| Definition | Burkholderia pseudomallei K96243 chromosome 2, complete sequence. |
|---|---|
| Accession | NC_006351 |
| Length | 3,173,005 |
Click here to switch to the map view.
The map label for this gene is 53721547
Identifier: 53721547
GI number: 53721547
Start: 696060
End: 697061
Strand: Reverse
Name: 53721547
Synonym: BPSS0511
Alternate gene names: NA
Gene position: 697061-696060 (Counterclockwise)
Preceding gene: 53721548
Following gene: 53721546
Centisome position: 21.97
GC content: 74.55
Gene sequence:
>1002_bases ATGACGCGCACCGGCATGATCCTGCTGTCGCTCGGCACGGCGGCGTTCGTCGCTCTCCTCGCGTGGCAGGGCCTCGGCGC GGTCGCGGCGACGCTCGCATCGGCCGGCTGGGGCCTCGCGCTCGTCGCGGCGTTCCACCTGGTGCCGCTCGTCATCGATG CGACGGCGATCGCGGTGATGTTCCGTCCGGGCGAGCCCGGCAGCCGGCTCGGCGAAGCGCTGCGCGCGCGCTGGGTCGGC GAAGCGGTGAACAGCCTGCTGCCCGCCGGGCAGATCGGCGGGCCGGTGCTGATGGTCCGCTATCTCGCACAGCGCGGCGC GCGCCTCGCCGACGCGGCGGCCGCGATCACGGTCAGCACGACGATGCAGGCGCTCGCGCAAATGGTGTTCGCGCTCGTCG GCATCGCGGCGTTCAGCGCGTACGCGACGCATGACGCCGCCGCGCATCTGCGCACGCCGGCGCTGATCGCGACCGCGGTG CTGGGCGGCTGCGCCGCGCTCTTCTACTGCGCGCAGCGCCGGGGCCTGTTCGGGCGCGGGCTGCGCGCGGCGTCGACGCT GCTCGGCCCGCGCGACTGGTCGTCGCTCGCCACGCGCGCGGACGCGATCGACCACGCGCTCGACCGGCTGTACCGCGAGC GTGCGAAAGTCCGCGCGACATTCGTGCTGAGCTTCGTCGGCTGGATCGTCGGCACCGCGGAAGTGTGGCTCGCGCTGCGC TTCCTCGGCCACCCGGTGAGCTGGCTCGACGCGCTGCTGCTCGAGAGCGTCGGGCAGGCGATCCGCGGCGCCGCGTTCGC GATCCCCGGCTCGCTCGGCGCGCAGGAAGGCGGCTATCTGCTGCTCGCGCCGCTCGTCGGCCTGCCGCCCGACGCGGCGC TCGCGCTGTCGCTCGCCAAGCGCGCGCGCGAGCTCGCGCTCGGCCTGCCCGGCCTCCTGTACCTGCATTTCAGTGAAAGA AACTGGCAGCGGCGGCGCGCGCCGCAGCCGATCGCCGACTGA
Upstream 100 bases:
>100_bases GCCCGTGGAAACGCTTCGTGTCGAACATGAAGGACGCGATCGCGTACTTCGGCTTCCGTCAGGTATTCAAGCAAACGGCC GCTCGCCGCTCGCCGCGCTC
Downstream 100 bases:
>100_bases TCCGGCGTGATGGTCGGCGCCCTTTGCGTGGAGAACTCATGCGAGCCATCATTCTTGCGGCGGGCTTAGGCCTGCGCCTG CAACTGCCTCCCGAGGCTCA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 333; Mature: 332
Protein sequence:
>333_residues MTRTGMILLSLGTAAFVALLAWQGLGAVAATLASAGWGLALVAAFHLVPLVIDATAIAVMFRPGEPGSRLGEALRARWVG EAVNSLLPAGQIGGPVLMVRYLAQRGARLADAAAAITVSTTMQALAQMVFALVGIAAFSAYATHDAAAHLRTPALIATAV LGGCAALFYCAQRRGLFGRGLRAASTLLGPRDWSSLATRADAIDHALDRLYRERAKVRATFVLSFVGWIVGTAEVWLALR FLGHPVSWLDALLLESVGQAIRGAAFAIPGSLGAQEGGYLLLAPLVGLPPDAALALSLAKRARELALGLPGLLYLHFSER NWQRRRAPQPIAD
Sequences:
>Translated_333_residues MTRTGMILLSLGTAAFVALLAWQGLGAVAATLASAGWGLALVAAFHLVPLVIDATAIAVMFRPGEPGSRLGEALRARWVG EAVNSLLPAGQIGGPVLMVRYLAQRGARLADAAAAITVSTTMQALAQMVFALVGIAAFSAYATHDAAAHLRTPALIATAV LGGCAALFYCAQRRGLFGRGLRAASTLLGPRDWSSLATRADAIDHALDRLYRERAKVRATFVLSFVGWIVGTAEVWLALR FLGHPVSWLDALLLESVGQAIRGAAFAIPGSLGAQEGGYLLLAPLVGLPPDAALALSLAKRARELALGLPGLLYLHFSER NWQRRRAPQPIAD >Mature_332_residues TRTGMILLSLGTAAFVALLAWQGLGAVAATLASAGWGLALVAAFHLVPLVIDATAIAVMFRPGEPGSRLGEALRARWVGE AVNSLLPAGQIGGPVLMVRYLAQRGARLADAAAAITVSTTMQALAQMVFALVGIAAFSAYATHDAAAHLRTPALIATAVL GGCAALFYCAQRRGLFGRGLRAASTLLGPRDWSSLATRADAIDHALDRLYRERAKVRATFVLSFVGWIVGTAEVWLALRF LGHPVSWLDALLLESVGQAIRGAAFAIPGSLGAQEGGYLLLAPLVGLPPDAALALSLAKRARELALGLPGLLYLHFSERN WQRRRAPQPIAD
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 34939; Mature: 34808
Theoretical pI: Translated: 10.91; Mature: 10.91
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 2.4 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 2.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTRTGMILLSLGTAAFVALLAWQGLGAVAATLASAGWGLALVAAFHLVPLVIDATAIAVM CCCCCEEEEHHHHHHHHHHHHHCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHEEE FRPGEPGSRLGEALRARWVGEAVNSLLPAGQIGGPVLMVRYLAQRGARLADAAAAITVST ECCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHCCCHHHHHHHHHHHHH TMQALAQMVFALVGIAAFSAYATHDAAAHLRTPALIATAVLGGCAALFYCAQRRGLFGRG HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHCCCHHCC LRAASTLLGPRDWSSLATRADAIDHALDRLYRERAKVRATFVLSFVGWIVGTAEVWLALR HHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH FLGHPVSWLDALLLESVGQAIRGAAFAIPGSLGAQEGGYLLLAPLVGLPPDAALALSLAK HHCCCHHHHHHHHHHHHHHHHCCCHHCCCCCCCCCCCCEEEEECCCCCCCHHHHHHHHHH RARELALGLPGLLYLHFSERNWQRRRAPQPIAD HHHHHHHCCCCEEEEEECCCCHHHHCCCCCCCC >Mature Secondary Structure TRTGMILLSLGTAAFVALLAWQGLGAVAATLASAGWGLALVAAFHLVPLVIDATAIAVM CCCCEEEEHHHHHHHHHHHHHCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHEEE FRPGEPGSRLGEALRARWVGEAVNSLLPAGQIGGPVLMVRYLAQRGARLADAAAAITVST ECCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHCCCHHHHHHHHHHHHH TMQALAQMVFALVGIAAFSAYATHDAAAHLRTPALIATAVLGGCAALFYCAQRRGLFGRG HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHCCCHHCC LRAASTLLGPRDWSSLATRADAIDHALDRLYRERAKVRATFVLSFVGWIVGTAEVWLALR HHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH FLGHPVSWLDALLLESVGQAIRGAAFAIPGSLGAQEGGYLLLAPLVGLPPDAALALSLAK HHCCCHHHHHHHHHHHHHHHHCCCHHCCCCCCCCCCCCEEEEECCCCCCCHHHHHHHHHH RARELALGLPGLLYLHFSERNWQRRRAPQPIAD HHHHHHHCCCCEEEEEECCCCHHHHCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA