Definition Burkholderia pseudomallei K96243 chromosome 2, complete sequence.
Accession NC_006351
Length 3,173,005

Click here to switch to the map view.

The map label for this gene is 53721222

Identifier: 53721222

GI number: 53721222

Start: 249406

End: 251322

Strand: Reverse

Name: 53721222

Synonym: BPSS0186

Alternate gene names: NA

Gene position: 251322-249406 (Counterclockwise)

Preceding gene: 53721223

Following gene: 53721210

Centisome position: 7.92

GC content: 66.2

Gene sequence:

>1917_bases
ATGACGAAACGAATCCATGCCGTGCTCCTCGCCGCCTTGCTGATCGCGGCGCTCGCGCCGCCATGCCAGGCCCGCTCCAG
CACCGATTGGCTCGCGAACACGTTCGCGACCGACGCCATGCATGTGGGCAACGCCGCGCGTTCGATGTGGGTTGCGCCGG
AAGGCGTCATTTACACGGCCTCCATGTGGGACGAGAACGAGGGTGGTGTCGCGCTCTACCAAAACGGCCGGAGCATCGGG
TCCATCGGCGCTCACAACGAGTTTCAGGGCGGCGCGATCACCGGCAACGCCGCTTCGATCTTCGCCGCGTTGCAGTTCAA
TCGCAACGGCGGCAGCGGCATGGTGGGACGGTACGACCGGACGACGCGCCGGCGCGATCTGCTCATTCCCGTCAGCGCGA
CGACAACCGAGCGGTGGGCCGACGTCGTCACCGGGCTCGCGACCTCGGGTTCGACGCTCTACGCGAGCGATTTTCCCGGA
AACCGTGTTCGGATCTACACGGTGGCCGGCGTCTGGCGGCGCGACATCGATATCTCCGAGCCCGGCGCGCTCGCGGCGGA
CAGCGCGGGCAACGTCTGGGTCGCGCAAAAGCGCGCGGGCGCGATCGCCGAATTCGATTCGGGCGGCAGGCTGCTGAACA
CGATCCGGATGGCCGCCGCGTCCCGGCCGTCCGCGCTCTACTTCGATGCGGCGACGCAGCGCCTCATGGTCGGCGACGAA
GGGCCGGACATGAACATCAAGATCTACGACGTCTCGCGCACGCCGGCCCTCGTCGGCACGTTCGGCGTGCGCGGCGGCTA
TCTCGATTCCGCGTCGGGAATCAAAGGCCAGGTTGGCGACAAACGATTCACGCGCGTCGCCGGCCTCGGCAAGGACGCCG
CCGGCAACCTGTACGTGCTGAACAACCCGTGGGGCGGCACGTGGGACCTCGGCCGCGACGGCGCCACGGACATCCACGCA
TACAGCCCTTCCGGCACCCTGCAATGGAAGCTCCAGTCCGTCAACTTCGAGGGAATCGCCGCGCCGGATTCGGGCACGGA
CGGCGCGTTCTTCTATAGCGGCACCAACGTCTACGCCGGCACCGCGGGCGGCACCTTCGTCGCGAACACCGTCGACCCGA
TCGACTACCCGATGGATCCGCGTATCGACGTGCGCGATCCGGCGCGCGGCGAACACTTCGGACAACTGGCCGCCATCGGC
TCGAATCGCATTCTCGCGGCAGGCAGCCAGAACCCCGACGTTTTCCATTTCTTCCACTTCAACGCCGCGCACGGCTACAT
CGCGATACCGGACGGCTCCATCCCGGGCGCCGCATTCGGCACGACGGCAAGGATCAGGGCCGGCTTTTGCCTCGACAGCC
GGGGAGGCGTATGGGCCGGCCTGGACAAGACGAACGCCATCTGGCACTACCCGCTGACCGGCTTCGACGCGAACGGCAAG
CCGGCGTGGGGGCCCGCCACGGTCACCCCCATTCCGAATTCGATCAAGCCGTTGACGCGGATCGTCTACCTGCCCGAGAG
CGACACCATGATTCTCGCGCGCGGCCGGCCCGTGGGCACGGACTGGACGGCGATCGGAACGAGGATCGAGGTATATCACG
GCTGGCTGGCGGGCAACACGGCCGCCCCCGATCCGGTGATCGGCCTGAGCAGCGCCAACCCGAAATCGATCACGGCGGCC
GGAAACTACCTCTTCGTCGGCTACGTGCACACGCAGCCCAACATCGACGCATTCAATCTCTCGACGGGCGCCCTGGCCGC
CACGCTGATCAACAGCAGTCCCGAACAAATTTACGTGGGTAACGACGTGGATTCGATGTACGGCCTGCGGTCCTACCTGC
GATCGAACGGCGAATACGTGATCACGAAAGACAATTACAACGCAGCCGGCATCGTCGTCTATCGCTGGACGCCTTGA

Upstream 100 bases:

>100_bases
CAATCACGCCGCTGTTTGAGCCAATGGCGTCGCGTGACGCAGCTATGCTGACTTCGGCCCGGACGCCCATGCCGGGCCAC
ACCAGGAAGCAACGCTCACC

Downstream 100 bases:

>100_bases
CGCCGCGCCGTCTTTCGCCGGCGCGCGGCGGAGCCCGCTTCGGCGCACGCGCATCGGCATCGGCATCGGCATCGGCGAGA
TCGTCCGGCGCGGCGGATTC

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 638; Mature: 637

Protein sequence:

>638_residues
MTKRIHAVLLAALLIAALAPPCQARSSTDWLANTFATDAMHVGNAARSMWVAPEGVIYTASMWDENEGGVALYQNGRSIG
SIGAHNEFQGGAITGNAASIFAALQFNRNGGSGMVGRYDRTTRRRDLLIPVSATTTERWADVVTGLATSGSTLYASDFPG
NRVRIYTVAGVWRRDIDISEPGALAADSAGNVWVAQKRAGAIAEFDSGGRLLNTIRMAAASRPSALYFDAATQRLMVGDE
GPDMNIKIYDVSRTPALVGTFGVRGGYLDSASGIKGQVGDKRFTRVAGLGKDAAGNLYVLNNPWGGTWDLGRDGATDIHA
YSPSGTLQWKLQSVNFEGIAAPDSGTDGAFFYSGTNVYAGTAGGTFVANTVDPIDYPMDPRIDVRDPARGEHFGQLAAIG
SNRILAAGSQNPDVFHFFHFNAAHGYIAIPDGSIPGAAFGTTARIRAGFCLDSRGGVWAGLDKTNAIWHYPLTGFDANGK
PAWGPATVTPIPNSIKPLTRIVYLPESDTMILARGRPVGTDWTAIGTRIEVYHGWLAGNTAAPDPVIGLSSANPKSITAA
GNYLFVGYVHTQPNIDAFNLSTGALAATLINSSPEQIYVGNDVDSMYGLRSYLRSNGEYVITKDNYNAAGIVVYRWTP

Sequences:

>Translated_638_residues
MTKRIHAVLLAALLIAALAPPCQARSSTDWLANTFATDAMHVGNAARSMWVAPEGVIYTASMWDENEGGVALYQNGRSIG
SIGAHNEFQGGAITGNAASIFAALQFNRNGGSGMVGRYDRTTRRRDLLIPVSATTTERWADVVTGLATSGSTLYASDFPG
NRVRIYTVAGVWRRDIDISEPGALAADSAGNVWVAQKRAGAIAEFDSGGRLLNTIRMAAASRPSALYFDAATQRLMVGDE
GPDMNIKIYDVSRTPALVGTFGVRGGYLDSASGIKGQVGDKRFTRVAGLGKDAAGNLYVLNNPWGGTWDLGRDGATDIHA
YSPSGTLQWKLQSVNFEGIAAPDSGTDGAFFYSGTNVYAGTAGGTFVANTVDPIDYPMDPRIDVRDPARGEHFGQLAAIG
SNRILAAGSQNPDVFHFFHFNAAHGYIAIPDGSIPGAAFGTTARIRAGFCLDSRGGVWAGLDKTNAIWHYPLTGFDANGK
PAWGPATVTPIPNSIKPLTRIVYLPESDTMILARGRPVGTDWTAIGTRIEVYHGWLAGNTAAPDPVIGLSSANPKSITAA
GNYLFVGYVHTQPNIDAFNLSTGALAATLINSSPEQIYVGNDVDSMYGLRSYLRSNGEYVITKDNYNAAGIVVYRWTP
>Mature_637_residues
TKRIHAVLLAALLIAALAPPCQARSSTDWLANTFATDAMHVGNAARSMWVAPEGVIYTASMWDENEGGVALYQNGRSIGS
IGAHNEFQGGAITGNAASIFAALQFNRNGGSGMVGRYDRTTRRRDLLIPVSATTTERWADVVTGLATSGSTLYASDFPGN
RVRIYTVAGVWRRDIDISEPGALAADSAGNVWVAQKRAGAIAEFDSGGRLLNTIRMAAASRPSALYFDAATQRLMVGDEG
PDMNIKIYDVSRTPALVGTFGVRGGYLDSASGIKGQVGDKRFTRVAGLGKDAAGNLYVLNNPWGGTWDLGRDGATDIHAY
SPSGTLQWKLQSVNFEGIAAPDSGTDGAFFYSGTNVYAGTAGGTFVANTVDPIDYPMDPRIDVRDPARGEHFGQLAAIGS
NRILAAGSQNPDVFHFFHFNAAHGYIAIPDGSIPGAAFGTTARIRAGFCLDSRGGVWAGLDKTNAIWHYPLTGFDANGKP
AWGPATVTPIPNSIKPLTRIVYLPESDTMILARGRPVGTDWTAIGTRIEVYHGWLAGNTAAPDPVIGLSSANPKSITAAG
NYLFVGYVHTQPNIDAFNLSTGALAATLINSSPEQIYVGNDVDSMYGLRSYLRSNGEYVITKDNYNAAGIVVYRWTP

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 67739; Mature: 67608

Theoretical pI: Translated: 6.92; Mature: 6.92

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
2.0 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
1.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTKRIHAVLLAALLIAALAPPCQARSSTDWLANTFATDAMHVGNAARSMWVAPEGVIYTA
CCCHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHCCHHHEEEECCCCEEEEE
SMWDENEGGVALYQNGRSIGSIGAHNEFQGGAITGNAASIFAALQFNRNGGSGMVGRYDR
EECCCCCCCEEEEECCCCCCCCCCCCCCCCCEEECCHHEEEEEEEECCCCCCCCCCCCCC
TTRRRDLLIPVSATTTERWADVVTGLATSGSTLYASDFPGNRVRIYTVAGVWRRDIDISE
CCCCCEEEEEECCCCHHHHHHHHHHHCCCCCEEEECCCCCCEEEEEEEECEEEECCCCCC
PGALAADSAGNVWVAQKRAGAIAEFDSGGRLLNTIRMAAASRPSALYFDAATQRLMVGDE
CCCEEECCCCCEEEEECCCCCEEEECCCCHHHHHHHHHHCCCCCEEEEECCCCEEEECCC
GPDMNIKIYDVSRTPALVGTFGVRGGYLDSASGIKGQVGDKRFTRVAGLGKDAAGNLYVL
CCCCEEEEEECCCCCEEEEECCCCCCCCCCCCCCCCCCCCHHHHHHHCCCCCCCCCEEEE
NNPWGGTWDLGRDGATDIHAYSPSGTLQWKLQSVNFEGIAAPDSGTDGAFFYSGTNVYAG
ECCCCCCCCCCCCCCCEEEEECCCCEEEEEEEEECCCEEECCCCCCCCEEEEECCEEEEE
TAGGTFVANTVDPIDYPMDPRIDVRDPARGEHFGQLAAIGSNRILAAGSQNPDVFHFFHF
CCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCCCEEEEECCCEEEEECCCCCCEEEEEEE
NAAHGYIAIPDGSIPGAAFGTTARIRAGFCLDSRGGVWAGLDKTNAIWHYPLTGFDANGK
ECCCCEEEECCCCCCCCCCCCCEEEEEEEEECCCCCEEECCCCCCCEEECCCCCCCCCCC
PAWGPATVTPIPNSIKPLTRIVYLPESDTMILARGRPVGTDWTAIGTRIEVYHGWLAGNT
CCCCCEEECCCCCCCCCEEEEEEECCCCCEEEECCCCCCCCHHHHCCEEEEEEEEEECCC
AAPDPVIGLSSANPKSITAAGNYLFVGYVHTQPNIDAFNLSTGALAATLINSSPEQIYVG
CCCCCEEEECCCCCCEEEECCCEEEEEEEECCCCCCEEECCCCCEEEEEECCCCCEEEEC
NDVDSMYGLRSYLRSNGEYVITKDNYNAAGIVVYRWTP
CCHHHHHHHHHHHHCCCCEEEECCCCCEEEEEEEEECC
>Mature Secondary Structure 
TKRIHAVLLAALLIAALAPPCQARSSTDWLANTFATDAMHVGNAARSMWVAPEGVIYTA
CCHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHCCHHHEEEECCCCEEEEE
SMWDENEGGVALYQNGRSIGSIGAHNEFQGGAITGNAASIFAALQFNRNGGSGMVGRYDR
EECCCCCCCEEEEECCCCCCCCCCCCCCCCCEEECCHHEEEEEEEECCCCCCCCCCCCCC
TTRRRDLLIPVSATTTERWADVVTGLATSGSTLYASDFPGNRVRIYTVAGVWRRDIDISE
CCCCCEEEEEECCCCHHHHHHHHHHHCCCCCEEEECCCCCCEEEEEEEECEEEECCCCCC
PGALAADSAGNVWVAQKRAGAIAEFDSGGRLLNTIRMAAASRPSALYFDAATQRLMVGDE
CCCEEECCCCCEEEEECCCCCEEEECCCCHHHHHHHHHHCCCCCEEEEECCCCEEEECCC
GPDMNIKIYDVSRTPALVGTFGVRGGYLDSASGIKGQVGDKRFTRVAGLGKDAAGNLYVL
CCCCEEEEEECCCCCEEEEECCCCCCCCCCCCCCCCCCCCHHHHHHHCCCCCCCCCEEEE
NNPWGGTWDLGRDGATDIHAYSPSGTLQWKLQSVNFEGIAAPDSGTDGAFFYSGTNVYAG
ECCCCCCCCCCCCCCCEEEEECCCCEEEEEEEEECCCEEECCCCCCCCEEEEECCEEEEE
TAGGTFVANTVDPIDYPMDPRIDVRDPARGEHFGQLAAIGSNRILAAGSQNPDVFHFFHF
CCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCCCEEEEECCCEEEEECCCCCCEEEEEEE
NAAHGYIAIPDGSIPGAAFGTTARIRAGFCLDSRGGVWAGLDKTNAIWHYPLTGFDANGK
ECCCCEEEECCCCCCCCCCCCCEEEEEEEEECCCCCEEECCCCCCCEEECCCCCCCCCCC
PAWGPATVTPIPNSIKPLTRIVYLPESDTMILARGRPVGTDWTAIGTRIEVYHGWLAGNT
CCCCCEEECCCCCCCCCEEEEEEECCCCCEEEECCCCCCCCHHHHCCEEEEEEEEEECCC
AAPDPVIGLSSANPKSITAAGNYLFVGYVHTQPNIDAFNLSTGALAATLINSSPEQIYVG
CCCCCEEEECCCCCCEEEECCCEEEEEEEECCCCCCEEECCCCCEEEEEECCCCCEEEEC
NDVDSMYGLRSYLRSNGEYVITKDNYNAAGIVVYRWTP
CCHHHHHHHHHHHHCCCCEEEECCCCCEEEEEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA