| Definition | Burkholderia pseudomallei K96243 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_006350 |
| Length | 4,074,542 |
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The map label for this gene is 53720348
Identifier: 53720348
GI number: 53720348
Start: 3279418
End: 3280725
Strand: Reverse
Name: 53720348
Synonym: BPSL2738
Alternate gene names: NA
Gene position: 3280725-3279418 (Counterclockwise)
Preceding gene: 53720349
Following gene: 53720342
Centisome position: 80.52
GC content: 70.34
Gene sequence:
>1308_bases ATGAGCGCTATTCCCGACACGCTGCGCGCGAGCCTCGATCCGTCCCGCAAGAGCTGGCTCGATACGGCGAACGCGGCCGC GTGCGACTTCCCGATCCAGAACCTGCCGTTCGGCATCTTCAGCGACGCGCGCGACGCGTCGCGCCGCGCGGGCGTCGCGC TTGGCGATCAGATCATCGATCTCGCCGCGCTCGCGCGCGCGGGGCTGCTGACGGTCGACGGCGGGGCGGCCGTGTTCGCG CGGCCGGCGCTCAACGATTTCATCTCGCTCGGCCGCGACGCATGGCGCAGCGTGCGCGCCCAGCTGAGCGCGCTTTTCGA GCGCGGCGAAGCGCGGCTGCGCGACGACGCGGCGTTGCGCGCGAAGGTGCTCGTCGCGCAGCGCGACGCGGCGCTTCATC TGCCCGTCGACATTCCCGGCTATACCGATTTCTATTCGTCGAAGGAGCACGCGACGAACGTCGGCTCGATGTTTCGCGAT CCGAAGAACGCGCTGCTGCCGAACTGGTCGGAGATGCCGATCGGCTACAACGGCCGCGCGTCGTCGGTCGTCGTGAGCGG CACGCCGGTGCGCCGGCCGAACGGCCAGCTGAAGCTGCCCGACAGCGAGCGCCCGGTGTTCGGCGCGTGCCGCAAGCTCG ACATCGAGCTCGAGACGGGCTTCATCGTCGGCCGCGGCAACGCGCTCGGCGAGCCGATCGCGTGCGAGGATGCGGAGTCG CACATCTTCGGGATGGTGCTGCTCAACGACTGGAGCGCGCGCGACATCCAGCAATGGGAATACGTGCCGCTCGGGCCGTT CAACGCGAAGACGTTCGCGACGTCGATCTCGCCGTGGATCGTCACGCTCGATGCGCTCGAGCCGTTTCGCACCGCGCAGC CGAGGCAGGAGCCGGAGCCGCTCGCGTATCTGCGCCACGGCGGCGCGCATGCGTTCGACATCGAGCTCGAAGTGCGGCTG AGGCCGGAGGGCGCCGCCGACGCGACGACGATCGCGCGCACGAACTTCAGGCACATGTACTGGACGATGGCGCAGCAGCT CGCGCACCACACGGTGTCGGGCTGCAACACGCGGGTCGGCGACCTGATGGGCTCGGGCACGATCAGCGGGCCGGCGAAGC AGGCGTTCGGCAGCCTGCTCGAGCTGACGTGGAACGGCAAGGAGCCCGTCTCGCTCGCGGGCGGCGGCACGCGCGCGTTC ATCGAGGACGGCGACGAGCTGACGCTGGCGGGCTGGTGCCAGGGCGACGGGTATCGCGTCGGCTTCGGCACGTGCGTCGG GGAGATTCTGCCGGCGCGGGGCCGGTGA
Upstream 100 bases:
>100_bases TGATCCGGCCGACGCGCTTCGCGCTCGACACCGCGCAACTGCAGGCGAACTACTTCGAATGCTGGCAAGGCCTCAAGAAA CACTTCAATCCGGAGCAACG
Downstream 100 bases:
>100_bases CGCGCTAGCGCGCGAAGCGGGCCGCGCGCCTGGCGCGGCTCGAGCGCGCGAACGGGACGCACGGTCATCGGATCGGGCGC TTGCGGCCGCGAGGTTGCAA
Product: putative hydrolase
Products: acetoacetate; fumarate
Alternate protein names: Fumarylacetoacetate Hydrolase; Hydroxylase; Fumarylacetoacetate Hydrolase Family Protein; Fumarylacetoacetase Hydrolase; 2-Hydroxyhepta-2 4-Diene-1 7-Dioate Isomerase; LOW QUALITY PROTEIN Fumarylacetoacetase
Number of amino acids: Translated: 435; Mature: 434
Protein sequence:
>435_residues MSAIPDTLRASLDPSRKSWLDTANAAACDFPIQNLPFGIFSDARDASRRAGVALGDQIIDLAALARAGLLTVDGGAAVFA RPALNDFISLGRDAWRSVRAQLSALFERGEARLRDDAALRAKVLVAQRDAALHLPVDIPGYTDFYSSKEHATNVGSMFRD PKNALLPNWSEMPIGYNGRASSVVVSGTPVRRPNGQLKLPDSERPVFGACRKLDIELETGFIVGRGNALGEPIACEDAES HIFGMVLLNDWSARDIQQWEYVPLGPFNAKTFATSISPWIVTLDALEPFRTAQPRQEPEPLAYLRHGGAHAFDIELEVRL RPEGAADATTIARTNFRHMYWTMAQQLAHHTVSGCNTRVGDLMGSGTISGPAKQAFGSLLELTWNGKEPVSLAGGGTRAF IEDGDELTLAGWCQGDGYRVGFGTCVGEILPARGR
Sequences:
>Translated_435_residues MSAIPDTLRASLDPSRKSWLDTANAAACDFPIQNLPFGIFSDARDASRRAGVALGDQIIDLAALARAGLLTVDGGAAVFA RPALNDFISLGRDAWRSVRAQLSALFERGEARLRDDAALRAKVLVAQRDAALHLPVDIPGYTDFYSSKEHATNVGSMFRD PKNALLPNWSEMPIGYNGRASSVVVSGTPVRRPNGQLKLPDSERPVFGACRKLDIELETGFIVGRGNALGEPIACEDAES HIFGMVLLNDWSARDIQQWEYVPLGPFNAKTFATSISPWIVTLDALEPFRTAQPRQEPEPLAYLRHGGAHAFDIELEVRL RPEGAADATTIARTNFRHMYWTMAQQLAHHTVSGCNTRVGDLMGSGTISGPAKQAFGSLLELTWNGKEPVSLAGGGTRAF IEDGDELTLAGWCQGDGYRVGFGTCVGEILPARGR >Mature_434_residues SAIPDTLRASLDPSRKSWLDTANAAACDFPIQNLPFGIFSDARDASRRAGVALGDQIIDLAALARAGLLTVDGGAAVFAR PALNDFISLGRDAWRSVRAQLSALFERGEARLRDDAALRAKVLVAQRDAALHLPVDIPGYTDFYSSKEHATNVGSMFRDP KNALLPNWSEMPIGYNGRASSVVVSGTPVRRPNGQLKLPDSERPVFGACRKLDIELETGFIVGRGNALGEPIACEDAESH IFGMVLLNDWSARDIQQWEYVPLGPFNAKTFATSISPWIVTLDALEPFRTAQPRQEPEPLAYLRHGGAHAFDIELEVRLR PEGAADATTIARTNFRHMYWTMAQQLAHHTVSGCNTRVGDLMGSGTISGPAKQAFGSLLELTWNGKEPVSLAGGGTRAFI EDGDELTLAGWCQGDGYRVGFGTCVGEILPARGR
Specific function: Unknown
COG id: COG0179
COG function: function code Q; 2-keto-4-pentenoate hydratase/2-oxohepta-3-ene-1,7-dioic acid hydratase (catechol pathway)
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Homo sapiens, GI4557587, Length=411, Percent_Identity=57.1776155717762, Blast_Score=509, Evalue=1e-144, Organism=Caenorhabditis elegans, GI17568863, Length=410, Percent_Identity=54.6341463414634, Blast_Score=461, Evalue=1e-130, Organism=Drosophila melanogaster, GI24657182, Length=407, Percent_Identity=51.8427518427518, Blast_Score=432, Evalue=1e-121,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: 3.7.1.2
Molecular weight: Translated: 47057; Mature: 46925
Theoretical pI: Translated: 5.90; Mature: 5.90
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 3.0 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 2.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSAIPDTLRASLDPSRKSWLDTANAAACDFPIQNLPFGIFSDARDASRRAGVALGDQIID CCCCCCHHHHCCCCCHHHHHCCCCCCCCCCCHHHCCCCCCCCCHHHHHHCCCHHHHHHHH LAALARAGLLTVDGGAAVFARPALNDFISLGRDAWRSVRAQLSALFERGEARLRDDAALR HHHHHHCCEEEECCCCEEEECHHHHHHHHHCHHHHHHHHHHHHHHHHHCCHHHCCCHHHH AKVLVAQRDAALHLPVDIPGYTDFYSSKEHATNVGSMFRDPKNALLPNWSEMPIGYNGRA EEEEEEECCCEEEEEEECCCCCHHCCCHHHHHHHHHHHCCCCHHCCCCCCCCCCCCCCCC SSVVVSGTPVRRPNGQLKLPDSERPVFGACRKLDIELETGFIVGRGNALGEPIACEDAES CEEEEECCCCCCCCCCEECCCCCCCHHHHCEEEEEEEECCEEEECCCCCCCCCCCCCCCC HIFGMVLLNDWSARDIQQWEYVPLGPFNAKTFATSISPWIVTLDALEPFRTAQPRQEPEP CEEEEEEECCCCCCCCCCCCEEECCCCCCHHHEECCCCEEEEEECCCCHHCCCCCCCCCH LAYLRHGGAHAFDIELEVRLRPEGAADATTIARTNFRHMYWTMAQQLAHHTVSGCNTRVG HHHHHCCCCEEEEEEEEEEECCCCCCCCHHHHHCCHHHHHHHHHHHHHHHHHHCCCCHHH DLMGSGTISGPAKQAFGSLLELTWNGKEPVSLAGGGTRAFIEDGDELTLAGWCQGDGYRV HHHCCCCCCCHHHHHHHHHEEEEECCCCCEEECCCCEEEEEECCCEEEEEEEECCCCEEE GFGTCVGEILPARGR EHHHHHHHHCCCCCC >Mature Secondary Structure SAIPDTLRASLDPSRKSWLDTANAAACDFPIQNLPFGIFSDARDASRRAGVALGDQIID CCCCCHHHHCCCCCHHHHHCCCCCCCCCCCHHHCCCCCCCCCHHHHHHCCCHHHHHHHH LAALARAGLLTVDGGAAVFARPALNDFISLGRDAWRSVRAQLSALFERGEARLRDDAALR HHHHHHCCEEEECCCCEEEECHHHHHHHHHCHHHHHHHHHHHHHHHHHCCHHHCCCHHHH AKVLVAQRDAALHLPVDIPGYTDFYSSKEHATNVGSMFRDPKNALLPNWSEMPIGYNGRA EEEEEEECCCEEEEEEECCCCCHHCCCHHHHHHHHHHHCCCCHHCCCCCCCCCCCCCCCC SSVVVSGTPVRRPNGQLKLPDSERPVFGACRKLDIELETGFIVGRGNALGEPIACEDAES CEEEEECCCCCCCCCCEECCCCCCCHHHHCEEEEEEEECCEEEECCCCCCCCCCCCCCCC HIFGMVLLNDWSARDIQQWEYVPLGPFNAKTFATSISPWIVTLDALEPFRTAQPRQEPEP CEEEEEEECCCCCCCCCCCCEEECCCCCCHHHEECCCCEEEEEECCCCHHCCCCCCCCCH LAYLRHGGAHAFDIELEVRLRPEGAADATTIARTNFRHMYWTMAQQLAHHTVSGCNTRVG HHHHHCCCCEEEEEEEEEEECCCCCCCCHHHHHCCHHHHHHHHHHHHHHHHHHCCCCHHH DLMGSGTISGPAKQAFGSLLELTWNGKEPVSLAGGGTRAFIEDGDELTLAGWCQGDGYRV HHHCCCCCCCHHHHHHHHHEEEEECCCCCEEECCCCEEEEEECCCEEEEEEEECCCCEEE GFGTCVGEILPARGR EHHHHHHHHCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: 4-fumarylacetoacetate; H2O
Specific reaction: 4-fumarylacetoacetate + H2O = acetoacetate + fumarate
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA