| Definition | Burkholderia pseudomallei K96243 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_006350 |
| Length | 4,074,542 |
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The map label for this gene is wcbE
Identifier: 53720412
GI number: 53720412
Start: 3350703
End: 3352226
Strand: Reverse
Name: wcbE
Synonym: BPSL2803
Alternate gene names: NA
Gene position: 3352226-3350703 (Counterclockwise)
Preceding gene: 53720413
Following gene: 53720411
Centisome position: 82.27
GC content: 54.59
Gene sequence:
>1524_bases ATGAAGAATAAAGTGCGTGTATTGGTTGAACTTCGACCGGCGCTGGACGGGTATTCTGGCATTCCGCAGGAAACACGCTT GTTGTTTCGTACGCTGCTGGGCCTCAAAAAGATGGCGGTTACTGGTTTGCTCCAGCAGGGCGGTCGCGACATTACGGCGA AGATGGTGTATGCCGCGGAGTCGGAACGTCCCGCCGCTCAGATTCGCGCGATGTCCAAAATTGTTGTGTCGTTTACCGAT GACGGCCGCCGGGGAGTCGCCGGAGCAATTTCGCGTGCAATTAGTATCGTAATGCGAGGCATTTCGCTGCGGGCATCCGT GATCGCCGGTCTTTCCGAAAAGCTTGGGTTTTTCGCCCCGGTAGAATTTGAAGATTTCGTTTGGCGACGTTTCTTCGCGA AAACGCTCCCGGTCGACGACCGCCCCCACGTTCTGGCTGCGCAGTACCGTGTATTGCCGCTTGCGATGGCGACGTTGCAT CGTCTCAAGATCTCGCTGTCGGGGCTGTTGCGGGTCAAACGGTTCAAGAAAATCGAAACCCGAGATTTCGACGTATTTAT TTCGCAGACGCCGTTTCCCGGCGTCTTGTCGAGCAATACCAAGCTCATTGTTCGGTATCATGATGCGATACCGATTTTTC TTCCGCATACGATCAAGGATCGAGCTTTCCATCATGGCGCGCACTATGATGCGCTTGCCCGCAACGTTCGTTCGGGGGCG TACTTCGCTTGTGTCTCGGCTGCCACTAGAAATGATCTCCTGAAGATATTCCCTGAAATCGAGGATCGCGCGGTTGTCAT TCATAATACAGTCTCGCCGATCTATAGTGAAATTGATTCTCCTAAAGAATTAGTCAAGGATATTGTATCTTCCAGGCTGT TTCGGCCGCTTGCGAAGAAATACAAGGCGCTCAGTAGTAGCCATGTCGACGTCTTTACGCGAAGCCGATTGAATGCCGAT CAGCAGGATTTCGAGTACTTGCTCATGGTGTCGACGGTTGAGCCGAGAAAGAATCATACGTCGCTCGTGGCTGCGTGGGA ACTGCTCCGGTCTCGCCACAATGAGGCGTTGAAGCTCGTGCTCGTCGGGGATCTGGGGTGGGACTATGCCGAATTCGTCG ACGCAATAGTGCCGTGGGTCGAGAGGGGGGAATTGTTCCTGCTGAGCAATGTCGCGGCCCCGGATTTGCGCGATCTCTAC AAGCACGCGAAGGTGACGATTTGTCCGAGCTACGCGGAAGGTTTTGATTACTCCGGCGTGGAAGCGATGATGAGCGGTGG TGTCGTTGCTGCATCCGACATCCCGGTGCATCGGGAGGTCTACGAGGACGCCTGTATCTACTTCAACCCTTACTCCGTCG AATCAATTGTCGGTGGAATACGCGAGGCGATCTCGTTGCGCAACGCTTCCGAAACATTCGCCGAGTATCGTCGGTGCGCG AAGCGAATTTCGGCGCGCTACACGGCGGAGGCCATTTCGCCCCGGTGGGATGAGTTTATACAAAGCGTTGGTTCGGCCCC TTGA
Upstream 100 bases:
>100_bases GGAAGTTGTATGAATTTCCGGAAATGGACGAGGCGTATCATTTTTATCGGGAAATGCAGCGCGTATAAGGCGGCAGATCT GCTGGCCAAGAAGGGTCGCA
Downstream 100 bases:
>100_bases GGTTCGAAGAGGTAAACAGCACATGCGTGAGCGCACAGTTGACTATTCGTTTTGCGGCATGGTGCGCAGTCGGGAGCGGC TGGCGCGCCAAATTGTGTTC
Product: putative glycosyltransferase
Products: NA
Alternate protein names: Group 1 Glycosyl Transferase; Glycosyl Transferase; Mannosyltransferase; Mannosyltransferase B; Glycosyl Transferase Group 1 Protein; Glycosyltransferase WbpX; Mannosyltransferase A; Mannosyl Transferase B; Glycosyl Transferase Protein; Glycosyl Transferase Group 1 Family Protein; Bifunctional Glycosyltransferase
Number of amino acids: Translated: 507; Mature: 507
Protein sequence:
>507_residues MKNKVRVLVELRPALDGYSGIPQETRLLFRTLLGLKKMAVTGLLQQGGRDITAKMVYAAESERPAAQIRAMSKIVVSFTD DGRRGVAGAISRAISIVMRGISLRASVIAGLSEKLGFFAPVEFEDFVWRRFFAKTLPVDDRPHVLAAQYRVLPLAMATLH RLKISLSGLLRVKRFKKIETRDFDVFISQTPFPGVLSSNTKLIVRYHDAIPIFLPHTIKDRAFHHGAHYDALARNVRSGA YFACVSAATRNDLLKIFPEIEDRAVVIHNTVSPIYSEIDSPKELVKDIVSSRLFRPLAKKYKALSSSHVDVFTRSRLNAD QQDFEYLLMVSTVEPRKNHTSLVAAWELLRSRHNEALKLVLVGDLGWDYAEFVDAIVPWVERGELFLLSNVAAPDLRDLY KHAKVTICPSYAEGFDYSGVEAMMSGGVVAASDIPVHREVYEDACIYFNPYSVESIVGGIREAISLRNASETFAEYRRCA KRISARYTAEAISPRWDEFIQSVGSAP
Sequences:
>Translated_507_residues MKNKVRVLVELRPALDGYSGIPQETRLLFRTLLGLKKMAVTGLLQQGGRDITAKMVYAAESERPAAQIRAMSKIVVSFTD DGRRGVAGAISRAISIVMRGISLRASVIAGLSEKLGFFAPVEFEDFVWRRFFAKTLPVDDRPHVLAAQYRVLPLAMATLH RLKISLSGLLRVKRFKKIETRDFDVFISQTPFPGVLSSNTKLIVRYHDAIPIFLPHTIKDRAFHHGAHYDALARNVRSGA YFACVSAATRNDLLKIFPEIEDRAVVIHNTVSPIYSEIDSPKELVKDIVSSRLFRPLAKKYKALSSSHVDVFTRSRLNAD QQDFEYLLMVSTVEPRKNHTSLVAAWELLRSRHNEALKLVLVGDLGWDYAEFVDAIVPWVERGELFLLSNVAAPDLRDLY KHAKVTICPSYAEGFDYSGVEAMMSGGVVAASDIPVHREVYEDACIYFNPYSVESIVGGIREAISLRNASETFAEYRRCA KRISARYTAEAISPRWDEFIQSVGSAP >Mature_507_residues MKNKVRVLVELRPALDGYSGIPQETRLLFRTLLGLKKMAVTGLLQQGGRDITAKMVYAAESERPAAQIRAMSKIVVSFTD DGRRGVAGAISRAISIVMRGISLRASVIAGLSEKLGFFAPVEFEDFVWRRFFAKTLPVDDRPHVLAAQYRVLPLAMATLH RLKISLSGLLRVKRFKKIETRDFDVFISQTPFPGVLSSNTKLIVRYHDAIPIFLPHTIKDRAFHHGAHYDALARNVRSGA YFACVSAATRNDLLKIFPEIEDRAVVIHNTVSPIYSEIDSPKELVKDIVSSRLFRPLAKKYKALSSSHVDVFTRSRLNAD QQDFEYLLMVSTVEPRKNHTSLVAAWELLRSRHNEALKLVLVGDLGWDYAEFVDAIVPWVERGELFLLSNVAAPDLRDLY KHAKVTICPSYAEGFDYSGVEAMMSGGVVAASDIPVHREVYEDACIYFNPYSVESIVGGIREAISLRNASETFAEYRRCA KRISARYTAEAISPRWDEFIQSVGSAP
Specific function: Unknown
COG id: COG0438
COG function: function code M; Glycosyltransferase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 56826; Mature: 56826
Theoretical pI: Translated: 9.64; Mature: 9.64
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 2.6 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 2.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKNKVRVLVELRPALDGYSGIPQETRLLFRTLLGLKKMAVTGLLQQGGRDITAKMVYAAE CCCCEEEEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEEECC SERPAAQIRAMSKIVVSFTDDGRRGVAGAISRAISIVMRGISLRASVIAGLSEKLGFFAP CCCHHHHHHHHHHHEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC VEFEDFVWRRFFAKTLPVDDRPHVLAAQYRVLPLAMATLHRLKISLSGLLRVKRFKKIET CCHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC RDFDVFISQTPFPGVLSSNTKLIVRYHDAIPIFLPHTIKDRAFHHGAHYDALARNVRSGA CCEEEEEECCCCCCCCCCCCEEEEEEECCCCEEECCCHHHHHHHCCCHHHHHHHHHCCCC YFACVSAATRNDLLKIFPEIEDRAVVIHNTVSPIYSEIDSPKELVKDIVSSRLFRPLAKK EEEEEHHHHHHHHHHHCCCCCCCEEEEECCHHHHHHHCCCHHHHHHHHHHHHHHHHHHHH YKALSSSHVDVFTRSRLNADQQDFEYLLMVSTVEPRKNHTSLVAAWELLRSRHNEALKLV HHHHCCCCCHHHHHHHCCCCHHCCEEEEEEEECCCCCCHHHHHHHHHHHHHCCCCEEEEE LVGDLGWDYAEFVDAIVPWVERGELFLLSNVAAPDLRDLYKHAKVTICPSYAEGFDYSGV EEECCCCCHHHHHHHHHHHHHCCCEEEEECCCCCHHHHHHHHCEEEEECCHHCCCCCCCH EAMMSGGVVAASDIPVHREVYEDACIYFNPYSVESIVGGIREAISLRNASETFAEYRRCA HHHHCCCEEEECCCCCHHHHHHCCEEEECCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHH KRISARYTAEAISPRWDEFIQSVGSAP HHHHHHHHHHHCCCHHHHHHHHHCCCC >Mature Secondary Structure MKNKVRVLVELRPALDGYSGIPQETRLLFRTLLGLKKMAVTGLLQQGGRDITAKMVYAAE CCCCEEEEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEEECC SERPAAQIRAMSKIVVSFTDDGRRGVAGAISRAISIVMRGISLRASVIAGLSEKLGFFAP CCCHHHHHHHHHHHEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC VEFEDFVWRRFFAKTLPVDDRPHVLAAQYRVLPLAMATLHRLKISLSGLLRVKRFKKIET CCHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC RDFDVFISQTPFPGVLSSNTKLIVRYHDAIPIFLPHTIKDRAFHHGAHYDALARNVRSGA CCEEEEEECCCCCCCCCCCCEEEEEEECCCCEEECCCHHHHHHHCCCHHHHHHHHHCCCC YFACVSAATRNDLLKIFPEIEDRAVVIHNTVSPIYSEIDSPKELVKDIVSSRLFRPLAKK EEEEEHHHHHHHHHHHCCCCCCCEEEEECCHHHHHHHCCCHHHHHHHHHHHHHHHHHHHH YKALSSSHVDVFTRSRLNADQQDFEYLLMVSTVEPRKNHTSLVAAWELLRSRHNEALKLV HHHHCCCCCHHHHHHHCCCCHHCCEEEEEEEECCCCCCHHHHHHHHHHHHHCCCCEEEEE LVGDLGWDYAEFVDAIVPWVERGELFLLSNVAAPDLRDLYKHAKVTICPSYAEGFDYSGV EEECCCCCHHHHHHHHHHHHHCCCEEEEECCCCCHHHHHHHHCEEEEECCHHCCCCCCCH EAMMSGGVVAASDIPVHREVYEDACIYFNPYSVESIVGGIREAISLRNASETFAEYRRCA HHHHCCCEEEECCCCCHHHHHHCCEEEECCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHH KRISARYTAEAISPRWDEFIQSVGSAP HHHHHHHHHHHCCCHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA