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The map label for this gene is 53720542

Identifier: 53720542

GI number: 53720542

Start: 3504716

End: 3505138

Strand: Reverse

Name: 53720542

Synonym: BPSL2934

Alternate gene names: NA

Gene position: 3505138-3504716 (Counterclockwise)

Preceding gene: 161723197

Following gene: 53720540

Centisome position: 86.03

GC content: 63.59

Gene sequence:

>423_bases
ATGGCGATGCTCTGGGTCAAGACTTTTCATATCGTGCTGATCGCGTCGTGGTTCGCGGGGCTGTTCTATTTGCCGCGCAT
CTACGTGAACCTCGCGATGGAAACCGATCCCGCCGCGCGCCGGCGGCTGCTCGCGATGGCGCGCAAGCTGTTGCGCTTCA
TGACGATCATCGCGGTGCCCGCGCTCGCGTGCGGTTTGTGGCTGTGGCTCGTGATCGGCATCGGGCAGGGGCAGGGCTGG
GTGCACGCGAAGCTCGGGGTCGTGCTGTTGCTTGTCGTCTATCACGCGTACTGCGGGCATTTGCTGAAGGTGTTCGAGCG
CGGCGAGAACCGCCGCTCGGACAAGTGGTATCGCGTGTTCAACGAATTGCCGGTGCTCGGGATGCTCGCGGCCGTCGCGC
TCGCGGTGATCAAGCCGTTTTGA

Upstream 100 bases:

>100_bases
TGCACGCGCGCGGCCCGGTCGGGCTCGAAGGTCTCACGTCGCTGAAGTACGTGGTGCTCGGGCACGGCGAAGGGCGTGAG
TGACGGCGGGGGAACGATCG

Downstream 100 bases:

>100_bases
GCGCGCGGGCGGCGCGGTTGGCGCGGTTGGCGTCGCGCCGCCTGACGGCGGTGCCGTCCGGATTCGATGAAGGTCGCCCC
GGCCCTGTGACCGGGGCCTT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 140; Mature: 139

Protein sequence:

>140_residues
MAMLWVKTFHIVLIASWFAGLFYLPRIYVNLAMETDPAARRRLLAMARKLLRFMTIIAVPALACGLWLWLVIGIGQGQGW
VHAKLGVVLLLVVYHAYCGHLLKVFERGENRRSDKWYRVFNELPVLGMLAAVALAVIKPF

Sequences:

>Translated_140_residues
MAMLWVKTFHIVLIASWFAGLFYLPRIYVNLAMETDPAARRRLLAMARKLLRFMTIIAVPALACGLWLWLVIGIGQGQGW
VHAKLGVVLLLVVYHAYCGHLLKVFERGENRRSDKWYRVFNELPVLGMLAAVALAVIKPF
>Mature_139_residues
AMLWVKTFHIVLIASWFAGLFYLPRIYVNLAMETDPAARRRLLAMARKLLRFMTIIAVPALACGLWLWLVIGIGQGQGWV
HAKLGVVLLLVVYHAYCGHLLKVFERGENRRSDKWYRVFNELPVLGMLAAVALAVIKPF

Specific function: Unknown

COG id: COG1981

COG function: function code S; Predicted membrane protein

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0093 family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR014351
- InterPro:   IPR008457
- InterPro:   IPR005265 [H]

Pfam domain/function: PF05425 CopD; PF03653 UPF0093 [H]

EC number: NA

Molecular weight: Translated: 15937; Mature: 15805

Theoretical pI: Translated: 10.74; Mature: 10.74

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
4.3 %Met     (Translated Protein)
5.7 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
3.6 %Met     (Mature Protein)
5.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAMLWVKTFHIVLIASWFAGLFYLPRIYVNLAMETDPAARRRLLAMARKLLRFMTIIAVP
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHH
ALACGLWLWLVIGIGQGQGWVHAKLGVVLLLVVYHAYCGHLLKVFERGENRRSDKWYRVF
HHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHH
NELPVLGMLAAVALAVIKPF
HHCCHHHHHHHHHHHHHCCC
>Mature Secondary Structure 
AMLWVKTFHIVLIASWFAGLFYLPRIYVNLAMETDPAARRRLLAMARKLLRFMTIIAVP
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHH
ALACGLWLWLVIGIGQGQGWVHAKLGVVLLLVVYHAYCGHLLKVFERGENRRSDKWYRVF
HHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHH
NELPVLGMLAAVALAVIKPF
HHCCHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9252185 [H]