| Definition | Burkholderia pseudomallei K96243 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_006350 |
| Length | 4,074,542 |
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The map label for this gene is 53720865
Identifier: 53720865
GI number: 53720865
Start: 3870399
End: 3870716
Strand: Reverse
Name: 53720865
Synonym: BPSL3255
Alternate gene names: NA
Gene position: 3870716-3870399 (Counterclockwise)
Preceding gene: 53720869
Following gene: 53720861
Centisome position: 95.0
GC content: 65.09
Gene sequence:
>318_bases ATGCCGATCAATAGCGATTGGGTTGCGTCCACCGGATTGCCTGCGGCCGTCTACTTGTTTTGCCTCGGCTATGCGCTCTT ACGCGCGTTCGGGCCGCGTCATGCGCGCTATCCGAAGTTGATGCGCCGCTATGCGATGGCGTGCGCCGGCGCGGTGCTGT GCGGCATGCTCGCGACGATCGGCGCGGCGCTTCGAATGCCCGCCGCACCGGTGCTCGCCTCGTTCGGCTCGACGGTGACG TTCGCCGGCATCGTAGGCGTGCTGATCGGTTGCATGTGCGAAGCAGCCGTATCGTTCGGCAAGCGTTGGGAGCGTTGA
Upstream 100 bases:
>100_bases TAATTTCAGCAAAAGAAACTATGCGCGCGTGACCGTGCATCGTCGTGCACGATTGCCGGCCGCATGTTCGATCCAATGAC GACATTCACGGAGTCCGATC
Downstream 100 bases:
>100_bases GCACGCCGTACGTTCGAGGCGCGCCCGCTCGATGAGCGGCGGCGGTGCTCGTGCGCGGGCGTCCGCGAAAAGCCGGAGCG ACATCAATTCGCAACTAACG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 105; Mature: 104
Protein sequence:
>105_residues MPINSDWVASTGLPAAVYLFCLGYALLRAFGPRHARYPKLMRRYAMACAGAVLCGMLATIGAALRMPAAPVLASFGSTVT FAGIVGVLIGCMCEAAVSFGKRWER
Sequences:
>Translated_105_residues MPINSDWVASTGLPAAVYLFCLGYALLRAFGPRHARYPKLMRRYAMACAGAVLCGMLATIGAALRMPAAPVLASFGSTVT FAGIVGVLIGCMCEAAVSFGKRWER >Mature_104_residues PINSDWVASTGLPAAVYLFCLGYALLRAFGPRHARYPKLMRRYAMACAGAVLCGMLATIGAALRMPAAPVLASFGSTVTF AGIVGVLIGCMCEAAVSFGKRWER
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 11103; Mature: 10972
Theoretical pI: Translated: 9.72; Mature: 9.72
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
4.8 %Cys (Translated Protein) 5.7 %Met (Translated Protein) 10.5 %Cys+Met (Translated Protein) 4.8 %Cys (Mature Protein) 4.8 %Met (Mature Protein) 9.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPINSDWVASTGLPAAVYLFCLGYALLRAFGPRHARYPKLMRRYAMACAGAVLCGMLATI CCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH GAALRMPAAPVLASFGSTVTFAGIVGVLIGCMCEAAVSFGKRWER HHHHHCCHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure PINSDWVASTGLPAAVYLFCLGYALLRAFGPRHARYPKLMRRYAMACAGAVLCGMLATI CCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH GAALRMPAAPVLASFGSTVTFAGIVGVLIGCMCEAAVSFGKRWER HHHHHCCHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA