| Definition | Burkholderia pseudomallei K96243 chromosome 2, complete sequence. |
|---|---|
| Accession | NC_006351 |
| Length | 3,173,005 |
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The map label for this gene is 53721454
Identifier: 53721454
GI number: 53721454
Start: 573892
End: 574536
Strand: Reverse
Name: 53721454
Synonym: BPSS0416
Alternate gene names: NA
Gene position: 574536-573892 (Counterclockwise)
Preceding gene: 53721469
Following gene: 53721453
Centisome position: 18.11
GC content: 66.82
Gene sequence:
>645_bases ATGCCCGTGCGTCTACTGGTATCGCTCTGGATCATCGTGCTATGCGGTTGCTCGACGTCGATGCAAGGCCTCGCCGACGT GGCCCGCGTCTATTGGGGCGGCGGCAACCATCAGGTCGCGCGCACGGCGCTCGATGCGCGCTATCGCTATCTGCGCATCT CCGTTCGCGGCCGCGCGACGTTGATGATTCTCGGCTACGTCGATCGCGATCCGCTCGGGCCGATCGAGATTTGGTATAGC GGGCACGGCAAGGAAACGCTGCGCCTGCAGAATGGACGCGTAGTCGGCGGCACGGGGCTGCCCGTCGAATGGACGAGCGT GCAGTTGTCCGCGCAGCCGGCATGGCGCAGCCTCTCCGGCGCCGCGACCATCGAACGACGCCGCGACGTCATGCCCGGCT ACGCGTACGGGCTCACGGACACGCTCACCGTCACGCCGATCCCCATGCCCCGCGGCACCGCCTATTTCGGACAGCCCGAT CCCGGCTTGCGCTGGTTCGTCGAATCGTCGACCGGCGCGGCGCCGCTGCCGCCCGCACGCTATGCGACGCGAACGGTCGG CAACGCCACGACAGTCGTCTACGGCGAGCAATGCCTGGACAAGACGTTTTGCCTCAGTTGGCAACGCTGGCCGGTGAATT CCTAG
Upstream 100 bases:
>100_bases ACGGGCACCCACTGAAAGCGCCCGGCTCGCCTCGGACGAAGGGCCCCAACGGGGCCCTTCGCTTATGCACACATGGAAAA CACCGCCCTCTCCTTTCACC
Downstream 100 bases:
>100_bases CATGCCGAAGCGTGAGGCGACGGGCCGCAAGCGGCGCGGCGGCACATGGCTGGCCGTCGTGCTCGCATGCGCCCGTCCTT TCGACGCCGCCGCGCACGTC
Product: lipoprotein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 214; Mature: 213
Protein sequence:
>214_residues MPVRLLVSLWIIVLCGCSTSMQGLADVARVYWGGGNHQVARTALDARYRYLRISVRGRATLMILGYVDRDPLGPIEIWYS GHGKETLRLQNGRVVGGTGLPVEWTSVQLSAQPAWRSLSGAATIERRRDVMPGYAYGLTDTLTVTPIPMPRGTAYFGQPD PGLRWFVESSTGAAPLPPARYATRTVGNATTVVYGEQCLDKTFCLSWQRWPVNS
Sequences:
>Translated_214_residues MPVRLLVSLWIIVLCGCSTSMQGLADVARVYWGGGNHQVARTALDARYRYLRISVRGRATLMILGYVDRDPLGPIEIWYS GHGKETLRLQNGRVVGGTGLPVEWTSVQLSAQPAWRSLSGAATIERRRDVMPGYAYGLTDTLTVTPIPMPRGTAYFGQPD PGLRWFVESSTGAAPLPPARYATRTVGNATTVVYGEQCLDKTFCLSWQRWPVNS >Mature_213_residues PVRLLVSLWIIVLCGCSTSMQGLADVARVYWGGGNHQVARTALDARYRYLRISVRGRATLMILGYVDRDPLGPIEIWYSG HGKETLRLQNGRVVGGTGLPVEWTSVQLSAQPAWRSLSGAATIERRRDVMPGYAYGLTDTLTVTPIPMPRGTAYFGQPDP GLRWFVESSTGAAPLPPARYATRTVGNATTVVYGEQCLDKTFCLSWQRWPVNS
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 23575; Mature: 23444
Theoretical pI: Translated: 9.75; Mature: 9.75
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.9 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 4.2 %Cys+Met (Translated Protein) 1.9 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 3.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPVRLLVSLWIIVLCGCSTSMQGLADVARVYWGGGNHQVARTALDARYRYLRISVRGRAT CCHHHHHHHHHHHHHCCCCCHHHHHHHHHHEECCCCCHHHHHHHHCCEEEEEEEECCCEE LMILGYVDRDPLGPIEIWYSGHGKETLRLQNGRVVGGTGLPVEWTSVQLSAQPAWRSLSG EEEEEECCCCCCCCEEEEECCCCCEEEEEECCEEECCCCCCEEEEEEEEECCCCCCCCCC AATIERRRDVMPGYAYGLTDTLTVTPIPMPRGTAYFGQPDPGLRWFVESSTGAAPLPPAR CHHHHHHHCCCCCEEECCCCEEEEECCCCCCCCEECCCCCCCEEEEEECCCCCCCCCCCH YATRTVGNATTVVYGEQCLDKTFCLSWQRWPVNS HHHHCCCCEEEEEECHHHHCHHHHCCEECCCCCC >Mature Secondary Structure PVRLLVSLWIIVLCGCSTSMQGLADVARVYWGGGNHQVARTALDARYRYLRISVRGRAT CHHHHHHHHHHHHHCCCCCHHHHHHHHHHEECCCCCHHHHHHHHCCEEEEEEEECCCEE LMILGYVDRDPLGPIEIWYSGHGKETLRLQNGRVVGGTGLPVEWTSVQLSAQPAWRSLSG EEEEEECCCCCCCCEEEEECCCCCEEEEEECCEEECCCCCCEEEEEEEEECCCCCCCCCC AATIERRRDVMPGYAYGLTDTLTVTPIPMPRGTAYFGQPDPGLRWFVESSTGAAPLPPAR CHHHHHHHCCCCCEEECCCCEEEEECCCCCCCCEECCCCCCCEEEEEECCCCCCCCCCCH YATRTVGNATTVVYGEQCLDKTFCLSWQRWPVNS HHHHCCCCEEEEEECHHHHCHHHHCCEECCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA