| Definition | Burkholderia pseudomallei K96243 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_006350 |
| Length | 4,074,542 |
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The map label for this gene is yceI [C]
Identifier: 53720483
GI number: 53720483
Start: 3440083
End: 3440643
Strand: Reverse
Name: yceI [C]
Synonym: BPSL2875
Alternate gene names: 53720483
Gene position: 3440643-3440083 (Counterclockwise)
Preceding gene: 53720484
Following gene: 53720482
Centisome position: 84.44
GC content: 63.81
Gene sequence:
>561_bases ATGAAAGTCTCGTTCTACCGCTACATGCTCGCGGCGTTCGCCGCCGCCTCGGTCGTCGTGTCGGGCGCCGCGCTCGCGCA GGTCGATCTCGCGAAGAGCAAGGTATCGGCCGTCTCGAAGCAGATGAACGTGCCGACGGAGGGCGTGTTCAAGAAGTTTT CCGCGCAGATCAAGTTCGATCCGGCGAAGGCCGCGCAGGGCAGCGCGCAGATGACGATCGACGTCGCGAGCTATGATCTC GGCGACCAGATGTACAACGATCAGGTCGCGGGCAAGGACTGGTTCGACGCGAAGGCATACCCGCAGGCGAGCTTCGTGTC GACCGCGATCGCGCCGGCGGGCGGCAACAAGTACAACGTGTCCGGCAAGCTGACGATCAAGGGCAAGACGGTGCCCGTGA CCGTGCCCGTGACGGTCACGCAGAACGGCGCCGCGCAGGTGTTCGACGGCGTGCTGCCGATCAAGCGCTCGACGTTCAAC GTCGGCACGGGCGAATGGAAGGACACCTCGGTCGTCGCCGACGAAGTGCAGATCAAGTTTCACATCGTCGCCGCGAAGTA A
Upstream 100 bases:
>100_bases TCGTCGCCGCGCACGTCGCGGCGGCCGTCAAACACCAGTGGTTCGACCGCGACGGCGTGCTGTCGCGGATGCTTCCCTTC CTCAAATAACAAGGACCGTT
Downstream 100 bases:
>100_bases CGCGCGCGGCGGTTCGCACCACCCTCGCGCCGCGTCGGAGCGCGGCGCCGTCATAAGGAGATTGATTTGAACAAGCAACT GATGATCGCGGCGGGCGCGC
Product: hypothetical protein
Products: NA
Alternate protein names: Signal Peptide Protein; YceI Like Family; Cytochrome B; Ycei Family Protein; Signal Peptide; YceI-Like Family Protein; YceI/Cytochrome
Number of amino acids: Translated: 186; Mature: 186
Protein sequence:
>186_residues MKVSFYRYMLAAFAAASVVVSGAALAQVDLAKSKVSAVSKQMNVPTEGVFKKFSAQIKFDPAKAAQGSAQMTIDVASYDL GDQMYNDQVAGKDWFDAKAYPQASFVSTAIAPAGGNKYNVSGKLTIKGKTVPVTVPVTVTQNGAAQVFDGVLPIKRSTFN VGTGEWKDTSVVADEVQIKFHIVAAK
Sequences:
>Translated_186_residues MKVSFYRYMLAAFAAASVVVSGAALAQVDLAKSKVSAVSKQMNVPTEGVFKKFSAQIKFDPAKAAQGSAQMTIDVASYDL GDQMYNDQVAGKDWFDAKAYPQASFVSTAIAPAGGNKYNVSGKLTIKGKTVPVTVPVTVTQNGAAQVFDGVLPIKRSTFN VGTGEWKDTSVVADEVQIKFHIVAAK >Mature_186_residues MKVSFYRYMLAAFAAASVVVSGAALAQVDLAKSKVSAVSKQMNVPTEGVFKKFSAQIKFDPAKAAQGSAQMTIDVASYDL GDQMYNDQVAGKDWFDAKAYPQASFVSTAIAPAGGNKYNVSGKLTIKGKTVPVTVPVTVTQNGAAQVFDGVLPIKRSTFN VGTGEWKDTSVVADEVQIKFHIVAAK
Specific function: Unknown
COG id: COG2353
COG function: function code S; Uncharacterized conserved protein
Gene ontology:
Cell location: Periplasmic Protein [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: 40 Molecules/Cell In: Stationary Phase, Rich Media (Based on E. coli). [C]
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 19694; Mature: 19694
Theoretical pI: Translated: 9.99; Mature: 9.99
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 2.7 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.7 %Met (Mature Protein) 2.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKVSFYRYMLAAFAAASVVVSGAALAQVDLAKSKVSAVSKQMNVPTEGVFKKFSAQIKFD CCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCEEEEC PAKAAQGSAQMTIDVASYDLGDQMYNDQVAGKDWFDAKAYPQASFVSTAIAPAGGNKYNV HHHCCCCCCEEEEEEECCCCCCHHHCCCCCCCCCCCCCCCCCHHHHHHEECCCCCCEEEC SGKLTIKGKTVPVTVPVTVTQNGAAQVFDGVLPIKRSTFNVGTGEWKDTSVVADEVQIKF EEEEEECCCEEEEEEEEEEECCCHHHHHCCCCCCCCCEEECCCCCCCCCEEEEEEEEEEE HIVAAK EEEEEC >Mature Secondary Structure MKVSFYRYMLAAFAAASVVVSGAALAQVDLAKSKVSAVSKQMNVPTEGVFKKFSAQIKFD CCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCEEEEC PAKAAQGSAQMTIDVASYDLGDQMYNDQVAGKDWFDAKAYPQASFVSTAIAPAGGNKYNV HHHCCCCCCEEEEEEECCCCCCHHHCCCCCCCCCCCCCCCCCHHHHHHEECCCCCCEEEC SGKLTIKGKTVPVTVPVTVTQNGAAQVFDGVLPIKRSTFNVGTGEWKDTSVVADEVQIKF EEEEEECCCEEEEEEEEEEECCCHHHHHCCCCCCCCCEEECCCCCCCCCEEEEEEEEEEE HIVAAK EEEEEC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA