Click here to switch to the map view.

The map label for this gene is cyaY

Identifier: 53720782

GI number: 53720782

Start: 3781664

End: 3781990

Strand: Reverse

Name: cyaY

Synonym: BPSL3175

Alternate gene names: 53720782

Gene position: 3781990-3781664 (Counterclockwise)

Preceding gene: 53720785

Following gene: 53720780

Centisome position: 92.82

GC content: 66.36

Gene sequence:

>327_bases
ATGTCCGACACCGATTACCTGACCCGGGCCGAAGCCGTGCTGGCAGCCGTCGAGCGTTCGGTCGACGCCGCCAACGACGG
CGACGCCGACATCGATCTCGAGCGCAACGGCAGCGTGCTCACGCTCACGTTCGAGAACGGCTCGAAGATCATCGTGAACC
TGCAGCCGCCGATGAAGGAAGTGTGGATCGCCGCGAAGGCGGGCGGCTTCCATTACCGGTTCGTCGACGGCGCATGGCGC
GATACGCGCAGCGGCGACGAGTTCTTCGCGGCGCTGACGGGATACGCCACGCAGCAGGCAGGCATGCCGATCGCGTTCAG
CGCGTGA

Upstream 100 bases:

>100_bases
GTTGGCCGCAGCCCGCGAGCGCCAAAGCCGCTACAATCGCGCTCATCTGCAAAACGATACGCATGACCGTCCCTAAACAG
TTGAATCAATAGAGTTTAGC

Downstream 100 bases:

>100_bases
CGCCTGCCTTCGGCGGGCGGCGCTCGCGCGCAGCGCGCCGCGGGCGCCGCCGAGCCGAGCCCCCTAAGACAAAAGCGGCC
TTTCGGCCGCTTTTGTCTTT

Product: frataxin-like protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 108; Mature: 107

Protein sequence:

>108_residues
MSDTDYLTRAEAVLAAVERSVDAANDGDADIDLERNGSVLTLTFENGSKIIVNLQPPMKEVWIAAKAGGFHYRFVDGAWR
DTRSGDEFFAALTGYATQQAGMPIAFSA

Sequences:

>Translated_108_residues
MSDTDYLTRAEAVLAAVERSVDAANDGDADIDLERNGSVLTLTFENGSKIIVNLQPPMKEVWIAAKAGGFHYRFVDGAWR
DTRSGDEFFAALTGYATQQAGMPIAFSA
>Mature_107_residues
SDTDYLTRAEAVLAAVERSVDAANDGDADIDLERNGSVLTLTFENGSKIIVNLQPPMKEVWIAAKAGGFHYRFVDGAWRD
TRSGDEFFAALTGYATQQAGMPIAFSA

Specific function: Not Known; Its Knock Out Does Not Affect Cellular Iron Content. [C]

COG id: COG1965

COG function: function code P; Protein implicated in iron transport, frataxin homolog

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the frataxin family

Homologues:

Organism=Escherichia coli, GI1790239, Length=106, Percent_Identity=44.3396226415094, Blast_Score=84, Evalue=2e-18,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): CYAY_BURM7 (A3MRS9)

Other databases:

- EMBL:   CP000548
- RefSeq:   YP_001082965.1
- ProteinModelPortal:   A3MRS9
- SMR:   A3MRS9
- GeneID:   4892345
- GenomeReviews:   CP000548_GR
- KEGG:   bmn:BMA10247_3449
- TIGR:   BMA10247_3449
- HOGENOM:   HBG687517
- OMA:   EPLHQIW
- ProtClustDB:   PRK00446
- BioCyc:   BMAL320389:BMA10247_3449-MONOMER
- HAMAP:   MF_00142
- InterPro:   IPR002908
- InterPro:   IPR020895
- Gene3D:   G3DSA:3.30.920.10
- TIGRFAMs:   TIGR03421

Pfam domain/function: PF01491 Frataxin_Cyay; SSF55387 Frataxin_like

EC number: NA

Molecular weight: Translated: 11677; Mature: 11546

Theoretical pI: Translated: 4.22; Mature: 4.22

Prosite motif: PS01344 FRATAXIN_1; PS50810 FRATAXIN_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
1.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSDTDYLTRAEAVLAAVERSVDAANDGDADIDLERNGSVLTLTFENGSKIIVNLQPPMKE
CCCCHHHHHHHHHHHHHHHCCCCCCCCCCEEEEECCCCEEEEEECCCCEEEEECCCCHHH
VWIAAKAGGFHYRFVDGAWRDTRSGDEFFAALTGYATQQAGMPIAFSA
EEEEECCCCEEEEEECCCCCCCCCCCHHHHHHHCCCHHCCCCCEEECC
>Mature Secondary Structure 
SDTDYLTRAEAVLAAVERSVDAANDGDADIDLERNGSVLTLTFENGSKIIVNLQPPMKE
CCCHHHHHHHHHHHHHHHCCCCCCCCCCEEEEECCCCEEEEEECCCCEEEEECCCCHHH
VWIAAKAGGFHYRFVDGAWRDTRSGDEFFAALTGYATQQAGMPIAFSA
EEEEECCCCEEEEEECCCCCCCCCCCHHHHHHHCCCHHCCCCCEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA