Click here to switch to the map view.

The map label for this gene is alc2 [H]

Identifier: 53720553

GI number: 53720553

Start: 3515274

End: 3516284

Strand: Reverse

Name: alc2 [H]

Synonym: BPSL2945

Alternate gene names: 53720553

Gene position: 3516284-3515274 (Counterclockwise)

Preceding gene: 53720554

Following gene: 53720552

Centisome position: 86.3

GC content: 70.33

Gene sequence:

>1011_bases
ATGGCCGCCCCGATTCTCGATCCGAACGCACCCGCGTTCACGCGCCGCTACATGAATCTCGCCGACCCGCGCCTCGGTGC
GAAGGCGCTCTTCGCGAGCGACGAATTCTTCGCGCCGAAGGAGCGGATGCTCGATCCCGAGCCCGCCGTGTTCATTCCCG
GCAAGTACGACGACCACGGCAAATGGATGGACGGCTGGGAGACGCGCCGCAAGCGCACGACGGGGCACGACTTCTGCGTC
GTGCGGCTCGCGCGGCCGGGCGTGGTGTACGGCGTCGATCTCGACACGAGCCACTTCACCGGCAATTTCCCGCCCGCCGC
GTCGATCGACGCATGCGTGTCGGACGCCGACACGCCGCCCGACGACGCCGTCTGGGAAACGCTCGTGCCGGCGACGACGC
TCGCCGGCAATCAGCATCACTACGTCGACGTGAGCAATCCTCGCGCCTATACGCACCTGCGCGTGAACCTGTATCCGGAC
GGCGGGCTCGCGCGGCTGCGCGTGTACGGCCAGCCGCAGCGCGACTGGAGCCGCGCGGCGCGCGGCGAGCTCGTCGATCT
GGCCGCGATCGAGAACGGCGCGTATCTCGTCGCCGCGAACAACGAGCACTTCGGCCCCGCGTCGCGGATGCTGATGCCCG
GGCGCGGCGCGAACATGGGCGACGGCTGGGAGACGCGGCGCCGCCGCGAGCCCGGCAACGACTGGGCGATCGTCGCGCTC
GCGCGGCCCGGCGTGATTCGTAGGGTCGAAGTCGATACCGCGCACTTCAAGGGCAATTTCCCGGACCGCTGCTCGCTGCA
GGCGGCGCGCGTCGCGGGCGGCACGGACGCGTCGCTCGTCACGCAGGCGATGTTCTGGCCGATGCTGCTCGGCGAGCAGC
CGCTCGGGATGGATAGCGTGCATACGTTCGAGACGCAGCTCGCGGCGCTCGGCCCCGTCACGCACGTGCGGCTGAACATC
CATCCGGACGGCGGCGTGTCGCGCCTGCGCCTCTGGGGCGAGCTCGCATAA

Upstream 100 bases:

>100_bases
AGCTTCGCGCCGGCGCTTCGTTTTTCAGGCTGGCGCAATGGCCGCCGATTTTTCCGCCGGTTTTCCGCTTTCGGACACAC
ATTCAATAACAGGAGACGAC

Downstream 100 bases:

>100_bases
ACGGAGGCCGCCCATGCAGACGCTGCACACCCTGCGCCTCGAGCGCCTGACGCGGGAAGCGTTCGCGCCGTTCGGCGACG
TGATCGAGCTGGCGGGCGCG

Product: allantoicase

Products: NA

Alternate protein names: Allantoate amidinohydrolase 2 [H]

Number of amino acids: Translated: 336; Mature: 335

Protein sequence:

>336_residues
MAAPILDPNAPAFTRRYMNLADPRLGAKALFASDEFFAPKERMLDPEPAVFIPGKYDDHGKWMDGWETRRKRTTGHDFCV
VRLARPGVVYGVDLDTSHFTGNFPPAASIDACVSDADTPPDDAVWETLVPATTLAGNQHHYVDVSNPRAYTHLRVNLYPD
GGLARLRVYGQPQRDWSRAARGELVDLAAIENGAYLVAANNEHFGPASRMLMPGRGANMGDGWETRRRREPGNDWAIVAL
ARPGVIRRVEVDTAHFKGNFPDRCSLQAARVAGGTDASLVTQAMFWPMLLGEQPLGMDSVHTFETQLAALGPVTHVRLNI
HPDGGVSRLRLWGELA

Sequences:

>Translated_336_residues
MAAPILDPNAPAFTRRYMNLADPRLGAKALFASDEFFAPKERMLDPEPAVFIPGKYDDHGKWMDGWETRRKRTTGHDFCV
VRLARPGVVYGVDLDTSHFTGNFPPAASIDACVSDADTPPDDAVWETLVPATTLAGNQHHYVDVSNPRAYTHLRVNLYPD
GGLARLRVYGQPQRDWSRAARGELVDLAAIENGAYLVAANNEHFGPASRMLMPGRGANMGDGWETRRRREPGNDWAIVAL
ARPGVIRRVEVDTAHFKGNFPDRCSLQAARVAGGTDASLVTQAMFWPMLLGEQPLGMDSVHTFETQLAALGPVTHVRLNI
HPDGGVSRLRLWGELA
>Mature_335_residues
AAPILDPNAPAFTRRYMNLADPRLGAKALFASDEFFAPKERMLDPEPAVFIPGKYDDHGKWMDGWETRRKRTTGHDFCVV
RLARPGVVYGVDLDTSHFTGNFPPAASIDACVSDADTPPDDAVWETLVPATTLAGNQHHYVDVSNPRAYTHLRVNLYPDG
GLARLRVYGQPQRDWSRAARGELVDLAAIENGAYLVAANNEHFGPASRMLMPGRGANMGDGWETRRRREPGNDWAIVALA
RPGVIRRVEVDTAHFKGNFPDRCSLQAARVAGGTDASLVTQAMFWPMLLGEQPLGMDSVHTFETQLAALGPVTHVRLNIH
PDGGVSRLRLWGELA

Specific function: Unknown

COG id: COG4266

COG function: function code F; Allantoicase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the allantoicase family [H]

Homologues:

Organism=Homo sapiens, GI144953901, Length=365, Percent_Identity=38.9041095890411, Blast_Score=249, Evalue=2e-66,
Organism=Saccharomyces cerevisiae, GI6322220, Length=330, Percent_Identity=34.2424242424242, Blast_Score=213, Evalue=5e-56,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005164
- InterPro:   IPR015908
- InterPro:   IPR008979 [H]

Pfam domain/function: PF03561 Allantoicase [H]

EC number: =3.5.3.4 [H]

Molecular weight: Translated: 36972; Mature: 36841

Theoretical pI: Translated: 6.74; Mature: 6.74

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
3.0 %Met     (Translated Protein)
3.9 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
3.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAAPILDPNAPAFTRRYMNLADPRLGAKALFASDEFFAPKERMLDPEPAVFIPGKYDDHG
CCCCCCCCCCCHHHHHHHHHCCCCCCCEEEECCCCCCCCHHHCCCCCCCEEECCCCCCCC
KWMDGWETRRKRTTGHDFCVVRLARPGVVYGVDLDTSHFTGNFPPAASIDACVSDADTPP
CCCCCHHHHHHCCCCCCEEEEEEECCCEEEEEECCCCCCCCCCCCCCCHHHHHCCCCCCC
DDAVWETLVPATTLAGNQHHYVDVSNPRAYTHLRVNLYPDGGLARLRVYGQPQRDWSRAA
CHHHHHHHCCHHHCCCCCEEEEECCCCCEEEEEEEEEECCCCEEEEEEECCCCHHHHHHH
RGELVDLAAIENGAYLVAANNEHFGPASRMLMPGRGANMGDGWETRRRREPGNDWAIVAL
CCCEEEEEEECCCEEEEEECCCCCCCHHCEEECCCCCCCCCCHHHHHCCCCCCCEEEEEE
ARPGVIRRVEVDTAHFKGNFPDRCSLQAARVAGGTDASLVTQAMFWPMLLGEQPLGMDSV
ECCCEEEEEEECCCEECCCCCCCCCCEEEEECCCCCHHHHHHHHHHHHHHCCCCCCCCCH
HTFETQLAALGPVTHVRLNIHPDGGVSRLRLWGELA
HHHHHHHHHCCCEEEEEEEECCCCCCEEEEEEECCC
>Mature Secondary Structure 
AAPILDPNAPAFTRRYMNLADPRLGAKALFASDEFFAPKERMLDPEPAVFIPGKYDDHG
CCCCCCCCCCHHHHHHHHHCCCCCCCEEEECCCCCCCCHHHCCCCCCCEEECCCCCCCC
KWMDGWETRRKRTTGHDFCVVRLARPGVVYGVDLDTSHFTGNFPPAASIDACVSDADTPP
CCCCCHHHHHHCCCCCCEEEEEEECCCEEEEEECCCCCCCCCCCCCCCHHHHHCCCCCCC
DDAVWETLVPATTLAGNQHHYVDVSNPRAYTHLRVNLYPDGGLARLRVYGQPQRDWSRAA
CHHHHHHHCCHHHCCCCCEEEEECCCCCEEEEEEEEEECCCCEEEEEEECCCCHHHHHHH
RGELVDLAAIENGAYLVAANNEHFGPASRMLMPGRGANMGDGWETRRRREPGNDWAIVAL
CCCEEEEEEECCCEEEEEECCCCCCCHHCEEECCCCCCCCCCHHHHHCCCCCCCEEEEEE
ARPGVIRRVEVDTAHFKGNFPDRCSLQAARVAGGTDASLVTQAMFWPMLLGEQPLGMDSV
ECCCEEEEEEECCCEECCCCCCCCCCEEEEECCCCCHHHHHHHHHHHHHHCCCCCCCCCH
HTFETQLAALGPVTHVRLNIHPDGGVSRLRLWGELA
HHHHHHHHHCCCEEEEEEEECCCCCCEEEEEEECCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA