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The map label for this gene is sspB [H]

Identifier: 53720726

GI number: 53720726

Start: 3724956

End: 3725513

Strand: Reverse

Name: sspB [H]

Synonym: BPSL3119

Alternate gene names: 53720726

Gene position: 3725513-3724956 (Counterclockwise)

Preceding gene: 53720727

Following gene: 53720725

Centisome position: 91.43

GC content: 64.87

Gene sequence:

>558_bases
TTGCGCCGCCGCGTCCGTTTCCGTTCGAGGATGGCGATGCAAGAGATTTCCACGAAGCCGTATTTGCTGCGCGCGCTGTA
CGAATGGTGCACGGATAACGGATACACACCCCATATCGCGGTGCGGGTCGACAAGTCGACGCGCGTGCCGCGCCAGTTCG
TGCGCGATGGGGAGATCGTGTTGAACATCAGCTTCGAGGCGACGAGCCAGCTGCAGATGGGCAACGAATGGATCGAGTTC
ACCGCGCGGTTTTCGGGCAAGGCGCACAAGCTCGAGGTGCCGGTTGCGAACGTGCTTGCGATCTACGCACGGGAGAACGG
CCAGGGGATGGCGTTTCAGGTCGACGTTGCCGCGGAGACGGGCGAGGCTGACGGTAGCGACGCGCTTGCTGTGGTAGAGG
AAGGGGACGATGCGGGCGCGCGCCACGCTTCAGCCGACGGCGCAGCCGAGGCGGCGCCCGAGCCCGGTGACGCTGCGGAG
GAGTTGCCGAAGTCCGATGGCGATGGCGACGGTGATGGGGCGAAAGGCAGCCGGCCTCGCCTCAAGATCGTGAAATGA

Upstream 100 bases:

>100_bases
GCGGATTTTCAGCCGTCCTGCTTATATCGAAGCGCTGACGCCGTCCGAAAAGGTCATGCGTCGTTAAGCTGTATGTGACT
GGGGAGCGGATGCGGCGGCA

Downstream 100 bases:

>100_bases
GGTAGAATTTCCGGCTCAACGCCGGCTTAGCTCATCTGGTAGAGCAGTTGATTTGTAATCATCAGGTGGCGGGTTCGAGT
CCTGCAGCCGGCACCAGACA

Product: ClpXP protease specificity-enhancing factor

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 185; Mature: 185

Protein sequence:

>185_residues
MRRRVRFRSRMAMQEISTKPYLLRALYEWCTDNGYTPHIAVRVDKSTRVPRQFVRDGEIVLNISFEATSQLQMGNEWIEF
TARFSGKAHKLEVPVANVLAIYARENGQGMAFQVDVAAETGEADGSDALAVVEEGDDAGARHASADGAAEAAPEPGDAAE
ELPKSDGDGDGDGAKGSRPRLKIVK

Sequences:

>Translated_185_residues
MRRRVRFRSRMAMQEISTKPYLLRALYEWCTDNGYTPHIAVRVDKSTRVPRQFVRDGEIVLNISFEATSQLQMGNEWIEF
TARFSGKAHKLEVPVANVLAIYARENGQGMAFQVDVAAETGEADGSDALAVVEEGDDAGARHASADGAAEAAPEPGDAAE
ELPKSDGDGDGDGAKGSRPRLKIVK
>Mature_185_residues
MRRRVRFRSRMAMQEISTKPYLLRALYEWCTDNGYTPHIAVRVDKSTRVPRQFVRDGEIVLNISFEATSQLQMGNEWIEF
TARFSGKAHKLEVPVANVLAIYARENGQGMAFQVDVAAETGEADGSDALAVVEEGDDAGARHASADGAAEAAPEPGDAAE
ELPKSDGDGDGDGAKGSRPRLKIVK

Specific function: Seems to act in concert with sspA in the regulation of several proteins during exponential and stationary-phase growth. The exact function of sspB is not yet known [H]

COG id: COG2969

COG function: function code R; Stringent starvation protein B

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI1789623, Length=124, Percent_Identity=43.5483870967742, Blast_Score=105, Evalue=1e-24,

Paralogues:

None

Copy number: 297 Molecules/Cell In: Growth Phase, Glucose-minimal MOPS Media. [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR007481 [H]

Pfam domain/function: PF04386 SspB [H]

EC number: NA

Molecular weight: Translated: 20123; Mature: 20123

Theoretical pI: Translated: 4.96; Mature: 4.96

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRRRVRFRSRMAMQEISTKPYLLRALYEWCTDNGYTPHIAVRVDKSTRVPRQFVRDGEIV
CCCCHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCCCCEEEEEECCCCCCCHHHHCCCCEE
LNISFEATSQLQMGNEWIEFTARFSGKAHKLEVPVANVLAIYARENGQGMAFQVDVAAET
EEEECCCCCCHHCCCCEEEEEEECCCCCEEEECCHHHEEEEEEECCCCCEEEEEEEEECC
GEADGSDALAVVEEGDDAGARHASADGAAEAAPEPGDAAEELPKSDGDGDGDGAKGSRPR
CCCCCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCCCHHHHCCCCCCCCCCCCCCCCCCC
LKIVK
EEEEC
>Mature Secondary Structure
MRRRVRFRSRMAMQEISTKPYLLRALYEWCTDNGYTPHIAVRVDKSTRVPRQFVRDGEIV
CCCCHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCCCCEEEEEECCCCCCCHHHHCCCCEE
LNISFEATSQLQMGNEWIEFTARFSGKAHKLEVPVANVLAIYARENGQGMAFQVDVAAET
EEEECCCCCCHHCCCCEEEEEEECCCCCEEEECCHHHEEEEEEECCCCCEEEEEEEEECC
GEADGSDALAVVEEGDDAGARHASADGAAEAAPEPGDAAEELPKSDGDGDGDGAKGSRPR
CCCCCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCCCHHHHCCCCCCCCCCCCCCCCCCC
LKIVK
EEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7542800 [H]