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The map label for this gene is mmsR [H]

Identifier: 53721474

GI number: 53721474

Start: 598494

End: 599396

Strand: Reverse

Name: mmsR [H]

Synonym: BPSS0436

Alternate gene names: 53721474

Gene position: 599396-598494 (Counterclockwise)

Preceding gene: 53721475

Following gene: 53721472

Centisome position: 18.89

GC content: 70.43

Gene sequence:

>903_bases
ATGAGCTCGCCCGCACGCCATTCGCCGCCGCAAACGATCACGAAGGACTCGCTCGGCTGCACGTCGAGCGGCTTTCTGAC
GGATATCGAACGCGAAACGGCGCTCTTGCGCTTCTATCGGAAACACACGACGGGCCTGCGCCTCGAGCAGGTCTCGACAC
CCGCGTCCGGGCGCGGCGTGCTGATCGGCATCTCGCTGTCCGGCGGCCATCGCCGCAAGATCCTCCGCGGCCGCCGGTCG
GTGACGCACGACTTCCGCGCCGATTCGGTCTACGTGCGCGATTTCTCCGAAGACTATCGCGCGGACATGATGTCGGATTT
CGACTTCGCGCTCGTCGAGCTGTCGCCGTCGTTCATCGACGGCCTCGCCGAGCGCGGCCGCCCGGCGCGCATCGCCGGCG
TCGCGCCGACGCTCGCGCACGACGACCGCCTGCTCGGCGAGCTCGGGCGCGCGCTCGCGCTCGCGCTGCAGTCGGGCGAC
GCGGCCGATGCCATGCTCGTCGATCAATTGGGCATCGCGATCGGCACGCACGCGATGCACGCGTACGGCGGCCTGCGCGC
CGACGAGACGAAGCAGCGGCGGCGCCTGTCGGCGCCGCTCGAGCGGCGCGCGAAGGAGATGCTGGCGGCGGGCGCGACGT
CGGTGGACGAAATCGCGCGTGCATGCCGCGTGTCGCGCGGCTACTTCATCAACGCGTTCAGCGCGACGACGGGCAAGACG
CCGCATCAGTGGCTGATCGAGCAACGCATCGAAGCGGCGAAGCGTCTGCTCGCGCACGGCGACTGGACGCTCGCGCGCAT
CGCCGAGCATTGCGGCTTCTCGAGCCAGAGCCATTTCACGCAGAGCTTCGCGAAGGCCATCGGCCTGCCGCCCGGCGCGT
GGCGCCGGCGCGCGCGCGCCTGA

Upstream 100 bases:

>100_bases
TGCGTCTGCGCGCGGCGAGTGCCGATGCGGCGCGCCGCCGTATGCCGCGCGCGGGCGAGCGCTCGCGTCACGTCCCGCCC
ACCGCTTCCGGAACTGTTCC

Downstream 100 bases:

>100_bases
TCCGGCCGGGCGTGCGGCCACGCGCGCGCATCGCCCCGCGTGCGAGCGAGCGTTTCGGCTATGGGCGGTTCACACGGCGC
CACGCGGCGGGCGGCGTGCC

Product: AraC family transcription regulator

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 300; Mature: 299

Protein sequence:

>300_residues
MSSPARHSPPQTITKDSLGCTSSGFLTDIERETALLRFYRKHTTGLRLEQVSTPASGRGVLIGISLSGGHRRKILRGRRS
VTHDFRADSVYVRDFSEDYRADMMSDFDFALVELSPSFIDGLAERGRPARIAGVAPTLAHDDRLLGELGRALALALQSGD
AADAMLVDQLGIAIGTHAMHAYGGLRADETKQRRRLSAPLERRAKEMLAAGATSVDEIARACRVSRGYFINAFSATTGKT
PHQWLIEQRIEAAKRLLAHGDWTLARIAEHCGFSSQSHFTQSFAKAIGLPPGAWRRRARA

Sequences:

>Translated_300_residues
MSSPARHSPPQTITKDSLGCTSSGFLTDIERETALLRFYRKHTTGLRLEQVSTPASGRGVLIGISLSGGHRRKILRGRRS
VTHDFRADSVYVRDFSEDYRADMMSDFDFALVELSPSFIDGLAERGRPARIAGVAPTLAHDDRLLGELGRALALALQSGD
AADAMLVDQLGIAIGTHAMHAYGGLRADETKQRRRLSAPLERRAKEMLAAGATSVDEIARACRVSRGYFINAFSATTGKT
PHQWLIEQRIEAAKRLLAHGDWTLARIAEHCGFSSQSHFTQSFAKAIGLPPGAWRRRARA
>Mature_299_residues
SSPARHSPPQTITKDSLGCTSSGFLTDIERETALLRFYRKHTTGLRLEQVSTPASGRGVLIGISLSGGHRRKILRGRRSV
THDFRADSVYVRDFSEDYRADMMSDFDFALVELSPSFIDGLAERGRPARIAGVAPTLAHDDRLLGELGRALALALQSGDA
ADAMLVDQLGIAIGTHAMHAYGGLRADETKQRRRLSAPLERRAKEMLAAGATSVDEIARACRVSRGYFINAFSATTGKTP
HQWLIEQRIEAAKRLLAHGDWTLARIAEHCGFSSQSHFTQSFAKAIGLPPGAWRRRARA

Specific function: Regulatory protein for the mmsAB operon. Activates the transcription of the mmsAB genes [H]

COG id: COG2207

COG function: function code K; AraC-type DNA-binding domain-containing proteins

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HTH araC/xylS-type DNA-binding domain [H]

Homologues:

None

Paralogues:

None

Copy number: 10-20 Molecules/Cell [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR009057
- InterPro:   IPR012287
- InterPro:   IPR003313
- InterPro:   IPR018062
- InterPro:   IPR020449
- InterPro:   IPR018060 [H]

Pfam domain/function: PF02311 AraC_binding; PF00165 HTH_AraC [H]

EC number: NA

Molecular weight: Translated: 32878; Mature: 32747

Theoretical pI: Translated: 10.56; Mature: 10.56

Prosite motif: PS00041 HTH_ARAC_FAMILY_1 ; PS01124 HTH_ARAC_FAMILY_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSSPARHSPPQTITKDSLGCTSSGFLTDIERETALLRFYRKHTTGLRLEQVSTPASGRGV
CCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCEEECCCCCCCCCEE
LIGISLSGGHRRKILRGRRSVTHDFRADSVYVRDFSEDYRADMMSDFDFALVELSPSFID
EEEEEECCCHHHHHHHHHHHHHHCCCCCEEEEECCHHHHHHHHHCCCCEEEEECCHHHHH
GLAERGRPARIAGVAPTLAHDDRLLGELGRALALALQSGDAADAMLVDQLGIAIGTHAMH
HHHHCCCCCEEECCCCHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHH
AYGGLRADETKQRRRLSAPLERRAKEMLAAGATSVDEIARACRVSRGYFINAFSATTGKT
HHCCCCCHHHHHHHHHCCHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCEEEEECCCCCCC
PHQWLIEQRIEAAKRLLAHGDWTLARIAEHCGFSSQSHFTQSFAKAIGLPPGAWRRRARA
HHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCHHHHHHCCC
>Mature Secondary Structure 
SSPARHSPPQTITKDSLGCTSSGFLTDIERETALLRFYRKHTTGLRLEQVSTPASGRGV
CCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCEEECCCCCCCCCEE
LIGISLSGGHRRKILRGRRSVTHDFRADSVYVRDFSEDYRADMMSDFDFALVELSPSFID
EEEEEECCCHHHHHHHHHHHHHHCCCCCEEEEECCHHHHHHHHHCCCCEEEEECCHHHHH
GLAERGRPARIAGVAPTLAHDDRLLGELGRALALALQSGDAADAMLVDQLGIAIGTHAMH
HHHHCCCCCEEECCCCHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHH
AYGGLRADETKQRRRLSAPLERRAKEMLAAGATSVDEIARACRVSRGYFINAFSATTGKT
HHCCCCCHHHHHHHHHCCHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCEEEEECCCCCCC
PHQWLIEQRIEAAKRLLAHGDWTLARIAEHCGFSSQSHFTQSFAKAIGLPPGAWRRRARA
HHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Protein + DNA = Protein-DNA [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 1339433; 10984043 [H]