| Definition | Burkholderia pseudomallei K96243 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_006350 |
| Length | 4,074,542 |
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The map label for this gene is 53720962
Identifier: 53720962
GI number: 53720962
Start: 3974691
End: 3974993
Strand: Reverse
Name: 53720962
Synonym: BPSL3352
Alternate gene names: NA
Gene position: 3974993-3974691 (Counterclockwise)
Preceding gene: 53720964
Following gene: 53720961
Centisome position: 97.56
GC content: 59.08
Gene sequence:
>303_bases ATGAGCAAGCAAAAGTTGACGATTCTGCAAGTGGTCCCGCGCGGCGGCATTTCGAAGCGCACCAACCAGCCGTGGGAAAT CCATACGGCGCAATGCGTGCTCGAACAGGAAACCAGCGAAGGAAAGCAAATCCTCGTCGGAACGATCAACCTGCCGAACG CGTTGAAAGATTCTGCGCCCGGTGACTACCTCGCAGAGTTCGCGCTTCAGCAGTCGATGGAAGGCAAGCTCGAACCGCGC ATCGTCTCGCTCGTTCCGTTCGGCCGACCGACAGCGAAGCCGGCGGCGAACGCCAACGCATAA
Upstream 100 bases:
>100_bases TAGCGTCCACCTTTTTCGATTAGCGCGTTCGTCGCGCATGCATGCGGAGACAAATGGCTCCGTTCAACGTGAATAGCAGT CCTAAATCAAAGGAACCGAG
Downstream 100 bases:
>100_bases CCCGTCATGGGCTATCGGTCGTTCGAAGCTGGCCCACTAGAGCGGCCGTCTACATCCGGGCTAGAACTTGAGAGAGAAAG AAAATGAAGAAACTGTTTGT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 100; Mature: 99
Protein sequence:
>100_residues MSKQKLTILQVVPRGGISKRTNQPWEIHTAQCVLEQETSEGKQILVGTINLPNALKDSAPGDYLAEFALQQSMEGKLEPR IVSLVPFGRPTAKPAANANA
Sequences:
>Translated_100_residues MSKQKLTILQVVPRGGISKRTNQPWEIHTAQCVLEQETSEGKQILVGTINLPNALKDSAPGDYLAEFALQQSMEGKLEPR IVSLVPFGRPTAKPAANANA >Mature_99_residues SKQKLTILQVVPRGGISKRTNQPWEIHTAQCVLEQETSEGKQILVGTINLPNALKDSAPGDYLAEFALQQSMEGKLEPRI VSLVPFGRPTAKPAANANA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 10838; Mature: 10706
Theoretical pI: Translated: 9.27; Mature: 9.27
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 3.0 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 1.0 %Met (Mature Protein) 2.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSKQKLTILQVVPRGGISKRTNQPWEIHTAQCVLEQETSEGKQILVGTINLPNALKDSAP CCCCCEEEEEEECCCCCCCCCCCCEEEEHHHHEEECCCCCCCEEEEEECCCCCCCCCCCC GDYLAEFALQQSMEGKLEPRIVSLVPFGRPTAKPAANANA HHHHHHHHHHHHCCCCCCCEEEEEECCCCCCCCCCCCCCC >Mature Secondary Structure SKQKLTILQVVPRGGISKRTNQPWEIHTAQCVLEQETSEGKQILVGTINLPNALKDSAP CCCCEEEEEEECCCCCCCCCCCCEEEEHHHHEEECCCCCCCEEEEEECCCCCCCCCCCC GDYLAEFALQQSMEGKLEPRIVSLVPFGRPTAKPAANANA HHHHHHHHHHHHCCCCCCCEEEEEECCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA