Click here to switch to the map view.

The map label for this gene is 53720945

Identifier: 53720945

GI number: 53720945

Start: 3955243

End: 3955671

Strand: Reverse

Name: 53720945

Synonym: BPSL3335

Alternate gene names: NA

Gene position: 3955671-3955243 (Counterclockwise)

Preceding gene: 53720946

Following gene: 53720944

Centisome position: 97.08

GC content: 64.57

Gene sequence:

>429_bases
ATGAAGAAGACCTTCAAGACGGGAGCCTGGCTGCCGGTCGCGGCAGCCGGCGTGCTGCTCGCGGGCTGCGCGGCGAATCA
GCCGAAGCCGCTCTATCAATGGGACGGCTATCAGCCGCAAGTCTACGAATACTTCAAGGGGCAAAAGAGCCCCGAGGACC
AGATCGACGCGCTCGAGAAGGCGCTGCAGCAGATCCGCGCAAAGGGCAACCGCCCGCCGCCCGGCTTCGAGGCGCATCTC
GGCATGCTGTACGCGAGCGTCGGCAAGGAGCAGCAGGCCGAGCAGTCGTTCCAGGCCGAGAAGGCGTCGTTTCCCGAATC
GTCGCCGTTCATGGATTTCCTGCTGAAGAAGAAAGCCGCCGCGCCGCAAGCGAAGCCGTCAGCGCCCGCGCAGCCGCAAA
CCCAAACCCAAACGCAGGCGCAACAATGA

Upstream 100 bases:

>100_bases
TCGAACAGGTCGACGCGGGCGCGCTCGCGTCCGGCAAGTAGGCGCGCCGCGCGGCGCGGACGAATCCGCTCATCCATCGT
TTCCATCGACAACGACAATA

Downstream 100 bases:

>100_bases
GGGCCGCCATGTTCAAGTTCATTACCGCGCGGCGCCTGGCGGCCGCGTCCGTGCTGGCGCTGCTCGCCGCATGCGCCGCG
CCCGCGAAGCATGTCGACTA

Product: putative lipoprotein

Products: NA

Alternate protein names: TPR Repeat Domain Protein; Periplasmic Protein

Number of amino acids: Translated: 142; Mature: 142

Protein sequence:

>142_residues
MKKTFKTGAWLPVAAAGVLLAGCAANQPKPLYQWDGYQPQVYEYFKGQKSPEDQIDALEKALQQIRAKGNRPPPGFEAHL
GMLYASVGKEQQAEQSFQAEKASFPESSPFMDFLLKKKAAAPQAKPSAPAQPQTQTQTQAQQ

Sequences:

>Translated_142_residues
MKKTFKTGAWLPVAAAGVLLAGCAANQPKPLYQWDGYQPQVYEYFKGQKSPEDQIDALEKALQQIRAKGNRPPPGFEAHL
GMLYASVGKEQQAEQSFQAEKASFPESSPFMDFLLKKKAAAPQAKPSAPAQPQTQTQTQAQQ
>Mature_142_residues
MKKTFKTGAWLPVAAAGVLLAGCAANQPKPLYQWDGYQPQVYEYFKGQKSPEDQIDALEKALQQIRAKGNRPPPGFEAHL
GMLYASVGKEQQAEQSFQAEKASFPESSPFMDFLLKKKAAAPQAKPSAPAQPQTQTQTQAQQ

Specific function: Unknown

COG id: COG4259

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 15568; Mature: 15568

Theoretical pI: Translated: 9.63; Mature: 9.63

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKKTFKTGAWLPVAAAGVLLAGCAANQPKPLYQWDGYQPQVYEYFKGQKSPEDQIDALEK
CCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHCCCCCCHHHHHHHHH
ALQQIRAKGNRPPPGFEAHLGMLYASVGKEQQAEQSFQAEKASFPESSPFMDFLLKKKAA
HHHHHHHCCCCCCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHC
APQAKPSAPAQPQTQTQTQAQQ
CCCCCCCCCCCCCCCCHHHCCC
>Mature Secondary Structure
MKKTFKTGAWLPVAAAGVLLAGCAANQPKPLYQWDGYQPQVYEYFKGQKSPEDQIDALEK
CCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHCCCCCCHHHHHHHHH
ALQQIRAKGNRPPPGFEAHLGMLYASVGKEQQAEQSFQAEKASFPESSPFMDFLLKKKAA
HHHHHHHCCCCCCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHC
APQAKPSAPAQPQTQTQTQAQQ
CCCCCCCCCCCCCCCCHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA