| Definition | Burkholderia pseudomallei K96243 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_006350 |
| Length | 4,074,542 |
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The map label for this gene is mlaC [H]
Identifier: 53720753
GI number: 53720753
Start: 3745813
End: 3746445
Strand: Reverse
Name: mlaC [H]
Synonym: BPSL3146
Alternate gene names: 53720753
Gene position: 3746445-3745813 (Counterclockwise)
Preceding gene: 53720754
Following gene: 53720752
Centisome position: 91.95
GC content: 63.82
Gene sequence:
>633_bases ATGAAGAAACTGTTCCTGATCCCCGTCCTTGCCGCGCTGTTCTCGTTCGGCGCGGCCGCCGCTCACGCGGAAGTCGATCA ATCGAATCCGCAGGCGCTCATCAAGTCCGCGACGCAGCAGGTGCTCGACGAAGTGCGCACGCAGACGATCAAGCAGGGCG ATACCGCCCGCATCATGACGATCGTCAACAAGGACATCCTGCCGTACACCGATTTCCGCCGCACGACGCAGCTCGCGATG GGCCGCAACTGGCGCACCGCGACGCCTGCCCAGCAGCAGCAGGTGATCGAGCAGTTCAAGCAACTGCTGATCCGCACCTA CTCGGGCGCGCTCGCGCAACTGAAGCCGGACCAGCAGATCCAGTATCCGCCGTTTCGCGCGGACGCCGACGCCACCGACG TCGTCGTGCGCACGGTCGCGATGAACAACGGCCAGCCGGTGCAGATCGACTACCGCCTGTACAAGACGGCGCAGGGCTGG CGCGTCTACGACCTGAACGTGCTGGGTGCCTGGCTGATCCAGACCTACCAGCAGCAGTTCAGCGAGAAGATCCAGCAAAG CGGCGTGGATGGGCTGATCCAGTTCCTGACCGAACGCAACCAGCAGCTTGCCTCGGGCAAGCAGGCATCGTGA
Upstream 100 bases:
>100_bases CGGTTACAGCCGGAAACGATTCTGACGGCGGCCGGCGCGAACTTGCGCCGGCGTCGACGGTTCCAAGTCTGGCATCGACT CATACAAGCAGGTCATACCT
Downstream 100 bases:
>100_bases GCCGCTTCGACTCGGGCGCCACGCTGACCCACGCGAGCGCGAAAGCCGCGCTCGCCCAAGGGCTCGCGCGCATCGAGGCG GGCGCCACCGCCGTCGACTG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 210; Mature: 210
Protein sequence:
>210_residues MKKLFLIPVLAALFSFGAAAAHAEVDQSNPQALIKSATQQVLDEVRTQTIKQGDTARIMTIVNKDILPYTDFRRTTQLAM GRNWRTATPAQQQQVIEQFKQLLIRTYSGALAQLKPDQQIQYPPFRADADATDVVVRTVAMNNGQPVQIDYRLYKTAQGW RVYDLNVLGAWLIQTYQQQFSEKIQQSGVDGLIQFLTERNQQLASGKQAS
Sequences:
>Translated_210_residues MKKLFLIPVLAALFSFGAAAAHAEVDQSNPQALIKSATQQVLDEVRTQTIKQGDTARIMTIVNKDILPYTDFRRTTQLAM GRNWRTATPAQQQQVIEQFKQLLIRTYSGALAQLKPDQQIQYPPFRADADATDVVVRTVAMNNGQPVQIDYRLYKTAQGW RVYDLNVLGAWLIQTYQQQFSEKIQQSGVDGLIQFLTERNQQLASGKQAS >Mature_210_residues MKKLFLIPVLAALFSFGAAAAHAEVDQSNPQALIKSATQQVLDEVRTQTIKQGDTARIMTIVNKDILPYTDFRRTTQLAM GRNWRTATPAQQQQVIEQFKQLLIRTYSGALAQLKPDQQIQYPPFRADADATDVVVRTVAMNNGQPVQIDYRLYKTAQGW RVYDLNVLGAWLIQTYQQQFSEKIQQSGVDGLIQFLTERNQQLASGKQAS
Specific function: Actively prevents phospholipid accumulation at the cell surface. Probably maintains lipid asymmetry in the outer membrane by retrograde trafficking of phospholipids from the outer membrane to the inner membrane. May transfer phospholipid across the peripl
COG id: COG2854
COG function: function code Q; ABC-type transport system involved in resistance to organic solvents, auxiliary component
Gene ontology:
Cell location: Periplasm (Probable) [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the mlaC/ttg2D family [H]
Homologues:
Organism=Escherichia coli, GI1789583, Length=199, Percent_Identity=29.6482412060301, Blast_Score=89, Evalue=3e-19,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR023094 - InterPro: IPR008869 [H]
Pfam domain/function: PF05494 Tol_Tol_Ttg2 [H]
EC number: NA
Molecular weight: Translated: 23689; Mature: 23689
Theoretical pI: Translated: 9.93; Mature: 9.93
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 1.9 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 1.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKKLFLIPVLAALFSFGAAAAHAEVDQSNPQALIKSATQQVLDEVRTQTIKQGDTARIMT CCCHHHHHHHHHHHHHCHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHH IVNKDILPYTDFRRTTQLAMGRNWRTATPAQQQQVIEQFKQLLIRTYSGALAQLKPDQQI HHCCCCCCCHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHCCHHHHCCCCCCC QYPPFRADADATDVVVRTVAMNNGQPVQIDYRLYKTAQGWRVYDLNVLGAWLIQTYQQQF CCCCCCCCCCHHHHHHHHHCCCCCCEEEEEHEEEECCCCCEEEEHHHHHHHHHHHHHHHH SEKIQQSGVDGLIQFLTERNQQLASGKQAS HHHHHHCCHHHHHHHHHHHHHHHHCCCCCC >Mature Secondary Structure MKKLFLIPVLAALFSFGAAAAHAEVDQSNPQALIKSATQQVLDEVRTQTIKQGDTARIMT CCCHHHHHHHHHHHHHCHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHH IVNKDILPYTDFRRTTQLAMGRNWRTATPAQQQQVIEQFKQLLIRTYSGALAQLKPDQQI HHCCCCCCCHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHCCHHHHCCCCCCC QYPPFRADADATDVVVRTVAMNNGQPVQIDYRLYKTAQGWRVYDLNVLGAWLIQTYQQQF CCCCCCCCCCHHHHHHHHHCCCCCCEEEEEHEEEECCCCCEEEEHHHHHHHHHHHHHHHH SEKIQQSGVDGLIQFLTERNQQLASGKQAS HHHHHHCCHHHHHHHHHHHHHHHHCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9278503 [H]