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The map label for this gene is ycdI [C]

Identifier: 53720690

GI number: 53720690

Start: 3675933

End: 3676550

Strand: Reverse

Name: ycdI [C]

Synonym: BPSL3081

Alternate gene names: 53720690

Gene position: 3676550-3675933 (Counterclockwise)

Preceding gene: 53720691

Following gene: 53720689

Centisome position: 90.23

GC content: 67.64

Gene sequence:

>618_bases
GTGAGGAAACGCATGTCCGTCAAACCCGCTCCCACTTCCGTTTCGATTCACGAACTGATCGCCGGCCGCTGGAGCCCGCG
CGCGTATTCGAGCGAGCCCGTTAGCGCCGAGCATCTGCACGCCGTGCTCGAAGCGGCGCGCTGGGCGCCGTCCGCGTACA
ACGCGCAACCGTGGCGCTTCATCGTATTCGACCGCAGCAAGGACGAGGTCGCGTTCAAGCGCGCATTCTCGACGCTCGTG
CCGTTCAACCAGGGCTGGAACGCACCGGCGCCCGTGCTGATCGCGGTCACCGCGCACACGCTCACGTCGAAGGGCGAGCC
GAGTCCGACGGCGCTCTACGACGCCGGCGCGGCCGCGATGTCGCTCGTGTTGCAAGCGCACGCGCTCGGTCTCGCCGCGC
ACCAGATGAGCGGTTTCGACGTGAAGGCGTTCCGCGCCGCATTCGCGATTCCCGCCGACGTCGAGCCGCTCGCGATCATC
TCGATCGGCCATTACGGCGATGCGGACAAACTCGATCCGGTGCTGCGCGAGCGCGAACGCGCGGTGCGCACGCGCCATCC
GATCGGTGAGGTCGTCTACGCGCACGCGTGGCAGAAGCCGTTCCCGTCGGCAGATTGA

Upstream 100 bases:

>100_bases
TACGCCGATTTGCATTCGCGCGCACGCTCCGGCAAGTTCGTCGACAAGCGGTTATGCTGGCGTTTCTTTTTCCGGGCGAC
CGAGCCCTTTTTAAAGATAG

Downstream 100 bases:

>100_bases
CGTGACGCAGCGTGCGGCCCGCACGCGAGGCGCCACGGTAGGGCCGCGCGCGCCGGGGCCGCCGGTCGGGCGGTCGCGGG
CGGGGCGCCCCTTGCTGGCC

Product: putative oxidoreductase

Products: NA

Alternate protein names: Nitroreductase Family Protein; Oxidoreductase; NAD(P)H-Flavin Oxidoreductase; Bacterioferritin Comigratory Protein/NADH Dehydrogenase; Oxidoreductase Protein; Oxygen-Insensitive Nitroreductase; NADH Dehydrogenase/NAD(P)H Nitroreductase

Number of amino acids: Translated: 205; Mature: 205

Protein sequence:

>205_residues
MRKRMSVKPAPTSVSIHELIAGRWSPRAYSSEPVSAEHLHAVLEAARWAPSAYNAQPWRFIVFDRSKDEVAFKRAFSTLV
PFNQGWNAPAPVLIAVTAHTLTSKGEPSPTALYDAGAAAMSLVLQAHALGLAAHQMSGFDVKAFRAAFAIPADVEPLAII
SIGHYGDADKLDPVLRERERAVRTRHPIGEVVYAHAWQKPFPSAD

Sequences:

>Translated_205_residues
MRKRMSVKPAPTSVSIHELIAGRWSPRAYSSEPVSAEHLHAVLEAARWAPSAYNAQPWRFIVFDRSKDEVAFKRAFSTLV
PFNQGWNAPAPVLIAVTAHTLTSKGEPSPTALYDAGAAAMSLVLQAHALGLAAHQMSGFDVKAFRAAFAIPADVEPLAII
SIGHYGDADKLDPVLRERERAVRTRHPIGEVVYAHAWQKPFPSAD
>Mature_205_residues
MRKRMSVKPAPTSVSIHELIAGRWSPRAYSSEPVSAEHLHAVLEAARWAPSAYNAQPWRFIVFDRSKDEVAFKRAFSTLV
PFNQGWNAPAPVLIAVTAHTLTSKGEPSPTALYDAGAAAMSLVLQAHALGLAAHQMSGFDVKAFRAAFAIPADVEPLAII
SIGHYGDADKLDPVLRERERAVRTRHPIGEVVYAHAWQKPFPSAD

Specific function: Unknown

COG id: COG0778

COG function: function code C; Nitroreductase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: 1.-.-.- [C]

Molecular weight: Translated: 22384; Mature: 22384

Theoretical pI: Translated: 9.71; Mature: 9.71

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
2.0 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
2.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRKRMSVKPAPTSVSIHELIAGRWSPRAYSSEPVSAEHLHAVLEAARWAPSAYNAQPWRF
CCCCCCCCCCCCCCHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCEEE
IVFDRSKDEVAFKRAFSTLVPFNQGWNAPAPVLIAVTAHTLTSKGEPSPTALYDAGAAAM
EEEECCCHHHHHHHHHHHHCCCCCCCCCCCCEEEEEEEHHHCCCCCCCCCHHHHHHHHHH
SLVLQAHALGLAAHQMSGFDVKAFRAAFAIPADVEPLAIISIGHYGDADKLDPVLRERER
HHHHHHHHHHHHHHHCCCCCHHHHHHHHCCCCCCCCEEEEEECCCCCHHHHHHHHHHHHH
AVRTRHPIGEVVYAHAWQKPFPSAD
HHHHHCCHHHHHHHHHCCCCCCCCC
>Mature Secondary Structure
MRKRMSVKPAPTSVSIHELIAGRWSPRAYSSEPVSAEHLHAVLEAARWAPSAYNAQPWRF
CCCCCCCCCCCCCCHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCEEE
IVFDRSKDEVAFKRAFSTLVPFNQGWNAPAPVLIAVTAHTLTSKGEPSPTALYDAGAAAM
EEEECCCHHHHHHHHHHHHCCCCCCCCCCCCEEEEEEEHHHCCCCCCCCCHHHHHHHHHH
SLVLQAHALGLAAHQMSGFDVKAFRAAFAIPADVEPLAIISIGHYGDADKLDPVLRERER
HHHHHHHHHHHHHHHCCCCCHHHHHHHHCCCCCCCCEEEEEECCCCCHHHHHHHHHHHHH
AVRTRHPIGEVVYAHAWQKPFPSAD
HHHHHCCHHHHHHHHHCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: Fmn (Potential) [C]

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA