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The map label for this gene is yhiR [C]

Identifier: 53721387

GI number: 53721387

Start: 492322

End: 493167

Strand: Reverse

Name: yhiR [C]

Synonym: BPSS0352

Alternate gene names: 53721387

Gene position: 493167-492322 (Counterclockwise)

Preceding gene: 53721388

Following gene: 53721378

Centisome position: 15.54

GC content: 59.93

Gene sequence:

>846_bases
ATGCTCAGCTATCGTCACGGCTTTCACGCCGGCAATCACGCGGACGTCCTCAAGCACACCGTCGTCGTGCAGTTGCTGCG
TTATTTGAACAAGAAAGACAAGTCGTATTGGTACATCGACACGCACGCGGGCGCAGGCGTCTATTCGCTCTTCGACGGCT
ATGCGGCGAAAACCGGTGAATTCGGCACGGGGATCGAGAAAATCTGGGATGCAACGGATCTGCCCGAAGCACTGTCCGAC
TATGTCGACGAAGTGCGCGCGCTGAACCGCGACGGCGAATTGCGCTACTACCCGGGCTCGCCTTATCTTGCGTGGCGACT
GATGCGAGAACAGGACCGGATGCGTCTGTTCGAGCTTCACAGTACCGAAATCGATGTGCTGCGCCACAATTTCCGCGATG
CGGGGCGGCGCGCGATGATTTACGCCGGCGACGGCTTCGAAGGCATCAAGGCGCTGCTGCCGCCGCCGCCGCGGCGCGCG
CTCGTGTTGGTGGATCCGTCATACGAGGACAAGCGCGATTACGCGAAAACGACCGCCTGCGTCGAAGAAAGCCTGAAGCG
ATTCGCGACGGGGTGCTATGCAATCTGGTATCCGCAGGTGAGCCGGCCCGAATCGCAGAAATTCCCCGACCATCTGAAGC
AGTTGCAGCCGAACAACTGGCTGCATCTGAGCTTGACCGTGAGCCGGCCGCCATCGGACGGCTTTGGTCTTTTCGGCAGC
GGGATGTTCATTCTCAACCCGCCGTATACGTTGGTCGATACGATGAAAGAGGCACTCCCCTATCTCGTCGAAGCGCTTGG
CCAGGACAGCGGCGCGAAATTCGCGATCGAGCACCGCGCCAACTGA

Upstream 100 bases:

>100_bases
GCCGCGTCGGTCGGCCATGTCCACGAGTCGGCATCGCCGCATGAGTCACGCCCCCGACGCCCGGCCGACTTTCACGTACC
GCTTCCGTATTTCTCTCGCC

Downstream 100 bases:

>100_bases
CCGGGGCGCCGCTTATTGACGCGGCGGGGGCGCTTTGAGCGGAACCGCGGAGCCCGGCACTTCGATATACGGGATGACGA
CCATCGGCGCAGTGGAGCCC

Product: hypothetical protein

Products: NA

Alternate protein names: ORFJ [H]

Number of amino acids: Translated: 281; Mature: 281

Protein sequence:

>281_residues
MLSYRHGFHAGNHADVLKHTVVVQLLRYLNKKDKSYWYIDTHAGAGVYSLFDGYAAKTGEFGTGIEKIWDATDLPEALSD
YVDEVRALNRDGELRYYPGSPYLAWRLMREQDRMRLFELHSTEIDVLRHNFRDAGRRAMIYAGDGFEGIKALLPPPPRRA
LVLVDPSYEDKRDYAKTTACVEESLKRFATGCYAIWYPQVSRPESQKFPDHLKQLQPNNWLHLSLTVSRPPSDGFGLFGS
GMFILNPPYTLVDTMKEALPYLVEALGQDSGAKFAIEHRAN

Sequences:

>Translated_281_residues
MLSYRHGFHAGNHADVLKHTVVVQLLRYLNKKDKSYWYIDTHAGAGVYSLFDGYAAKTGEFGTGIEKIWDATDLPEALSD
YVDEVRALNRDGELRYYPGSPYLAWRLMREQDRMRLFELHSTEIDVLRHNFRDAGRRAMIYAGDGFEGIKALLPPPPRRA
LVLVDPSYEDKRDYAKTTACVEESLKRFATGCYAIWYPQVSRPESQKFPDHLKQLQPNNWLHLSLTVSRPPSDGFGLFGS
GMFILNPPYTLVDTMKEALPYLVEALGQDSGAKFAIEHRAN
>Mature_281_residues
MLSYRHGFHAGNHADVLKHTVVVQLLRYLNKKDKSYWYIDTHAGAGVYSLFDGYAAKTGEFGTGIEKIWDATDLPEALSD
YVDEVRALNRDGELRYYPGSPYLAWRLMREQDRMRLFELHSTEIDVLRHNFRDAGRRAMIYAGDGFEGIKALLPPPPRRA
LVLVDPSYEDKRDYAKTTACVEESLKRFATGCYAIWYPQVSRPESQKFPDHLKQLQPNNWLHLSLTVSRPPSDGFGLFGS
GMFILNPPYTLVDTMKEALPYLVEALGQDSGAKFAIEHRAN

Specific function: Unknown

COG id: COG2961

COG function: function code R; Protein involved in catabolism of external DNA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: To E.coli yhiR [H]

Homologues:

Organism=Escherichia coli, GI1789914, Length=262, Percent_Identity=48.0916030534351, Blast_Score=249, Evalue=2e-67,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR007473 [H]

Pfam domain/function: PF04378 DUF519 [H]

EC number: NA

Molecular weight: Translated: 32038; Mature: 32038

Theoretical pI: Translated: 7.08; Mature: 7.08

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLSYRHGFHAGNHADVLKHTVVVQLLRYLNKKDKSYWYIDTHAGAGVYSLFDGYAAKTGE
CCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCCCHHHHHHCHHCCCCC
FGTGIEKIWDATDLPEALSDYVDEVRALNRDGELRYYPGSPYLAWRLMREQDRMRLFELH
CCCCHHHHHCCCCCHHHHHHHHHHHHHCCCCCCEEEECCCCHHHHHHHHHHHHHHHHHHC
STEIDVLRHNFRDAGRRAMIYAGDGFEGIKALLPPPPRRALVLVDPSYEDKRDYAKTTAC
CCHHHHHHHHHHHCCCEEEEEECCCHHHHHHCCCCCCCCEEEEECCCCCCHHHHHHHHHH
VEESLKRFATGCYAIWYPQVSRPESQKFPDHLKQLQPNNWLHLSLTVSRPPSDGFGLFGS
HHHHHHHHHCCEEEEECCCCCCCCCCCCHHHHHHCCCCCEEEEEEEECCCCCCCCCCCCC
GMFILNPPYTLVDTMKEALPYLVEALGQDSGAKFAIEHRAN
CEEEECCCHHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCC
>Mature Secondary Structure
MLSYRHGFHAGNHADVLKHTVVVQLLRYLNKKDKSYWYIDTHAGAGVYSLFDGYAAKTGE
CCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCCCHHHHHHCHHCCCCC
FGTGIEKIWDATDLPEALSDYVDEVRALNRDGELRYYPGSPYLAWRLMREQDRMRLFELH
CCCCHHHHHCCCCCHHHHHHHHHHHHHCCCCCCEEEECCCCHHHHHHHHHHHHHHHHHHC
STEIDVLRHNFRDAGRRAMIYAGDGFEGIKALLPPPPRRALVLVDPSYEDKRDYAKTTAC
CCHHHHHHHHHHHCCCEEEEEECCCHHHHHHCCCCCCCCEEEEECCCCCCHHHHHHHHHH
VEESLKRFATGCYAIWYPQVSRPESQKFPDHLKQLQPNNWLHLSLTVSRPPSDGFGLFGS
HHHHHHHHHCCEEEEECCCCCCCCCCCCHHHHHHCCCCCEEEEEEEECCCCCCCCCCCCC
GMFILNPPYTLVDTMKEALPYLVEALGQDSGAKFAIEHRAN
CEEEECCCHHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 1916268; 7542800; 10675023 [H]