| Definition | Burkholderia pseudomallei K96243 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_006350 |
| Length | 4,074,542 |
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The map label for this gene is 53720959
Identifier: 53720959
GI number: 53720959
Start: 3972214
End: 3973947
Strand: Reverse
Name: 53720959
Synonym: BPSL3349
Alternate gene names: NA
Gene position: 3973947-3972214 (Counterclockwise)
Preceding gene: 53720960
Following gene: 53720958
Centisome position: 97.53
GC content: 58.07
Gene sequence:
>1734_bases TTGTCATGTCGTGAGGTGAATGTGCGTAGAAGAATCATAGGTGTGTGGATCGCGCTGTTTGCCGTGTTCGCGATGATGTG CAATCAGCAAGCGCATGCACAGGCCCTGCTCGCGCCCGTGGAGAACTTTGTTATTAATCGCGCCGAGGCGGCGATTCTCA CGCGCATCGCGATTCAGCGCGGCTTTGCGGCGAACGATCCACGCATTGCGGCGACGCTGGCGGGTATGGGTAAGGCGTCA ACCGCGCTTAATGTCGTCAGCACAGGGGCAGGCGTTGCACTCGCATTCGCGGGCGCTCCGGTTTGGGCGACCCTGTTGGC GGGCGCGGGCATTATTGCCCTAGGTACTGCTTTGCAGATTGGTTTAGCAAAATTGCAGTGGAACGACACGTCGGTTTCTA TCGATGTCGATGCGGTGCCGGCTAGTGCCGGCGATCACTATGAGGCTGTATCGCCTCCGGCGGCCGGCGTCGATCCCGCA TATCGGAAATTGTTGGCGCCTGAACTATGGGCGGCGCAGGCGGGTATTCCGACCTATCGAAATGGCTACTGTCAGCCGAA CGATTCCGTTTGTAACGCTTACCCAACTACGCCGGGGACGGGCTCGAATGTCGCCAATTTTTGGCTCACCCGCGGGAACT TCGACATTCTTCCTGGCACGCTGGATCAGGCCGCGCAGTTCATGTGGTATCTGCATTATTACAACGGGCACTGTGGATTG ACGTCCGGATGCGCCAGCGATGATAGGAACGTTTCATCGGTGCGCCTGTTCTTCGCTCCGACGATCAATATCCCCGGCAA CCCGATCGAGATGTATTACACGGAAACCGGATCGCAAGCCTATGTTGGTTTGGACGGAAAGACCCGCTATAAGAGCTACG TCACGACAGCCAAAGCACGAGCGTTTCAGTATCGGAGCGATATCGTGCCGTCGCTTGTAGCCGAAGACGTGTCGAAGCTT TGGCCGAAACTTCCGCCCAATGTTGCGTCGATTCCATTGCCGTCATCGACGCTTACCAAGCTCGTGGATGAGACGTGGAA ACGTGCAGCAACCGACCCGGATTACAAGGGGTTACCTTACGAGCCGGTTTACGATGGGCTAGTGAAGCCGTGGGTAGATG AGAACCCGAAGCAGGTGCCTACGTTGGGCGATTTGTTTACGGCACCTGCGCATCCGGGCAAACAGGTTGTCATCGATCCG AATGTTCAGCCGGATCCGAACGCAAATCCGAACCCCAATCCGGGCACGAATCCGGGGACCAATCCGGGAACCAATCCGGG CACGAACCCGGGCACGAACCCGGGGACTAATCCGGGAACCAACCCGAGTACGAACCCGGGAACCGACCCGAGCACGAATC CGGGAACCAATCCGGGTACGAATCCCGGGACCAATCCCGGAACGAATCCCGATCCGAAGCCAGACCCGAAGCCAGACCCG AAGCCAGACCCGAAGTTTTGCGCGCTGTATCCGGACGCGTCCGCTTGCGCACCGCTTGGTAGTGCGAACGATGTCGACGT GAGACGTGAATCGAAGAGCGTCTCGTTGGCACCAATTTCGATCGGCTTGACCAATGGCGTCTGTCCGCACCCGTATGAGG TTGAGGTATTCGGTGCGCCACTCAGGTTCGACTATGCCCCAATTTGTGAGCTGGCGGCGAAGCTCCGGCCGCTCGTGCTC TTGCTTGGAGCACTGTTGGCGGGGCTTATTTTCGTTACGGGGCTGACAGTATGA
Upstream 100 bases:
>100_bases GTTGCGGCGGTTCGTGGATTCCGCGTCGGAGAGCTGACCATGCTTTGGTTCTGCATTGAGTTCGCGGTGGTCGTCGTGAC GATCTATACCGCCGCGTTGA
Downstream 100 bases:
>100_bases GTTGGGCGAGCCTGCTTGTATCGCTGGTTGGTCCGATCGTCACGCGCGTATTGGTCGCGCTCGGTATCGGCTTTGTGACC GTTGCGGGGATCGATGCGGC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 577; Mature: 576
Protein sequence:
>577_residues MSCREVNVRRRIIGVWIALFAVFAMMCNQQAHAQALLAPVENFVINRAEAAILTRIAIQRGFAANDPRIAATLAGMGKAS TALNVVSTGAGVALAFAGAPVWATLLAGAGIIALGTALQIGLAKLQWNDTSVSIDVDAVPASAGDHYEAVSPPAAGVDPA YRKLLAPELWAAQAGIPTYRNGYCQPNDSVCNAYPTTPGTGSNVANFWLTRGNFDILPGTLDQAAQFMWYLHYYNGHCGL TSGCASDDRNVSSVRLFFAPTINIPGNPIEMYYTETGSQAYVGLDGKTRYKSYVTTAKARAFQYRSDIVPSLVAEDVSKL WPKLPPNVASIPLPSSTLTKLVDETWKRAATDPDYKGLPYEPVYDGLVKPWVDENPKQVPTLGDLFTAPAHPGKQVVIDP NVQPDPNANPNPNPGTNPGTNPGTNPGTNPGTNPGTNPGTNPSTNPGTDPSTNPGTNPGTNPGTNPGTNPDPKPDPKPDP KPDPKFCALYPDASACAPLGSANDVDVRRESKSVSLAPISIGLTNGVCPHPYEVEVFGAPLRFDYAPICELAAKLRPLVL LLGALLAGLIFVTGLTV
Sequences:
>Translated_577_residues MSCREVNVRRRIIGVWIALFAVFAMMCNQQAHAQALLAPVENFVINRAEAAILTRIAIQRGFAANDPRIAATLAGMGKAS TALNVVSTGAGVALAFAGAPVWATLLAGAGIIALGTALQIGLAKLQWNDTSVSIDVDAVPASAGDHYEAVSPPAAGVDPA YRKLLAPELWAAQAGIPTYRNGYCQPNDSVCNAYPTTPGTGSNVANFWLTRGNFDILPGTLDQAAQFMWYLHYYNGHCGL TSGCASDDRNVSSVRLFFAPTINIPGNPIEMYYTETGSQAYVGLDGKTRYKSYVTTAKARAFQYRSDIVPSLVAEDVSKL WPKLPPNVASIPLPSSTLTKLVDETWKRAATDPDYKGLPYEPVYDGLVKPWVDENPKQVPTLGDLFTAPAHPGKQVVIDP NVQPDPNANPNPNPGTNPGTNPGTNPGTNPGTNPGTNPGTNPSTNPGTDPSTNPGTNPGTNPGTNPGTNPDPKPDPKPDP KPDPKFCALYPDASACAPLGSANDVDVRRESKSVSLAPISIGLTNGVCPHPYEVEVFGAPLRFDYAPICELAAKLRPLVL LLGALLAGLIFVTGLTV >Mature_576_residues SCREVNVRRRIIGVWIALFAVFAMMCNQQAHAQALLAPVENFVINRAEAAILTRIAIQRGFAANDPRIAATLAGMGKAST ALNVVSTGAGVALAFAGAPVWATLLAGAGIIALGTALQIGLAKLQWNDTSVSIDVDAVPASAGDHYEAVSPPAAGVDPAY RKLLAPELWAAQAGIPTYRNGYCQPNDSVCNAYPTTPGTGSNVANFWLTRGNFDILPGTLDQAAQFMWYLHYYNGHCGLT SGCASDDRNVSSVRLFFAPTINIPGNPIEMYYTETGSQAYVGLDGKTRYKSYVTTAKARAFQYRSDIVPSLVAEDVSKLW PKLPPNVASIPLPSSTLTKLVDETWKRAATDPDYKGLPYEPVYDGLVKPWVDENPKQVPTLGDLFTAPAHPGKQVVIDPN VQPDPNANPNPNPGTNPGTNPGTNPGTNPGTNPGTNPGTNPSTNPGTDPSTNPGTNPGTNPGTNPGTNPDPKPDPKPDPK PDPKFCALYPDASACAPLGSANDVDVRRESKSVSLAPISIGLTNGVCPHPYEVEVFGAPLRFDYAPICELAAKLRPLVLL LGALLAGLIFVTGLTV
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 60870; Mature: 60739
Theoretical pI: Translated: 5.99; Mature: 5.99
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.7 %Cys (Translated Protein) 1.0 %Met (Translated Protein) 2.8 %Cys+Met (Translated Protein) 1.7 %Cys (Mature Protein) 0.9 %Met (Mature Protein) 2.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSCREVNVRRRIIGVWIALFAVFAMMCNQQAHAQALLAPVENFVINRAEAAILTRIAIQR CCCCHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC GFAANDPRIAATLAGMGKASTALNVVSTGAGVALAFAGAPVWATLLAGAGIIALGTALQI CCCCCCCEEEEHHHCCCCHHHHHHHHHCCCCEEEEECCCHHHHHHHHCCCHHHHHHHHHH GLAKLQWNDTSVSIDVDAVPASAGDHYEAVSPPAAGVDPAYRKLLAPELWAAQAGIPTYR HHEEEEECCCEEEEEEECCCCCCCCCCCCCCCCCCCCCHHHHHHHCHHHHHHHCCCCCCC NGYCQPNDSVCNAYPTTPGTGSNVANFWLTRGNFDILPGTLDQAAQFMWYLHYYNGHCGL CCCCCCCCCCCCCCCCCCCCCCCCEEEEEECCCCEECCCCHHHHHHHHHHEEEECCCCCC TSGCASDDRNVSSVRLFFAPTINIPGNPIEMYYTETGSQAYVGLDGKTRYKSYVTTAKAR CCCCCCCCCCCEEEEEEEEEEECCCCCCEEEEEECCCCEEEEECCCCHHHHHHHHHHHHH AFQYRSDIVPSLVAEDVSKLWPKLPPNVASIPLPSSTLTKLVDETWKRAATDPDYKGLPY HHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCC EPVYDGLVKPWVDENPKQVPTLGDLFTAPAHPGKQVVIDPNVQPDPNANPNPNPGTNPGT CHHHHHHHCCCCCCCCCCCCCHHHHHCCCCCCCCEEEECCCCCCCCCCCCCCCCCCCCCC NPGTNPGTNPGTNPGTNPGTNPSTNPGTDPSTNPGTNPGTNPGTNPGTNPDPKPDPKPDP CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC KPDPKFCALYPDASACAPLGSANDVDVRRESKSVSLAPISIGLTNGVCPHPYEVEVFGAP CCCCCEEEECCCHHHCCCCCCCCCCCEECCCCCEEEEEEEEECCCCCCCCCEEEEEECCC LRFDYAPICELAAKLRPLVLLLGALLAGLIFVTGLTV CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure SCREVNVRRRIIGVWIALFAVFAMMCNQQAHAQALLAPVENFVINRAEAAILTRIAIQR CCCHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC GFAANDPRIAATLAGMGKASTALNVVSTGAGVALAFAGAPVWATLLAGAGIIALGTALQI CCCCCCCEEEEHHHCCCCHHHHHHHHHCCCCEEEEECCCHHHHHHHHCCCHHHHHHHHHH GLAKLQWNDTSVSIDVDAVPASAGDHYEAVSPPAAGVDPAYRKLLAPELWAAQAGIPTYR HHEEEEECCCEEEEEEECCCCCCCCCCCCCCCCCCCCCHHHHHHHCHHHHHHHCCCCCCC NGYCQPNDSVCNAYPTTPGTGSNVANFWLTRGNFDILPGTLDQAAQFMWYLHYYNGHCGL CCCCCCCCCCCCCCCCCCCCCCCCEEEEEECCCCEECCCCHHHHHHHHHHEEEECCCCCC TSGCASDDRNVSSVRLFFAPTINIPGNPIEMYYTETGSQAYVGLDGKTRYKSYVTTAKAR CCCCCCCCCCCEEEEEEEEEEECCCCCCEEEEEECCCCEEEEECCCCHHHHHHHHHHHHH AFQYRSDIVPSLVAEDVSKLWPKLPPNVASIPLPSSTLTKLVDETWKRAATDPDYKGLPY HHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCC EPVYDGLVKPWVDENPKQVPTLGDLFTAPAHPGKQVVIDPNVQPDPNANPNPNPGTNPGT CHHHHHHHCCCCCCCCCCCCCHHHHHCCCCCCCCEEEECCCCCCCCCCCCCCCCCCCCCC NPGTNPGTNPGTNPGTNPGTNPSTNPGTDPSTNPGTNPGTNPGTNPGTNPDPKPDPKPDP CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC KPDPKFCALYPDASACAPLGSANDVDVRRESKSVSLAPISIGLTNGVCPHPYEVEVFGAP CCCCCEEEECCCHHHCCCCCCCCCCCEECCCCCEEEEEEEEECCCCCCCCCEEEEEECCC LRFDYAPICELAAKLRPLVLLLGALLAGLIFVTGLTV CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA