| Definition | Burkholderia pseudomallei K96243 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_006350 |
| Length | 4,074,542 |
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The map label for this gene is phnL [H]
Identifier: 53720460
GI number: 53720460
Start: 3414649
End: 3415446
Strand: Reverse
Name: phnL [H]
Synonym: BPSL2852
Alternate gene names: 53720460
Gene position: 3415446-3414649 (Counterclockwise)
Preceding gene: 53720461
Following gene: 53720459
Centisome position: 83.82
GC content: 72.81
Gene sequence:
>798_bases ATGCAAACCATCGAATCGTCCCGACGCGCCTGCGATCACGATCACGCCCGCGCGTTCGCCGGCAACGCGGCGCTGATGCT GCGCGCGGTCGGCGTCGGCAAGACGTTCACGCTGCATGCGCACGGCGGCATGACGATCGACGCGCTCGAGAACGTGTCGC TCGATGTCGAAGCGGGCGAGTGCGTCGCGCTCACGGGGCCGTCCGGCGCGGGCAAGAGCACGCTGCTGCGGTGCCTGTAC GGCAACTATCTCGCGAACCGCGGCACGATCGCGGTGCGCGCCGGCGCGCGCGCGGCGGAGCACGTCGTGCTGACGGCGTC CGAGCCGCACGAGGTGATCGCGCTGCGGCGCGACGTGATCGGCTACGTCAGCCAGTTCCTGCGGGCGATTCCGCGGGTGC CGGCGCTCGCGCTCGTCGCCGCGCCGCTCGTCGCGCGCGGCATGCCCGAAGGCGATGCGGCCGATCGCGCGGCGCATCTG CTCGCGCGCCTGAACGTGCCGCGCCGGCTGTGGACGCTCGCGCCCGCGACGTTTTCGGGCGGCGAGCAGCAGCGCGTGAA CATCGCGCGCGGGCTGATCGCCGAGCATCCGGTGCTGCTGCTCGACGAGCCGACGGCGTCGCTCGACGCGGAGAATCGCG ACGTCGTCGCCGAGCTGATCGGCGACGTGCGCCGGCGCGGCGCGGCGATCGTCGGCATCTTTCACGACGAAGCGACGCGC GAGCGCGTCGCGACGCGCTGTTTCCCGCTGCGCCCGCCGTCGCGCGCGCGGCTGCCCTTTGACGAAGTGAACGCTTAG
Upstream 100 bases:
>100_bases AGATCGTCGAGGCGGGGCTGACCGATCAGGTGCTCGACGATCCGCAACATCCGTACACGCAAATGCTCGTGTCGTCCGTT CTACCGGTATGAGGTTCGGC
Downstream 100 bases:
>100_bases CGAAGCGAACGATGTTGATCAGCAATGCGCGCGTCGTCACGCGCGACGACGTTTTCATCGGCACCGTGCAGATCGACGGC GAATCGATCCGCGCGGTGTC
Product: putative phosphonates transport ATP-binding protein PhnL
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 265; Mature: 265
Protein sequence:
>265_residues MQTIESSRRACDHDHARAFAGNAALMLRAVGVGKTFTLHAHGGMTIDALENVSLDVEAGECVALTGPSGAGKSTLLRCLY GNYLANRGTIAVRAGARAAEHVVLTASEPHEVIALRRDVIGYVSQFLRAIPRVPALALVAAPLVARGMPEGDAADRAAHL LARLNVPRRLWTLAPATFSGGEQQRVNIARGLIAEHPVLLLDEPTASLDAENRDVVAELIGDVRRRGAAIVGIFHDEATR ERVATRCFPLRPPSRARLPFDEVNA
Sequences:
>Translated_265_residues MQTIESSRRACDHDHARAFAGNAALMLRAVGVGKTFTLHAHGGMTIDALENVSLDVEAGECVALTGPSGAGKSTLLRCLY GNYLANRGTIAVRAGARAAEHVVLTASEPHEVIALRRDVIGYVSQFLRAIPRVPALALVAAPLVARGMPEGDAADRAAHL LARLNVPRRLWTLAPATFSGGEQQRVNIARGLIAEHPVLLLDEPTASLDAENRDVVAELIGDVRRRGAAIVGIFHDEATR ERVATRCFPLRPPSRARLPFDEVNA >Mature_265_residues MQTIESSRRACDHDHARAFAGNAALMLRAVGVGKTFTLHAHGGMTIDALENVSLDVEAGECVALTGPSGAGKSTLLRCLY GNYLANRGTIAVRAGARAAEHVVLTASEPHEVIALRRDVIGYVSQFLRAIPRVPALALVAAPLVARGMPEGDAADRAAHL LARLNVPRRLWTLAPATFSGGEQQRVNIARGLIAEHPVLLLDEPTASLDAENRDVVAELIGDVRRRGAAIVGIFHDEATR ERVATRCFPLRPPSRARLPFDEVNA
Specific function: Part of the binding-protein-dependent transport system for alkylphosphonates. Probably responsible for energy coupling to the transport system [H]
COG id: COG4778
COG function: function code P; ABC-type phosphonate transport system, ATPase component
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 ABC transporter domain [H]
Homologues:
Organism=Homo sapiens, GI105990541, Length=231, Percent_Identity=29.004329004329, Blast_Score=72, Evalue=4e-13, Organism=Homo sapiens, GI27881501, Length=206, Percent_Identity=28.6407766990291, Blast_Score=72, Evalue=6e-13, Organism=Homo sapiens, GI30795238, Length=206, Percent_Identity=28.6407766990291, Blast_Score=72, Evalue=6e-13, Organism=Homo sapiens, GI116734710, Length=205, Percent_Identity=28.2926829268293, Blast_Score=69, Evalue=4e-12, Organism=Homo sapiens, GI42741659, Length=205, Percent_Identity=29.7560975609756, Blast_Score=68, Evalue=9e-12, Organism=Homo sapiens, GI150417984, Length=208, Percent_Identity=31.25, Blast_Score=68, Evalue=1e-11, Organism=Homo sapiens, GI21536376, Length=199, Percent_Identity=27.1356783919598, Blast_Score=67, Evalue=2e-11, Organism=Homo sapiens, GI9961250, Length=202, Percent_Identity=31.1881188118812, Blast_Score=67, Evalue=2e-11, Organism=Homo sapiens, GI4505771, Length=202, Percent_Identity=31.1881188118812, Blast_Score=67, Evalue=2e-11, Organism=Homo sapiens, GI9961252, Length=202, Percent_Identity=31.1881188118812, Blast_Score=67, Evalue=2e-11, Organism=Escherichia coli, GI1790534, Length=225, Percent_Identity=56, Blast_Score=246, Evalue=9e-67, Organism=Escherichia coli, GI1787029, Length=209, Percent_Identity=34.9282296650718, Blast_Score=103, Evalue=9e-24, Organism=Escherichia coli, GI87081834, Length=207, Percent_Identity=33.8164251207729, Blast_Score=102, Evalue=2e-23, Organism=Escherichia coli, GI1789672, Length=201, Percent_Identity=33.3333333333333, Blast_Score=100, Evalue=2e-22, Organism=Escherichia coli, GI1787105, Length=225, Percent_Identity=34.2222222222222, Blast_Score=99, Evalue=2e-22, Organism=Escherichia coli, GI1786398, Length=220, Percent_Identity=34.0909090909091, Blast_Score=97, Evalue=1e-21, Organism=Escherichia coli, GI1787089, Length=202, Percent_Identity=36.1386138613861, Blast_Score=95, Evalue=4e-21, Organism=Escherichia coli, GI1786703, Length=209, Percent_Identity=34.4497607655502, Blast_Score=95, Evalue=4e-21, Organism=Escherichia coli, GI1788225, Length=187, Percent_Identity=35.8288770053476, Blast_Score=95, Evalue=6e-21, Organism=Escherichia coli, GI145693107, Length=207, Percent_Identity=35.2657004830918, Blast_Score=89, Evalue=3e-19, Organism=Escherichia coli, GI1790544, Length=242, Percent_Identity=31.404958677686, Blast_Score=88, Evalue=5e-19, Organism=Escherichia coli, GI1787500, Length=208, Percent_Identity=28.8461538461538, Blast_Score=80, Evalue=1e-16, Organism=Escherichia coli, GI1789962, Length=228, Percent_Identity=29.3859649122807, Blast_Score=80, Evalue=1e-16, Organism=Escherichia coli, GI48995001, Length=233, Percent_Identity=30.9012875536481, Blast_Score=79, Evalue=2e-16, Organism=Escherichia coli, GI1789873, Length=203, Percent_Identity=32.512315270936, Blast_Score=79, Evalue=4e-16, Organism=Escherichia coli, GI1788644, Length=211, Percent_Identity=31.7535545023697, Blast_Score=78, Evalue=6e-16, Organism=Escherichia coli, GI1789891, Length=218, Percent_Identity=30.7339449541284, Blast_Score=77, Evalue=9e-16, Organism=Escherichia coli, GI87081791, Length=200, Percent_Identity=32, Blast_Score=77, Evalue=2e-15, Organism=Escherichia coli, GI1789991, Length=219, Percent_Identity=29.2237442922374, Blast_Score=75, Evalue=4e-15, Organism=Escherichia coli, GI1786563, Length=222, Percent_Identity=32.4324324324324, Blast_Score=74, Evalue=1e-14, Organism=Escherichia coli, GI1786253, Length=199, Percent_Identity=32.1608040201005, Blast_Score=73, Evalue=2e-14, Organism=Escherichia coli, GI48994883, Length=198, Percent_Identity=30.3030303030303, Blast_Score=73, Evalue=2e-14, Organism=Escherichia coli, GI1789864, Length=217, Percent_Identity=28.110599078341, Blast_Score=73, Evalue=2e-14, Organism=Escherichia coli, GI1786872, Length=184, Percent_Identity=29.3478260869565, Blast_Score=73, Evalue=2e-14, Organism=Escherichia coli, GI1790739, Length=201, Percent_Identity=31.8407960199005, Blast_Score=72, Evalue=3e-14, Organism=Escherichia coli, GI1788761, Length=203, Percent_Identity=31.0344827586207, Blast_Score=72, Evalue=3e-14, Organism=Escherichia coli, GI1790162, Length=190, Percent_Identity=28.4210526315789, Blast_Score=71, Evalue=8e-14, Organism=Escherichia coli, GI1788450, Length=190, Percent_Identity=32.1052631578947, Blast_Score=70, Evalue=1e-13, Organism=Escherichia coli, GI1787758, Length=221, Percent_Identity=27.1493212669683, Blast_Score=70, Evalue=2e-13, Organism=Escherichia coli, GI1788210, Length=212, Percent_Identity=28.3018867924528, Blast_Score=69, Evalue=2e-13, Organism=Escherichia coli, GI1786319, Length=193, Percent_Identity=29.5336787564767, Blast_Score=69, Evalue=2e-13, Organism=Escherichia coli, GI1787712, Length=197, Percent_Identity=31.9796954314721, Blast_Score=69, Evalue=2e-13, Organism=Escherichia coli, GI48994997, Length=208, Percent_Identity=30.2884615384615, Blast_Score=69, Evalue=2e-13, Organism=Escherichia coli, GI1786803, Length=226, Percent_Identity=30.0884955752212, Blast_Score=67, Evalue=1e-12, Organism=Escherichia coli, GI87081709, Length=178, Percent_Identity=31.4606741573034, Blast_Score=66, Evalue=2e-12, Organism=Escherichia coli, GI1790467, Length=202, Percent_Identity=30.1980198019802, Blast_Score=66, Evalue=2e-12, Organism=Escherichia coli, GI1790190, Length=193, Percent_Identity=26.9430051813472, Blast_Score=66, Evalue=3e-12, Organism=Escherichia coli, GI1787143, Length=212, Percent_Identity=28.7735849056604, Blast_Score=65, Evalue=5e-12, Organism=Escherichia coli, GI1787112, Length=200, Percent_Identity=29, Blast_Score=64, Evalue=8e-12, Organism=Escherichia coli, GI1787370, Length=209, Percent_Identity=28.7081339712919, Blast_Score=64, Evalue=1e-11, Organism=Escherichia coli, GI1787972, Length=198, Percent_Identity=28.7878787878788, Blast_Score=62, Evalue=5e-11, Organism=Escherichia coli, GI1787759, Length=229, Percent_Identity=29.2576419213974, Blast_Score=61, Evalue=6e-11, Organism=Escherichia coli, GI1787792, Length=209, Percent_Identity=26.7942583732057, Blast_Score=61, Evalue=6e-11, Organism=Escherichia coli, GI1789593, Length=198, Percent_Identity=30.3030303030303, Blast_Score=61, Evalue=8e-11, Organism=Caenorhabditis elegans, GI17558664, Length=194, Percent_Identity=32.4742268041237, Blast_Score=73, Evalue=2e-13, Organism=Caenorhabditis elegans, GI115533592, Length=219, Percent_Identity=32.4200913242009, Blast_Score=70, Evalue=1e-12, Organism=Caenorhabditis elegans, GI17569145, Length=202, Percent_Identity=29.2079207920792, Blast_Score=65, Evalue=3e-11, Organism=Caenorhabditis elegans, GI17569143, Length=198, Percent_Identity=27.7777777777778, Blast_Score=65, Evalue=3e-11, Organism=Saccharomyces cerevisiae, GI6324498, Length=199, Percent_Identity=28.643216080402, Blast_Score=65, Evalue=1e-11, Organism=Drosophila melanogaster, GI19920532, Length=205, Percent_Identity=29.7560975609756, Blast_Score=75, Evalue=6e-14, Organism=Drosophila melanogaster, GI24580930, Length=205, Percent_Identity=29.7560975609756, Blast_Score=75, Evalue=6e-14, Organism=Drosophila melanogaster, GI85725262, Length=186, Percent_Identity=29.0322580645161, Blast_Score=72, Evalue=4e-13, Organism=Drosophila melanogaster, GI21357907, Length=189, Percent_Identity=34.9206349206349, Blast_Score=70, Evalue=1e-12,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003439 - InterPro: IPR017871 - InterPro: IPR003593 - InterPro: IPR012701 [H]
Pfam domain/function: PF00005 ABC_tran [H]
EC number: NA
Molecular weight: Translated: 28346; Mature: 28346
Theoretical pI: Translated: 8.37; Mature: 8.37
Prosite motif: PS00211 ABC_TRANSPORTER_1 ; PS50893 ABC_TRANSPORTER_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 3.0 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 3.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MQTIESSRRACDHDHARAFAGNAALMLRAVGVGKTFTLHAHGGMTIDALENVSLDVEAGE CCCHHHHHHHCCCHHHHHHCCCCEEEEEEECCCCEEEEEECCCEEEEHHCCCEEEECCCC CVALTGPSGAGKSTLLRCLYGNYLANRGTIAVRAGARAAEHVVLTASEPHEVIALRRDVI EEEEECCCCCCHHHHHHHHHHHHHCCCCCEEEECCCCCCCEEEEECCCCHHHHHHHHHHH GYVSQFLRAIPRVPALALVAAPLVARGMPEGDAADRAAHLLARLNVPRRLWTLAPATFSG HHHHHHHHHHCCCCHHHHHHHHHHHCCCCCCCHHHHHHHHHHHCCCCHHHHEECCCCCCC GEQQRVNIARGLIAEHPVLLLDEPTASLDAENRDVVAELIGDVRRRGAAIVGIFHDEATR CCHHHHHHHHHHHHHCCEEEEECCCCCCCCCCHHHHHHHHHHHHHCCCEEEEEECCHHHH ERVATRCFPLRPPSRARLPFDEVNA HHHHHHHCCCCCCCCCCCCHHHCCC >Mature Secondary Structure MQTIESSRRACDHDHARAFAGNAALMLRAVGVGKTFTLHAHGGMTIDALENVSLDVEAGE CCCHHHHHHHCCCHHHHHHCCCCEEEEEEECCCCEEEEEECCCEEEEHHCCCEEEECCCC CVALTGPSGAGKSTLLRCLYGNYLANRGTIAVRAGARAAEHVVLTASEPHEVIALRRDVI EEEEECCCCCCHHHHHHHHHHHHHCCCCCEEEECCCCCCCEEEEECCCCHHHHHHHHHHH GYVSQFLRAIPRVPALALVAAPLVARGMPEGDAADRAAHLLARLNVPRRLWTLAPATFSG HHHHHHHHHHCCCCHHHHHHHHHHHCCCCCCCHHHHHHHHHHHCCCCHHHHEECCCCCCC GEQQRVNIARGLIAEHPVLLLDEPTASLDAENRDVVAELIGDVRRRGAAIVGIFHDEATR CCHHHHHHHHHHHHHCCEEEEECCCCCCCCCCHHHHHHHHHHHHHCCCEEEEEECCHHHH ERVATRCFPLRPPSRARLPFDEVNA HHHHHHHCCCCCCCCCCCCHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 2155230; 1840580; 7610040; 9278503 [H]