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The map label for this gene is cyt [H]

Identifier: 53720881

GI number: 53720881

Start: 3888315

End: 3888662

Strand: Reverse

Name: cyt [H]

Synonym: BPSL3271

Alternate gene names: 53720881

Gene position: 3888662-3888315 (Counterclockwise)

Preceding gene: 53720882

Following gene: 53720880

Centisome position: 95.44

GC content: 70.11

Gene sequence:

>348_bases
GTGAAACGGACGATGAGCGCAGCGGCCGCCGCGATGGCGGTGGTGAGCTGCGCGATGGCGGCCGCGCCGGCGGCGCATGC
GGATGCCGGCGATGGGCTGAAGGTCGCGCGCAGCAACGCGTGCATGGGTTGCCACGCGGTGGACCGGAAGCTCGTCGGCC
CATCGTTCCAGCAGATCGCCGAGCGGTACAAGAACGACAAGCAGGCGGAGCCGAAGCTCGCGAAGAAGGTGAAGGATGGC
GGCTCCGGCGTGTGGGGCGCGATCCCGATGCCCGCGCACCCGCGGATGAGCGATGCCGACGTGCGCTCGGTCGTTCAGTG
GGTGTTGGCCGGCGCGCCGTCGAAATAG

Upstream 100 bases:

>100_bases
TCACCGCGACGCCGCTATCGGCGCCGGCGCCGGTTTCCAATTCGTCGAACGTGCATCCGGGCAATCCGAAGGCGGGGACG
CCGTGACGATTGCGAAGCGC

Downstream 100 bases:

>100_bases
CCGATCGGCGCAAATCTATTGCCAAGCGCGGATGATGTGATGTATGATCGTCGGCTGTTGGTGAGGGGCGGTAGCTCAGC
TGGGAGAGCGTCGCGTTCGC

Product: putative cytochrome c-551

Products: NA

Alternate protein names: Cytochrome c-551; Cytochrome c552 [H]

Number of amino acids: Translated: 115; Mature: 115

Protein sequence:

>115_residues
MKRTMSAAAAAMAVVSCAMAAAPAAHADAGDGLKVARSNACMGCHAVDRKLVGPSFQQIAERYKNDKQAEPKLAKKVKDG
GSGVWGAIPMPAHPRMSDADVRSVVQWVLAGAPSK

Sequences:

>Translated_115_residues
MKRTMSAAAAAMAVVSCAMAAAPAAHADAGDGLKVARSNACMGCHAVDRKLVGPSFQQIAERYKNDKQAEPKLAKKVKDG
GSGVWGAIPMPAHPRMSDADVRSVVQWVLAGAPSK
>Mature_115_residues
MKRTMSAAAAAMAVVSCAMAAAPAAHADAGDGLKVARSNACMGCHAVDRKLVGPSFQQIAERYKNDKQAEPKLAKKVKDG
GSGVWGAIPMPAHPRMSDADVRSVVQWVLAGAPSK

Specific function: Monoheme c-type cytochrome. Probable electron donor to membrane cytochrome oxidase and to periplasmic nitrite reductase [H]

COG id: COG4654

COG function: function code C; Cytochrome c551/c552

Gene ontology:

Cell location: Periplasm [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR009056
- InterPro:   IPR003088
- InterPro:   IPR002324 [H]

Pfam domain/function: PF00034 Cytochrom_C [H]

EC number: NA

Molecular weight: Translated: 11901; Mature: 11901

Theoretical pI: Translated: 10.30; Mature: 10.30

Prosite motif: PS00013 PROKAR_LIPOPROTEIN ; PS51007 CYTC

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.6 %Cys     (Translated Protein)
6.1 %Met     (Translated Protein)
8.7 %Cys+Met (Translated Protein)
2.6 %Cys     (Mature Protein)
6.1 %Met     (Mature Protein)
8.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKRTMSAAAAAMAVVSCAMAAAPAAHADAGDGLKVARSNACMGCHAVDRKLVGPSFQQIA
CCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHCCCCCCCHHHHHHHHCCCCHHHHH
ERYKNDKQAEPKLAKKVKDGGSGVWGAIPMPAHPRMSDADVRSVVQWVLAGAPSK
HHHCCCCCCCHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCC
>Mature Secondary Structure
MKRTMSAAAAAMAVVSCAMAAAPAAHADAGDGLKVARSNACMGCHAVDRKLVGPSFQQIA
CCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHCCCCCCCHHHHHHHHCCCCHHHHH
ERYKNDKQAEPKLAKKVKDGGSGVWGAIPMPAHPRMSDADVRSVVQWVLAGAPSK
HHHCCCCCCCHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9746537; 12700255 [H]