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The map label for this gene is 53721403

Identifier: 53721403

GI number: 53721403

Start: 507869

End: 508564

Strand: Reverse

Name: 53721403

Synonym: BPSS0368

Alternate gene names: NA

Gene position: 508564-507869 (Counterclockwise)

Preceding gene: 53721404

Following gene: 53721402

Centisome position: 16.03

GC content: 70.83

Gene sequence:

>696_bases
ATGAATCCCCGCATCGTCACCGCTGCCGTGACGGTTCTCGCCGGACACGCGCTCCTGCTGACCGGCGCGCTGCTGATGCG
CAACGACGTGCCGCACCGTCCGCTCGAATCGAAGACGATCACCGCTCAGTTGCTGAGCGCGCCCGTTGCGCAGCCGGCCG
GCATCCAGTCGGCGCCCGCGCCCACGCCGCCCCAGCCCGTTCCGAAGGCCAAGCCGAAGCCGGCGCCGACGCCCGTCCCC
CGGCCCGTCGCGAAGTCGAGCCGGACCCCAATGCCCGTCACGCACGAGCCCGCGCCGAATGCGATCACCGCGCCGGAACC
CGCGCCTGCCGCGCCCGTTGCGCCCGCCGAAACGAGCGCGAAGGCCGCGCCGCCCGCGGGCGCACCGACGAACCGCCCGA
CAATGGAAATCGTCGCGCCGAAGGAAGGCGCACACCTGAGCTGCCAGATCGCGAAGGCCGCCTATCCGTCGATGTCGAAG
CGGCGCGGCGAAACGGGGGTCGTGAAGGTCCGCTTCGTCGTCGGCCTGACGGGCAAGATCGAGAGCGCGCAGGTCGTCCA
GAGCAGCGGCTTCGCGCGTCTGGACGATGCCGCGCTCGACGCGATCCGCTCGTCGCCGTGCCAGCCGTATCTGCAGAACG
GGCAGCCGATGCGCGCCGCCTACACGCAGCCTTATGACTTCACTCTGACCGATTAA

Upstream 100 bases:

>100_bases
CAGCACTTCGCGGCGCGCCTCGCGCACGCCGCCGCGCTACGAAGCTAACATGCAGGTTTCGAATTCCCTGCCGGGCGCAT
CCGCGCCGGCCTTCTCCCGT

Downstream 100 bases:

>100_bases
TCTCGGCAATACCGAAAGAAACAACAAGGAAAGGAAATGCAAAGCTACGGAATCGCGCACGTGTGGGCGCAAGGTGACTT
CGTTACGCGCTTCATCGCGA

Product: TonB-like transport protein

Products: NA

Alternate protein names: NB Protein; NB Domain Protein; NB Like Protein; NB-Like Protein; Periplasmic Protein nB

Number of amino acids: Translated: 231; Mature: 231

Protein sequence:

>231_residues
MNPRIVTAAVTVLAGHALLLTGALLMRNDVPHRPLESKTITAQLLSAPVAQPAGIQSAPAPTPPQPVPKAKPKPAPTPVP
RPVAKSSRTPMPVTHEPAPNAITAPEPAPAAPVAPAETSAKAAPPAGAPTNRPTMEIVAPKEGAHLSCQIAKAAYPSMSK
RRGETGVVKVRFVVGLTGKIESAQVVQSSGFARLDDAALDAIRSSPCQPYLQNGQPMRAAYTQPYDFTLTD

Sequences:

>Translated_231_residues
MNPRIVTAAVTVLAGHALLLTGALLMRNDVPHRPLESKTITAQLLSAPVAQPAGIQSAPAPTPPQPVPKAKPKPAPTPVP
RPVAKSSRTPMPVTHEPAPNAITAPEPAPAAPVAPAETSAKAAPPAGAPTNRPTMEIVAPKEGAHLSCQIAKAAYPSMSK
RRGETGVVKVRFVVGLTGKIESAQVVQSSGFARLDDAALDAIRSSPCQPYLQNGQPMRAAYTQPYDFTLTD
>Mature_231_residues
MNPRIVTAAVTVLAGHALLLTGALLMRNDVPHRPLESKTITAQLLSAPVAQPAGIQSAPAPTPPQPVPKAKPKPAPTPVP
RPVAKSSRTPMPVTHEPAPNAITAPEPAPAAPVAPAETSAKAAPPAGAPTNRPTMEIVAPKEGAHLSCQIAKAAYPSMSK
RRGETGVVKVRFVVGLTGKIESAQVVQSSGFARLDDAALDAIRSSPCQPYLQNGQPMRAAYTQPYDFTLTD

Specific function: Unknown

COG id: COG0810

COG function: function code M; Periplasmic protein TonB, links inner and outer membranes

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 23964; Mature: 23964

Theoretical pI: Translated: 10.42; Mature: 10.42

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
3.5 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
3.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNPRIVTAAVTVLAGHALLLTGALLMRNDVPHRPLESKTITAQLLSAPVAQPAGIQSAPA
CCCEEHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCC
PTPPQPVPKAKPKPAPTPVPRPVAKSSRTPMPVTHEPAPNAITAPEPAPAAPVAPAETSA
CCCCCCCCCCCCCCCCCCCCCCCHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
KAAPPAGAPTNRPTMEIVAPKEGAHLSCQIAKAAYPSMSKRRGETGVVKVRFVVGLTGKI
CCCCCCCCCCCCCEEEEECCCCCCEEEEEEHHHHCCCHHHHCCCCCEEEEEEEEEECCCC
ESAQVVQSSGFARLDDAALDAIRSSPCQPYLQNGQPMRAAYTQPYDFTLTD
CHHHHHHHCCCCCHHHHHHHHHHCCCCCHHHHCCCCCEEECCCCCEEEECC
>Mature Secondary Structure
MNPRIVTAAVTVLAGHALLLTGALLMRNDVPHRPLESKTITAQLLSAPVAQPAGIQSAPA
CCCEEHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCC
PTPPQPVPKAKPKPAPTPVPRPVAKSSRTPMPVTHEPAPNAITAPEPAPAAPVAPAETSA
CCCCCCCCCCCCCCCCCCCCCCCHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
KAAPPAGAPTNRPTMEIVAPKEGAHLSCQIAKAAYPSMSKRRGETGVVKVRFVVGLTGKI
CCCCCCCCCCCCCEEEEECCCCCCEEEEEEHHHHCCCHHHHCCCCCEEEEEEEEEECCCC
ESAQVVQSSGFARLDDAALDAIRSSPCQPYLQNGQPMRAAYTQPYDFTLTD
CHHHHHHHCCCCCHHHHHHHHHHCCCCCHHHHCCCCCEEECCCCCEEEECC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA