| Definition | Burkholderia pseudomallei K96243 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_006350 |
| Length | 4,074,542 |
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The map label for this gene is 53720779
Identifier: 53720779
GI number: 53720779
Start: 3777289
End: 3777969
Strand: Reverse
Name: 53720779
Synonym: BPSL3172
Alternate gene names: NA
Gene position: 3777969-3777289 (Counterclockwise)
Preceding gene: 53720780
Following gene: 53720778
Centisome position: 92.72
GC content: 74.74
Gene sequence:
>681_bases ATGATGCGCGTGGTGGCGGGCGGTGCGGTGCCGCGCGACGCGCGAATGCGGCGCGCGTGGCTGGGCGGGTTCAATCTGTT GCCGTACCGTGCGCGCGACGCGCGCCGGGCGCGGCGGCGTGTCCTCGGCGAACTGGCGGCCGCGGCGTGCGCGGGGTTGG CGGGCGTCGCGCTTTGGCGCGTCGGGCGTATGTTCGAGCGCGAGCGCTTCGATGCGCAGCGGGCGCTGATGGAGCGCCGG CTCGCCGCGTGGGCGCCGCAGCTGAAAGCCGCCGAGCAGGCCGCGCGGCTGCGCGATGCCGCGCGCGAGCGCGCGGCGCT GGCCGCCGAACGCGCCGGGCCGCGCGAACGGACGGTCGATTTGTTCGATACGTTGCGGCAATTGCGCTACGACGGTGTGC GGCTGCGGTCGATACGCTGCGACGGTCGCGATGCGTTACTCGAAGCGAGCGCGCTCGATCCCGCATCGGCTGAGCGATGG CTGCGCGCGCTCGATGCCGCGCAGCGCGGCTGGACGATGGAGGTCGCGGGTTGGCAGGCTGCGCGAACTTCGTGGGGGCG AGACGCGGGCAGTGGTCGATCGCTGTCGTTCTCGGTGCGGATTCGTTGGCCCGCGGGCGCTCGGGGGCGCGGCGCGAGCA TGGTGGCGCATGCGGCGGCGGCTGCACGGGAGGGGGCGTGA
Upstream 100 bases:
>100_bases AATGCGCGGCGTGCGGCCCGCTCGGCGCGGTCGACGACGGGCTCGCCCATTCGCCCGGTTTCGCGGTCGCGTTCGGGCTC GCGCTGCGCGGGGTGTTCGA
Downstream 100 bases:
>100_bases GCGGAGCGGTCGAACGTGCAGCAGGGCGGCGCGCATGGGCGAGATGGGCCGATTCGCGCCGCATGTCGGGCGCCGGCTGG CGAATGGCGATGCGCGCGGC
Product: hypothetical protein
Products: NA
Alternate protein names: Fimbrial Assembly Protein PilN
Number of amino acids: Translated: 226; Mature: 226
Protein sequence:
>226_residues MMRVVAGGAVPRDARMRRAWLGGFNLLPYRARDARRARRRVLGELAAAACAGLAGVALWRVGRMFERERFDAQRALMERR LAAWAPQLKAAEQAARLRDAARERAALAAERAGPRERTVDLFDTLRQLRYDGVRLRSIRCDGRDALLEASALDPASAERW LRALDAAQRGWTMEVAGWQAARTSWGRDAGSGRSLSFSVRIRWPAGARGRGASMVAHAAAAAREGA
Sequences:
>Translated_226_residues MMRVVAGGAVPRDARMRRAWLGGFNLLPYRARDARRARRRVLGELAAAACAGLAGVALWRVGRMFERERFDAQRALMERR LAAWAPQLKAAEQAARLRDAARERAALAAERAGPRERTVDLFDTLRQLRYDGVRLRSIRCDGRDALLEASALDPASAERW LRALDAAQRGWTMEVAGWQAARTSWGRDAGSGRSLSFSVRIRWPAGARGRGASMVAHAAAAAREGA >Mature_226_residues MMRVVAGGAVPRDARMRRAWLGGFNLLPYRARDARRARRRVLGELAAAACAGLAGVALWRVGRMFERERFDAQRALMERR LAAWAPQLKAAEQAARLRDAARERAALAAERAGPRERTVDLFDTLRQLRYDGVRLRSIRCDGRDALLEASALDPASAERW LRALDAAQRGWTMEVAGWQAARTSWGRDAGSGRSLSFSVRIRWPAGARGRGASMVAHAAAAAREGA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 24904; Mature: 24904
Theoretical pI: Translated: 12.19; Mature: 12.19
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 3.1 %Met (Translated Protein) 4.0 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 3.1 %Met (Mature Protein) 4.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MMRVVAGGAVPRDARMRRAWLGGFNLLPYRARDARRARRRVLGELAAAACAGLAGVALWR CCEEECCCCCCHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH VGRMFERERFDAQRALMERRLAAWAPQLKAAEQAARLRDAARERAALAAERAGPRERTVD HHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHH LFDTLRQLRYDGVRLRSIRCDGRDALLEASALDPASAERWLRALDAAQRGWTMEVAGWQA HHHHHHHHHHCCEEEEEEECCCHHHHHHHCCCCHHHHHHHHHHHHHHHCCCEEEECCCHH ARTSWGRDAGSGRSLSFSVRIRWPAGARGRGASMVAHAAAAAREGA HHHHCCCCCCCCCEEEEEEEEECCCCCCCCCHHHHHHHHHHHHCCC >Mature Secondary Structure MMRVVAGGAVPRDARMRRAWLGGFNLLPYRARDARRARRRVLGELAAAACAGLAGVALWR CCEEECCCCCCHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH VGRMFERERFDAQRALMERRLAAWAPQLKAAEQAARLRDAARERAALAAERAGPRERTVD HHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHH LFDTLRQLRYDGVRLRSIRCDGRDALLEASALDPASAERWLRALDAAQRGWTMEVAGWQA HHHHHHHHHHCCEEEEEEECCCHHHHHHHCCCCHHHHHHHHHHHHHHHCCCEEEECCCHH ARTSWGRDAGSGRSLSFSVRIRWPAGARGRGASMVAHAAAAAREGA HHHHCCCCCCCCCEEEEEEEEECCCCCCCCCHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA