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The map label for this gene is ycgA [H]

Identifier: 53721318

GI number: 53721318

Start: 378724

End: 380208

Strand: Reverse

Name: ycgA [H]

Synonym: BPSS0283

Alternate gene names: 53721318

Gene position: 380208-378724 (Counterclockwise)

Preceding gene: 53721319

Following gene: 53721316

Centisome position: 11.98

GC content: 69.02

Gene sequence:

>1485_bases
ATGCCCGATATGCCCGATATGTCCGATATGTCCGATATGCCCGACACGCGCGGCACGCCCGCGCACGACGCCTCGCCGCG
CCCCGAGCACAAGCCGCACGGCAAGATGCTGCATCCGGTCGTGATGATGATCTGGGTGCTCGCGGCCGCGGTCGCGCTCA
CGTGGCTCGTCGATTCCGGCCGCTACGCGCGCAACGGCAAGCTCGTCGTGCCGGGCACCTATCAGGTCGTGCCGAAGGCA
ACGTCGCTCGCGACGCTCGTCGCGCCCGCCGTCAGCAAGAGCACGCCGCAGCTCGCAATGCCCGCGAGCCTCGTGTCCGC
GTTCGTCGCGGTGCCGGGCGGGCTCGTGAAGAACGCGCCGCTCATCGTGATGGTGATGTTCGTCGGCGGCATGTTCGGCG
TGATGCGCAGGACAGGCGTCGTCGACGCGGGCATCGACCGGCTGCTGCAGCTCACCGGCAATGACGTCTATCTGCTGACG
CCGCTCCTGATGATCCTGATCGGGCTCGGCAGCACGCTGCTCGGCTTCATCTCCGAGTATCTGGTGATCATTCCGATGGT
GATGGTGATCGCGAAGCGGCTCGGGCTGTCGAACCTGTTCGCGGTCGCGCTCGTCGCGCTCGCCGCGAAGATCGGCTACA
TCGCGTCCGTCACGAATCCGCTCGCGCTCGCGGTCGCGCAGCCGCTCGTCGGCGTGCCGCTGTTCAGCGGCGTCGCGCTG
CGCGCCGCGGTGTTCGCCGTCTATCTGGCGCTCGGCATCCTCTATCTGCTGCATCACGTGAAGCGCAGCGGCTATCGGCG
CGAGCGCGCGAAGGCCCTCGCGCACGCGCACGGCGTCGCGCGCCTGTCGGTGCGCCACCAGGCGACGCTCGCGCTGCTCG
CGGCGGCGGTCGCGATGCTCGTCTTCGGCACGCGCGAGCTGAAGTGGGGCAACGTCGAGCTTGCCGCGTTCTACGCGTTC
GTCGCGATCGCGGCCGCCGCGATCGGCGGGCTCGACTCGCGCAGCGCGGCCGACGCGTTCGTCGACGGCATGAAGAGCAT
GATGCTCGCGGCGCTGCTGATGGGGCTCGCCGCGTCGGTCGAGTTGCTGCTGCAGAACAGCCTCGTGCTCGACACGCTGA
TCCATCTGTTCACCCGGCTCGCGAACGGCCAATCGCCGGTGTGGGTCGCGAACGGGCTGATGGCCGTGCAGATGGTGCTC
GACGTGTTCATTCCGTCGGTGTCGGGCAAGGCGGCCGTGAGCATGCCGATCATCGGGCCGATCGCGCAGCTATCCGGCGT
GAGCGGGCAGACCTCGGTGCTCGCGTTCGTGCTGGGCGGCGGGCTCACGAACCTCGTCACGCCGACCTCCGGCATGCTGC
TCGCGTATCTCGCGACCGCGCGCGTCGATTTCGGCGCGTGGCTGCGGTTCGTGCTGCCGCTGTTCGCCGTGCTGCTCGCG
CTGTCGTGCGGCGTGCTCGCGTTCGCCGTGCAGATCGGCTACTGA

Upstream 100 bases:

>100_bases
ACGTCCCGGCACGCGCCGCGCTGCAACCCGCATGAAAGCCCGCTCCCCCGCCGTGCTCGCCGCGCCCGCGCATTGCGCCG
ACACGCCTCGAACGCCCGAT

Downstream 100 bases:

>100_bases
CGGGCGCGCGGGCCGCTCAGCGCGCGACGGCGGCGGGCATTCGAGCGGCGGCCGAGGTCGTCGACGCGGCCGATGCCGAC
GATGCCGACGATGCCGCCGC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 494; Mature: 493

Protein sequence:

>494_residues
MPDMPDMSDMSDMPDTRGTPAHDASPRPEHKPHGKMLHPVVMMIWVLAAAVALTWLVDSGRYARNGKLVVPGTYQVVPKA
TSLATLVAPAVSKSTPQLAMPASLVSAFVAVPGGLVKNAPLIVMVMFVGGMFGVMRRTGVVDAGIDRLLQLTGNDVYLLT
PLLMILIGLGSTLLGFISEYLVIIPMVMVIAKRLGLSNLFAVALVALAAKIGYIASVTNPLALAVAQPLVGVPLFSGVAL
RAAVFAVYLALGILYLLHHVKRSGYRRERAKALAHAHGVARLSVRHQATLALLAAAVAMLVFGTRELKWGNVELAAFYAF
VAIAAAAIGGLDSRSAADAFVDGMKSMMLAALLMGLAASVELLLQNSLVLDTLIHLFTRLANGQSPVWVANGLMAVQMVL
DVFIPSVSGKAAVSMPIIGPIAQLSGVSGQTSVLAFVLGGGLTNLVTPTSGMLLAYLATARVDFGAWLRFVLPLFAVLLA
LSCGVLAFAVQIGY

Sequences:

>Translated_494_residues
MPDMPDMSDMSDMPDTRGTPAHDASPRPEHKPHGKMLHPVVMMIWVLAAAVALTWLVDSGRYARNGKLVVPGTYQVVPKA
TSLATLVAPAVSKSTPQLAMPASLVSAFVAVPGGLVKNAPLIVMVMFVGGMFGVMRRTGVVDAGIDRLLQLTGNDVYLLT
PLLMILIGLGSTLLGFISEYLVIIPMVMVIAKRLGLSNLFAVALVALAAKIGYIASVTNPLALAVAQPLVGVPLFSGVAL
RAAVFAVYLALGILYLLHHVKRSGYRRERAKALAHAHGVARLSVRHQATLALLAAAVAMLVFGTRELKWGNVELAAFYAF
VAIAAAAIGGLDSRSAADAFVDGMKSMMLAALLMGLAASVELLLQNSLVLDTLIHLFTRLANGQSPVWVANGLMAVQMVL
DVFIPSVSGKAAVSMPIIGPIAQLSGVSGQTSVLAFVLGGGLTNLVTPTSGMLLAYLATARVDFGAWLRFVLPLFAVLLA
LSCGVLAFAVQIGY
>Mature_493_residues
PDMPDMSDMSDMPDTRGTPAHDASPRPEHKPHGKMLHPVVMMIWVLAAAVALTWLVDSGRYARNGKLVVPGTYQVVPKAT
SLATLVAPAVSKSTPQLAMPASLVSAFVAVPGGLVKNAPLIVMVMFVGGMFGVMRRTGVVDAGIDRLLQLTGNDVYLLTP
LLMILIGLGSTLLGFISEYLVIIPMVMVIAKRLGLSNLFAVALVALAAKIGYIASVTNPLALAVAQPLVGVPLFSGVALR
AAVFAVYLALGILYLLHHVKRSGYRRERAKALAHAHGVARLSVRHQATLALLAAAVAMLVFGTRELKWGNVELAAFYAFV
AIAAAAIGGLDSRSAADAFVDGMKSMMLAALLMGLAASVELLLQNSLVLDTLIHLFTRLANGQSPVWVANGLMAVQMVLD
VFIPSVSGKAAVSMPIIGPIAQLSGVSGQTSVLAFVLGGGLTNLVTPTSGMLLAYLATARVDFGAWLRFVLPLFAVLLAL
SCGVLAFAVQIGY

Specific function: Unknown

COG id: COG1288

COG function: function code S; Predicted membrane protein

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: To E.coli yfcC and H.influenzae HI_0594 [H]

Homologues:

Organism=Escherichia coli, GI87082082, Length=401, Percent_Identity=30.1745635910224, Blast_Score=163, Evalue=3e-41,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR018387
- InterPro:   IPR018385 [H]

Pfam domain/function: PF03606 DcuC [H]

EC number: NA

Molecular weight: Translated: 51762; Mature: 51631

Theoretical pI: Translated: 10.22; Mature: 10.22

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.2 %Cys     (Translated Protein)
5.1 %Met     (Translated Protein)
5.3 %Cys+Met (Translated Protein)
0.2 %Cys     (Mature Protein)
4.9 %Met     (Mature Protein)
5.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure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HHHHHHHHHHHCCC
>Mature Secondary Structure 
PDMPDMSDMSDMPDTRGTPAHDASPRPEHKPHGKMLHPVVMMIWVLAAAVALTWLVDSG
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCC
RYARNGKLVVPGTYQVVPKATSLATLVAPAVSKSTPQLAMPASLVSAFVAVPGGLVKNAP
CCCCCCEEECCCCCEECCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCCHHCCCH
LIVMVMFVGGMFGVMRRTGVVDAGIDRLLQLTGNDVYLLTPLLMILIGLGSTLLGFISEY
HHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCEEHHHHHHHHHHHHHHHHHHHHHHH
LVIIPMVMVIAKRLGLSNLFAVALVALAAKIGYIASVTNPLALAVAQPLVGVPLFSGVAL
HHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCHHHHHHHH
RAAVFAVYLALGILYLLHHVKRSGYRRERAKALAHAHGVARLSVRHQATLALLAAAVAML
HHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
VFGTRELKWGNVELAAFYAFVAIAAAAIGGLDSRSAADAFVDGMKSMMLAALLMGLAASV
HHCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
ELLLQNSLVLDTLIHLFTRLANGQSPVWVANGLMAVQMVLDVFIPSVSGKAAVSMPIIGP
HHHHHHHHHHHHHHHHHHHHHCCCCCEEHHHHHHHHHHHHHHHHCCCCCCCEEECCCHHH
IAQLSGVSGQTSVLAFVLGGGLTNLVTPTSGMLLAYLATARVDFGAWLRFVLPLFAVLLA
HHHHCCCCCHHHHHHHHHHCCHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LSCGVLAFAVQIGY
HHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 8969502; 9384377 [H]