| Definition | Burkholderia pseudomallei K96243 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_006350 |
| Length | 4,074,542 |
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The map label for this gene is 53720696
Identifier: 53720696
GI number: 53720696
Start: 3682680
End: 3683882
Strand: Reverse
Name: 53720696
Synonym: BPSL3087
Alternate gene names: NA
Gene position: 3683882-3682680 (Counterclockwise)
Preceding gene: 53720697
Following gene: 53720695
Centisome position: 90.41
GC content: 65.84
Gene sequence:
>1203_bases ATGCCGCTCGGCGCGTCCGTATGCGCCGAGGTCTGCGCGTGTCGCCGTTTCGCGCGCAGCGCCCGCCGTACGATCGATCC AGCCATGTCCGATTCCACCCGCCCGAGCCGTTTCGCGCACGTCGATGCGATGCGCGCCGTCGCCGTGCTGTTCGTCATGT GGACGCATTACGCCGAGCTGTTCGACAAGCTCGCCGGCTCGCAGCACGGGCTCGATGCGCTGCAGCGCTCGGTGAACTTC GGGCGCATCGGCGTCGTCATCTTCTTTTGCATCAGCGGGATGCTGATTCCGACCAGCCTGCGCGGCGCGCCCGCGGAAGG CACGCGCCGCTTCGTCGTGCGCCGCTTCTTTCGGCTCTACCCGGCATTCTGGCTGTCACTGCCGCTCGGCTATCTCGTGT ACTGGCTGCTGTTCGGACAGCGCATGGATGCATCCGGCCTGCTCGCGAACGTGACGATGATCCCCACCGCGTTCGGCCGC GATCCGGTGATGGGGCACTACTGGACGCTCGAAACCGAGCTGTACTTCTACGTGCTGTGCGTGCTGCTGTTCCGCATCGG CGCACTGCATCGCATGCGCGACCTGTGCGCCGTCTGCGCGGGGCTCTGCGTGCTCTTCGTCGTCACGTCGGCGCTGAAGA TCGTTCCGGCGAGCGCGCTCGGCCAGTACAAGGGGATGCTCTATCACCTCGCAATCATGTTCTGGGGCGCCTGCTTCAGG CAGGCATACGAGGCGCCGTCGAAGACGTTCGAATGGATGCGCGGCCGGCGGCCGATCACGTATCGCGCGGCGACGATCGC GCTCGCGCTCCTCATCGTGTCGATCTCGCTGCTGATGGCGGCGGCGAACTGGCGGCACGGCGATTTCGTGCACCTGTCGG CGTCGTTCGGCTACGTGCTCGGCATGGCGATTTTCGTTGTGCTCGCAACTGTATTGAAGATTCGCCTGCGGCTCTTCGCG TGGCTCGGCGAGATCAGCTACTCGATCTACCTGCTGCACGGCATTCCGCTATACCTGTTGCTGTGGGCGTGCGAACGATA CGGAATCACGGATTTGCCGCTCGGCTTCTACATGGCGTTGCCGGTGCTGCCGGCGATCGCGCTGTCGTGGGCGAGCCATC GGCTCTGCGAAGCGCCGTTCGTGCGCTTCGCGCATGCGCTGACGCCGAAGCGTCGCGCCGCGGCCGCGGCGGCGAAGGTC TGA
Upstream 100 bases:
>100_bases TGCCGCCTGACTGATCGATCCTGCCGGCCGGACGCCGCTGCGTGCGGTGCCGCACGGAAAGCGCGCGCGCCGTGCGTTAC GGTGTGGTGACGAGGCGGCG
Downstream 100 bases:
>100_bases CGAAAGCGGGCAGGGCGCACGGCGTCGGGGCTTGCCGATCGTCGGCCGCCTATCGTCGAGCGGCCGCTATCGCGTTACGC GCCGTTCCGCGCTCGCGCAT
Product: putative acyltransferase
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 400; Mature: 399
Protein sequence:
>400_residues MPLGASVCAEVCACRRFARSARRTIDPAMSDSTRPSRFAHVDAMRAVAVLFVMWTHYAELFDKLAGSQHGLDALQRSVNF GRIGVVIFFCISGMLIPTSLRGAPAEGTRRFVVRRFFRLYPAFWLSLPLGYLVYWLLFGQRMDASGLLANVTMIPTAFGR DPVMGHYWTLETELYFYVLCVLLFRIGALHRMRDLCAVCAGLCVLFVVTSALKIVPASALGQYKGMLYHLAIMFWGACFR QAYEAPSKTFEWMRGRRPITYRAATIALALLIVSISLLMAAANWRHGDFVHLSASFGYVLGMAIFVVLATVLKIRLRLFA WLGEISYSIYLLHGIPLYLLLWACERYGITDLPLGFYMALPVLPAIALSWASHRLCEAPFVRFAHALTPKRRAAAAAAKV
Sequences:
>Translated_400_residues MPLGASVCAEVCACRRFARSARRTIDPAMSDSTRPSRFAHVDAMRAVAVLFVMWTHYAELFDKLAGSQHGLDALQRSVNF GRIGVVIFFCISGMLIPTSLRGAPAEGTRRFVVRRFFRLYPAFWLSLPLGYLVYWLLFGQRMDASGLLANVTMIPTAFGR DPVMGHYWTLETELYFYVLCVLLFRIGALHRMRDLCAVCAGLCVLFVVTSALKIVPASALGQYKGMLYHLAIMFWGACFR QAYEAPSKTFEWMRGRRPITYRAATIALALLIVSISLLMAAANWRHGDFVHLSASFGYVLGMAIFVVLATVLKIRLRLFA WLGEISYSIYLLHGIPLYLLLWACERYGITDLPLGFYMALPVLPAIALSWASHRLCEAPFVRFAHALTPKRRAAAAAAKV >Mature_399_residues PLGASVCAEVCACRRFARSARRTIDPAMSDSTRPSRFAHVDAMRAVAVLFVMWTHYAELFDKLAGSQHGLDALQRSVNFG RIGVVIFFCISGMLIPTSLRGAPAEGTRRFVVRRFFRLYPAFWLSLPLGYLVYWLLFGQRMDASGLLANVTMIPTAFGRD PVMGHYWTLETELYFYVLCVLLFRIGALHRMRDLCAVCAGLCVLFVVTSALKIVPASALGQYKGMLYHLAIMFWGACFRQ AYEAPSKTFEWMRGRRPITYRAATIALALLIVSISLLMAAANWRHGDFVHLSASFGYVLGMAIFVVLATVLKIRLRLFAW LGEISYSIYLLHGIPLYLLLWACERYGITDLPLGFYMALPVLPAIALSWASHRLCEAPFVRFAHALTPKRRAAAAAAKV
Specific function: Unknown
COG id: COG1835
COG function: function code I; Predicted acyltransferases
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 44789; Mature: 44658
Theoretical pI: Translated: 10.06; Mature: 10.06
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.8 %Cys (Translated Protein) 3.8 %Met (Translated Protein) 6.5 %Cys+Met (Translated Protein) 2.8 %Cys (Mature Protein) 3.5 %Met (Mature Protein) 6.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPLGASVCAEVCACRRFARSARRTIDPAMSDSTRPSRFAHVDAMRAVAVLFVMWTHYAEL CCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH FDKLAGSQHGLDALQRSVNFGRIGVVIFFCISGMLIPTSLRGAPAEGTRRFVVRRFFRLY HHHHCCCCCCHHHHHHHCCCCHHHHHHHHHHCCCEECCCCCCCCCCHHHHHHHHHHHHHH PAFWLSLPLGYLVYWLLFGQRMDASGLLANVTMIPTAFGRDPVMGHYWTLETELYFYVLC HHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHCCCCCCCCCCCCCEEEEHHHHHHHHHH VLLFRIGALHRMRDLCAVCAGLCVLFVVTSALKIVPASALGQYKGMLYHLAIMFWGACFR HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHH QAYEAPSKTFEWMRGRRPITYRAATIALALLIVSISLLMAAANWRHGDFVHLSASFGYVL HHHHCHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEHHHHHHHH GMAIFVVLATVLKIRLRLFAWLGEISYSIYLLHGIPLYLLLWACERYGITDLPLGFYMAL HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHH PVLPAIALSWASHRLCEAPFVRFAHALTPKRRAAAAAAKV HHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHCCC >Mature Secondary Structure PLGASVCAEVCACRRFARSARRTIDPAMSDSTRPSRFAHVDAMRAVAVLFVMWTHYAEL CCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH FDKLAGSQHGLDALQRSVNFGRIGVVIFFCISGMLIPTSLRGAPAEGTRRFVVRRFFRLY HHHHCCCCCCHHHHHHHCCCCHHHHHHHHHHCCCEECCCCCCCCCCHHHHHHHHHHHHHH PAFWLSLPLGYLVYWLLFGQRMDASGLLANVTMIPTAFGRDPVMGHYWTLETELYFYVLC HHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHCCCCCCCCCCCCCEEEEHHHHHHHHHH VLLFRIGALHRMRDLCAVCAGLCVLFVVTSALKIVPASALGQYKGMLYHLAIMFWGACFR HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHH QAYEAPSKTFEWMRGRRPITYRAATIALALLIVSISLLMAAANWRHGDFVHLSASFGYVL HHHHCHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEHHHHHHHH GMAIFVVLATVLKIRLRLFAWLGEISYSIYLLHGIPLYLLLWACERYGITDLPLGFYMAL HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHH PVLPAIALSWASHRLCEAPFVRFAHALTPKRRAAAAAAKV HHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA