| Definition | Burkholderia pseudomallei K96243 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_006350 |
| Length | 4,074,542 |
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The map label for this gene is aroK
Identifier: 53720776
GI number: 53720776
Start: 3773983
End: 3774537
Strand: Reverse
Name: aroK
Synonym: BPSL3169
Alternate gene names: 53720776
Gene position: 3774537-3773983 (Counterclockwise)
Preceding gene: 53720777
Following gene: 53720775
Centisome position: 92.64
GC content: 65.41
Gene sequence:
>555_bases TTGCAAGCGCGGGACCCACACGTGAACGTAATTTTCGTCGGGCTCATGGGGGCGGGTAAGACCACCGTGGGCCGGGCGGT CGCGCGCCGGCTCGACAGACCCTTCTTCGATTCGGATCACGAGATCGAGGCGCGCACCGGCGCGCGCATTCCGGTCATCT TCGAACTCGAGGGCGAAGCGGGCTTCCGTGACCGCGAGGCGCAGATGATCGCCGAGCTCACGCAGCGCGAGAACATCGTG CTGGCGACGGGCGGCGGCGCGATCCTGCGCCCCGAGAACCGCAAGCTGCTTCACGAACGGGGCCTCGTCGTCTATCTGCG CGCGAATCCGCACGATCTCTGGCTGCGCACCCGCAAGGACAAGAATCGCCCGCTGTTGCAGACCGACGATCCGAAAGCCA AGCTCGAAGCGCTGTACGAAGCGCGCGATCCGCTCTACCGCGAATGCGCGCACTTCGTCATCGAAACCGGGCGGCCGTCC GTCAACGGGCTCGTCAACATGGTGCTGATGCAGCTCGAAATGGCGGGCATCGTCGCCAAGCCACTCCAAGCATGA
Upstream 100 bases:
>100_bases CCGTCGTGATCGGGCCCTGACGCCCGTGGGAGCCAGGCTCGACAAGGCGGGCGCTTTGCCAGTAAGCTGCGCGACACACT CACTGAAGCAGAGGAAGCCG
Downstream 100 bases:
>100_bases TTACCGTCAACGTCGACCTGGGCGAGCGCGCCTATCCGATCCACATCGGCGCCGATCTGATCGGCCGCACCGAGCTGTTC GCGCCGCACATCGCGGGCGC
Product: shikimate kinase
Products: NA
Alternate protein names: SK
Number of amino acids: Translated: 184; Mature: 184
Protein sequence:
>184_residues MQARDPHVNVIFVGLMGAGKTTVGRAVARRLDRPFFDSDHEIEARTGARIPVIFELEGEAGFRDREAQMIAELTQRENIV LATGGGAILRPENRKLLHERGLVVYLRANPHDLWLRTRKDKNRPLLQTDDPKAKLEALYEARDPLYRECAHFVIETGRPS VNGLVNMVLMQLEMAGIVAKPLQA
Sequences:
>Translated_184_residues MQARDPHVNVIFVGLMGAGKTTVGRAVARRLDRPFFDSDHEIEARTGARIPVIFELEGEAGFRDREAQMIAELTQRENIV LATGGGAILRPENRKLLHERGLVVYLRANPHDLWLRTRKDKNRPLLQTDDPKAKLEALYEARDPLYRECAHFVIETGRPS VNGLVNMVLMQLEMAGIVAKPLQA >Mature_184_residues MQARDPHVNVIFVGLMGAGKTTVGRAVARRLDRPFFDSDHEIEARTGARIPVIFELEGEAGFRDREAQMIAELTQRENIV LATGGGAILRPENRKLLHERGLVVYLRANPHDLWLRTRKDKNRPLLQTDDPKAKLEALYEARDPLYRECAHFVIETGRPS VNGLVNMVLMQLEMAGIVAKPLQA
Specific function: Catalyzes the specific phosphorylation of the 3-hydroxyl group of shikimic acid using ATP as a cosubstrate
COG id: COG0703
COG function: function code E; Shikimate kinase
Gene ontology:
Cell location: Cytoplasm (Probable)
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the shikimate kinase family
Homologues:
Organism=Escherichia coli, GI87082255, Length=166, Percent_Identity=48.7951807228916, Blast_Score=158, Evalue=3e-40, Organism=Escherichia coli, GI1786587, Length=155, Percent_Identity=38.0645161290323, Blast_Score=92, Evalue=3e-20,
Paralogues:
None
Copy number: 140 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). 200 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). [C]
Swissprot (AC and ID): AROK_BURMA (Q62GA9)
Other databases:
- EMBL: CP000010 - RefSeq: YP_104265.1 - ProteinModelPortal: Q62GA9 - SMR: Q62GA9 - GeneID: 3091211 - GenomeReviews: CP000010_GR - KEGG: bma:BMA2747 - TIGR: BMA2747 - HOGENOM: HBG335815 - OMA: VIYLRAN - PhylomeDB: Q62GA9 - ProtClustDB: PRK00131 - BioCyc: BMAL243160:BMA_2747-MONOMER - BRENDA: 2.7.1.71 - GO: GO:0005737 - HAMAP: MF_00109 - InterPro: IPR000623 - InterPro: IPR023000 - PRINTS: PR01100
Pfam domain/function: PF01202 SKI
EC number: =2.7.1.71
Molecular weight: Translated: 20715; Mature: 20715
Theoretical pI: Translated: 9.12; Mature: 9.12
Prosite motif: PS01128 SHIKIMATE_KINASE; PS00267 TACHYKININ
Important sites: BINDING 39-39 BINDING 63-63 BINDING 85-85 BINDING 123-123 BINDING 142-142
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 3.3 %Met (Translated Protein) 3.8 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 3.3 %Met (Mature Protein) 3.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MQARDPHVNVIFVGLMGAGKTTVGRAVARRLDRPFFDSDHEIEARTGARIPVIFELEGEA CCCCCCCEEEEEEEEECCCCHHHHHHHHHHHCCCCCCCCCCEECCCCCCCEEEEEECCCC GFRDREAQMIAELTQRENIVLATGGGAILRPENRKLLHERGLVVYLRANPHDLWLRTRKD CCCHHHHHHHHHHHHCCCEEEEECCCEEECCCCHHHHHHCCEEEEEECCCCEEEEEECCC KNRPLLQTDDPKAKLEALYEARDPLYRECAHFVIETGRPSVNGLVNMVLMQLEMAGIVAK CCCCCCCCCCHHHHHHHHHHHCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHC PLQA CCCC >Mature Secondary Structure MQARDPHVNVIFVGLMGAGKTTVGRAVARRLDRPFFDSDHEIEARTGARIPVIFELEGEA CCCCCCCEEEEEEEEECCCCHHHHHHHHHHHCCCCCCCCCCEECCCCCCCEEEEEECCCC GFRDREAQMIAELTQRENIVLATGGGAILRPENRKLLHERGLVVYLRANPHDLWLRTRKD CCCHHHHHHHHHHHHCCCEEEEECCCEEECCCCHHHHHHCCEEEEEECCCCEEEEEECCC KNRPLLQTDDPKAKLEALYEARDPLYRECAHFVIETGRPSVNGLVNMVLMQLEMAGIVAK CCCCCCCCCCHHHHHHHHHHHCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHC PLQA CCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA