Definition Burkholderia pseudomallei K96243 chromosome chromosome 1, complete sequence.
Accession NC_006350
Length 4,074,542

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The map label for this gene is yadT [C]

Identifier: 53720332

GI number: 53720332

Start: 3256564

End: 3257607

Strand: Reverse

Name: yadT [C]

Synonym: BPSL2722

Alternate gene names: 53720332

Gene position: 3257607-3256564 (Counterclockwise)

Preceding gene: 53720333

Following gene: 53720331

Centisome position: 79.95

GC content: 72.22

Gene sequence:

>1044_bases
ATGTTGAAACGAACAGCCGCCGAGCGCGGCGCGCCGGCCTTGCGCGCCGCGTTCACGCTGCCGTTCGCGGCGGCCGCGAT
GGCGGCGGCCGCGATCGTCGCGACCGTCGCGACGGCGGCCGAGGCGAACGCGTACCCGGTGACGGTGCGCAGTTGCGGGC
GCGACGTCACGTTCGAGCGCGCGCCCGCGCGCGCGGTGAGCAACGACGTGAACCTCACCGAGATGATGATCGCGCTCGGC
CTGCAGACGCGGATGGCCGGCTACACCGGCATCGCCGGCTGGAAGACCGGCAATGCGCGGCTGCGTGCGGCGCTCGCGGG
CGTGCCCGAGCTCGCGACTCACTATCCGTCGCTCGAAGCGCTCGTCGATGCGCGCGCCGATTTCTACTTCGCCGGCTGGA
ATTACGGGATGCATCCGGGCGGACCGGTCACGCCCGCGTCGCTCGAACGATTCGGGATCCGAACGTACGAGCTGACCGAA
TCGTGCTCGCTCGTGATGCGGCGGCCGCCGGCCTCGCTCGACGACGTCTATCGCGATCTGGCCAATCTCGGCCGGATCTT
CGGCGTGGACGCGCGCGCGGCGCAGGTCGCGGGCGCGATGCGCGCGCGCATCGACGCGGTGCGCCGCACGCTCGCGAGCG
CGGCGGGCGGCGGGACGCCGCCGCGCGTGTTCGTCTACGACAGCGGCACCGACAAGCCGATGACGGCGGGCGCGCTCGCG
ATGCCCACCGCGCTGATCGCGGCGGCGGGCGGGCGCAACGTGATGGACGACGTGCCGCGCGGCTGGACGCAGGTGGGCTG
GGAGAGCGTCGTCGCGCGCGATCCGCAGGCGATCGTGATCGTCGACTATTCGGCGGTGACAGCCGAGCAGAAGAAACAGT
TCCTGCTGAGCCAGCCCGCGCTCGCGCAAGTCGAAGCGATTCGCGCGCGCCGCTTCATTGTGATTCCGTACGATGCGGCG
ACGCCCGGCGTCGAGAACGCGGCGGCCGTCGAGACGATCGCGCGCGGCCTGCATCCGCGCGCGTTCGCGAAGGCCGCGCG
ATGA

Upstream 100 bases:

>100_bases
CGCTCATCGCCGACGTGTTCGGCGTCGACGCGATCGTCGATGCGCACCCGGTGTCGGGGCGGCCGCGCGTCACGCTGATC
TATCCGGAGGATGCCGAACG

Downstream 100 bases:

>100_bases
GCGGCGCGGCACCCGCCGACGCACCGCCGGCATCGCGCGGCCGTCGATGGCGCGTGCGGCTCGTGCTGCCCGCGCTTGCG
GCGCTCGTCGCGATTTCGAT

Product: membrane transport solute-binding protein

Products: NA

Alternate protein names: Iron Transport Lipoprotein; Iron ABC Transporter; Transporter Subunit; Fe3+-Hydroxamate ABC Transporter Periplasmic Protein; Iron Compound ABC Transporter

Number of amino acids: Translated: 347; Mature: 347

Protein sequence:

>347_residues
MLKRTAAERGAPALRAAFTLPFAAAAMAAAAIVATVATAAEANAYPVTVRSCGRDVTFERAPARAVSNDVNLTEMMIALG
LQTRMAGYTGIAGWKTGNARLRAALAGVPELATHYPSLEALVDARADFYFAGWNYGMHPGGPVTPASLERFGIRTYELTE
SCSLVMRRPPASLDDVYRDLANLGRIFGVDARAAQVAGAMRARIDAVRRTLASAAGGGTPPRVFVYDSGTDKPMTAGALA
MPTALIAAAGGRNVMDDVPRGWTQVGWESVVARDPQAIVIVDYSAVTAEQKKQFLLSQPALAQVEAIRARRFIVIPYDAA
TPGVENAAAVETIARGLHPRAFAKAAR

Sequences:

>Translated_347_residues
MLKRTAAERGAPALRAAFTLPFAAAAMAAAAIVATVATAAEANAYPVTVRSCGRDVTFERAPARAVSNDVNLTEMMIALG
LQTRMAGYTGIAGWKTGNARLRAALAGVPELATHYPSLEALVDARADFYFAGWNYGMHPGGPVTPASLERFGIRTYELTE
SCSLVMRRPPASLDDVYRDLANLGRIFGVDARAAQVAGAMRARIDAVRRTLASAAGGGTPPRVFVYDSGTDKPMTAGALA
MPTALIAAAGGRNVMDDVPRGWTQVGWESVVARDPQAIVIVDYSAVTAEQKKQFLLSQPALAQVEAIRARRFIVIPYDAA
TPGVENAAAVETIARGLHPRAFAKAAR
>Mature_347_residues
MLKRTAAERGAPALRAAFTLPFAAAAMAAAAIVATVATAAEANAYPVTVRSCGRDVTFERAPARAVSNDVNLTEMMIALG
LQTRMAGYTGIAGWKTGNARLRAALAGVPELATHYPSLEALVDARADFYFAGWNYGMHPGGPVTPASLERFGIRTYELTE
SCSLVMRRPPASLDDVYRDLANLGRIFGVDARAAQVAGAMRARIDAVRRTLASAAGGGTPPRVFVYDSGTDKPMTAGALA
MPTALIAAAGGRNVMDDVPRGWTQVGWESVVARDPQAIVIVDYSAVTAEQKKQFLLSQPALAQVEAIRARRFIVIPYDAA
TPGVENAAAVETIARGLHPRAFAKAAR

Specific function: Unknown

COG id: COG0614

COG function: function code P; ABC-type Fe3+-hydroxamate transport system, periplasmic component

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 36629; Mature: 36629

Theoretical pI: Translated: 9.97; Mature: 9.97

Prosite motif: PS50983 FE_B12_PBP

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
3.2 %Met     (Translated Protein)
3.7 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
3.2 %Met     (Mature Protein)
3.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLKRTAAERGAPALRAAFTLPFAAAAMAAAAIVATVATAAEANAYPVTVRSCGRDVTFER
CCCCCCHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEHHHCCCCCCCCC
APARAVSNDVNLTEMMIALGLQTRMAGYTGIAGWKTGNARLRAALAGVPELATHYPSLEA
CCHHHHHCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHCCHHHHHHCCCHHH
LVDARADFYFAGWNYGMHPGGPVTPASLERFGIRTYELTESCSLVMRRPPASLDDVYRDL
HHHCCCCEEEECCCCCCCCCCCCCHHHHHHHCCEEEEHHHHHHHHHCCCCCCHHHHHHHH
ANLGRIFGVDARAAQVAGAMRARIDAVRRTLASAAGGGTPPRVFVYDSGTDKPMTAGALA
HHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEECCCCCCCCCCHHH
MPTALIAAAGGRNVMDDVPRGWTQVGWESVVARDPQAIVIVDYSAVTAEQKKQFLLSQPA
HHHHHHHHCCCCCHHHHCCCCHHHHHHHHHHCCCCCEEEEEECHHHHHHHHHHHHHCCCH
LAQVEAIRARRFIVIPYDAATPGVENAAAVETIARGLHPRAFAKAAR
HHHHHHHHHCEEEEEEECCCCCCCCHHHHHHHHHHCCCHHHHHHCCC
>Mature Secondary Structure
MLKRTAAERGAPALRAAFTLPFAAAAMAAAAIVATVATAAEANAYPVTVRSCGRDVTFER
CCCCCCHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEHHHCCCCCCCCC
APARAVSNDVNLTEMMIALGLQTRMAGYTGIAGWKTGNARLRAALAGVPELATHYPSLEA
CCHHHHHCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHCCHHHHHHCCCHHH
LVDARADFYFAGWNYGMHPGGPVTPASLERFGIRTYELTESCSLVMRRPPASLDDVYRDL
HHHCCCCEEEECCCCCCCCCCCCCHHHHHHHCCEEEEHHHHHHHHHCCCCCCHHHHHHHH
ANLGRIFGVDARAAQVAGAMRARIDAVRRTLASAAGGGTPPRVFVYDSGTDKPMTAGALA
HHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEECCCCCCCCCCHHH
MPTALIAAAGGRNVMDDVPRGWTQVGWESVVARDPQAIVIVDYSAVTAEQKKQFLLSQPA
HHHHHHHHCCCCCHHHHCCCCHHHHHHHHHHCCCCCEEEEEECHHHHHHHHHHHHHCCCH
LAQVEAIRARRFIVIPYDAATPGVENAAAVETIARGLHPRAFAKAAR
HHHHHHHHHCEEEEEEECCCCCCCCHHHHHHHHHHCCCHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA