-dependent transcription of acoXABC [H]

COG id: COG3284

COG function: function code QK; Transcriptional activator of acetoin/glycerol metabolism

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 sigma-54 factor interaction domain [H]

Homologues:

Organism=Escherichia coli, GI1789233, Length=322, Percent_Identity=40.3726708074534, Blast_Score=236, Evalue=4e-63,
Organism=Escherichia coli, GI1790299, Length=323, Percent_Identity=41.7956656346749, Blast_Score=215, Evalue=7e-57,
Organism=Escherichia coli, GI87082117, Length=232, Percent_Identity=48.7068965517241, Blast_Score=214, Evalue=1e-56,
Organism=Escherichia coli, GI1788905, Length=320, Percent_Identity=39.6875, Blast_Score=213, Evalue=4e-56,
Organism=Escherichia coli, GI1788550, Length=323, Percent_Identity=38.0804953560372, Blast_Score=212, Evalue=5e-56,
Organism=Escherichia coli, GI1790437, Length=312, Percent_Identity=40.3846153846154, Blast_Score=206, Evalue=3e-54,
Organism=Escherichia coli, GI1789087, Length=318, Percent_Identity=39.622641509434, Blast_Score=197, Evalue=1e-51,
Organism=Escherichia coli, GI1786524, Length=308, Percent_Identity=40.2597402597403, Blast_Score=196, Evalue=5e-51,
Organism=Escherichia coli, GI87081872, Length=217, Percent_Identity=44.7004608294931, Blast_Score=185, Evalue=7e-48,
Organism=Escherichia coli, GI87082152, Length=229, Percent_Identity=46.2882096069869, Blast_Score=184, Evalue=2e-47,
Organism=Escherichia coli, GI1787583, Length=326, Percent_Identity=33.4355828220859, Blast_Score=166, Evalue=3e-42,
Organism=Escherichia coli, GI87081858, Length=586, Percent_Identity=24.9146757679181, Blast_Score=148, Evalue=9e-37,
Organism=Escherichia coli, GI1789828, Length=334, Percent_Identity=32.6347305389222, Blast_Score=137, Evalue=2e-33,

Paralogues:

None

Copy number: 10-20 Molecules/Cell [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003593
- InterPro:   IPR020441
- InterPro:   IPR009057
- InterPro:   IPR002197
- InterPro:   IPR002078 [H]

Pfam domain/function: PF02954 HTH_8; PF00158 Sigma54_activat [H]

EC number: NA

Molecular weight: Translated: 68948; Mature: 68817

Theoretical pI: Translated: 7.30; Mature: 7.30

Prosite motif: PS00675 SIGMA54_INTERACT_1 ; PS00676 SIGMA54_INTERACT_2 ; PS50045 SIGMA54_INTERACT_4

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.9 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
1.9 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPQSSVLPAAASRVDLLAQAHARSLSVGLRASELPDFSPLSRAALRELIDGSQSLYTHAR
CCCCCCCHHHHHHHHHHHHHHHHHHHCCCCHHCCCCCCHHHHHHHHHHHCCCHHHHHHHH
PVMDTLHTQIADTQSLVLLTDRDGVILHSIGDADFVEKANRVALCPGVSWAEDARGTNAI
HHHHHHHHHHCCCCEEEEEECCCCEEEEECCCHHHHHHCCCEEECCCCCCHHHCCCCCHH
GTALIAGQALAVHGAEHFLRANHVLTCSCAPIVDPFGRLLGALDVSGDPRGFSPHTLALV
HHHHHHCCHHHHHHHHHHHHCCCEEEEECCHHHHHHHHHHHHHCCCCCCCCCCCHHHHHH
KMSAQLIENHLFANQCADALRVRFHAHDEFVDSLFAGLVAFSPSGALIAANRSAQFQLGA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEECCCCEEEECC
NLDALQQRGCDELFGLSFAKLAQHAAREPLACFTLTLGTGVRVRARCEFAHAQRTAVAVS
CHHHHHHCCCHHHHCCHHHHHHHHHHCCCCEEEEEEECCCEEEEEEEHHHHHHHEEEEEC
GRAAPPRATDAARDEEPDAITFATLDTGDARMTAVLQRVGKVRGRDLPVLVLGETGTGKE
CCCCCCCCCCCCCCCCCCEEEEEEECCCCHHHHHHHHHHHHHCCCCCCEEEECCCCCCHH
WLARALHHASPRRDGPFVAVNCAALPDSLIEAELFGYEDGAFTGARKRGSPGKIAQADGG
HHHHHHHHCCCCCCCCEEEEEHHHCCHHHHHHHHCCCCCCCCCCCCCCCCCCCEEECCCC
TLFLDEIGDMPLAQQVRLMRVLQERAVMPLGGARAVPVDVRIVCATHRDLRAMIAAGTFR
EEEHHHHCCCCHHHHHHHHHHHHHHCCCCCCCCEECCEEEEEEEECCHHHHHHHHHCHHH
EDLFYRINGLAVTLPPLAERSDLETLVARVLARLARSEPMPATVSAAVLAAFARCRWPGN
HHHHEEECCEEEECCCCCCCCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCCCC
LRQMTNVLRTAGMLAEGEARIDVEHLPDDFWLDCDARARDAAPPRTCADAAAGAAAAGAS
HHHHHHHHHHHCCCCCCCCEEEHHHCCCCCEECCCCCCCCCCCCCHHHHHHCCHHHCCCC
TLQDHQVALIDGALDRHRGNVSAAARELGLARNTVYRHLRRRRSGE
HHCCCEEEEEECHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHCCCC
>Mature Secondary Structure 
PQSSVLPAAASRVDLLAQAHARSLSVGLRASELPDFSPLSRAALRELIDGSQSLYTHAR
CCCCCCHHHHHHHHHHHHHHHHHHHCCCCHHCCCCCCHHHHHHHHHHHCCCHHHHHHHH
PVMDTLHTQIADTQSLVLLTDRDGVILHSIGDADFVEKANRVALCPGVSWAEDARGTNAI
HHHHHHHHHHCCCCEEEEEECCCCEEEEECCCHHHHHHCCCEEECCCCCCHHHCCCCCHH
GTALIAGQALAVHGAEHFLRANHVLTCSCAPIVDPFGRLLGALDVSGDPRGFSPHTLALV
HHHHHHCCHHHHHHHHHHHHCCCEEEEECCHHHHHHHHHHHHHCCCCCCCCCCCHHHHHH
KMSAQLIENHLFANQCADALRVRFHAHDEFVDSLFAGLVAFSPSGALIAANRSAQFQLGA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEECCCCEEEECC
NLDALQQRGCDELFGLSFAKLAQHAAREPLACFTLTLGTGVRVRARCEFAHAQRTAVAVS
CHHHHHHCCCHHHHCCHHHHHHHHHHCCCCEEEEEEECCCEEEEEEEHHHHHHHEEEEEC
GRAAPPRATDAARDEEPDAITFATLDTGDARMTAVLQRVGKVRGRDLPVLVLGETGTGKE
CCCCCCCCCCCCCCCCCCEEEEEEECCCCHHHHHHHHHHHHHCCCCCCEEEECCCCCCHH
WLARALHHASPRRDGPFVAVNCAALPDSLIEAELFGYEDGAFTGARKRGSPGKIAQADGG
HHHHHHHHCCCCCCCCEEEEEHHHCCHHHHHHHHCCCCCCCCCCCCCCCCCCCEEECCCC
TLFLDEIGDMPLAQQVRLMRVLQERAVMPLGGARAVPVDVRIVCATHRDLRAMIAAGTFR
EEEHHHHCCCCHHHHHHHHHHHHHHCCCCCCCCEECCEEEEEEEECCHHHHHHHHHCHHH
EDLFYRINGLAVTLPPLAERSDLETLVARVLARLARSEPMPATVSAAVLAAFARCRWPGN
HHHHEEECCEEEECCCCCCCCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCCCC
LRQMTNVLRTAGMLAEGEARIDVEHLPDDFWLDCDARARDAAPPRTCADAAAGAAAAGAS
HHHHHHHHHHHCCCCCCCCEEEHHHCCCCCEECCCCCCCCCCCCCHHHHHHCCHHHCCCC
TLQDHQVALIDGALDRHRGNVSAAARELGLARNTVYRHLRRRRSGE
HHCCCEEEEEECHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Protein + DNA = Protein-DNA [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 1378052 [H]