| Definition | Burkholderia pseudomallei K96243 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_006350 |
| Length | 4,074,542 |
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The map label for this gene is yadT [C]
Identifier: 53720332
GI number: 53720332
Start: 3256564
End: 3257607
Strand: Reverse
Name: yadT [C]
Synonym: BPSL2722
Alternate gene names: 53720332
Gene position: 3257607-3256564 (Counterclockwise)
Preceding gene: 53720333
Following gene: 53720331
Centisome position: 79.95
GC content: 72.22
Gene sequence:
>1044_bases ATGTTGAAACGAACAGCCGCCGAGCGCGGCGCGCCGGCCTTGCGCGCCGCGTTCACGCTGCCGTTCGCGGCGGCCGCGAT GGCGGCGGCCGCGATCGTCGCGACCGTCGCGACGGCGGCCGAGGCGAACGCGTACCCGGTGACGGTGCGCAGTTGCGGGC GCGACGTCACGTTCGAGCGCGCGCCCGCGCGCGCGGTGAGCAACGACGTGAACCTCACCGAGATGATGATCGCGCTCGGC CTGCAGACGCGGATGGCCGGCTACACCGGCATCGCCGGCTGGAAGACCGGCAATGCGCGGCTGCGTGCGGCGCTCGCGGG CGTGCCCGAGCTCGCGACTCACTATCCGTCGCTCGAAGCGCTCGTCGATGCGCGCGCCGATTTCTACTTCGCCGGCTGGA ATTACGGGATGCATCCGGGCGGACCGGTCACGCCCGCGTCGCTCGAACGATTCGGGATCCGAACGTACGAGCTGACCGAA TCGTGCTCGCTCGTGATGCGGCGGCCGCCGGCCTCGCTCGACGACGTCTATCGCGATCTGGCCAATCTCGGCCGGATCTT CGGCGTGGACGCGCGCGCGGCGCAGGTCGCGGGCGCGATGCGCGCGCGCATCGACGCGGTGCGCCGCACGCTCGCGAGCG CGGCGGGCGGCGGGACGCCGCCGCGCGTGTTCGTCTACGACAGCGGCACCGACAAGCCGATGACGGCGGGCGCGCTCGCG ATGCCCACCGCGCTGATCGCGGCGGCGGGCGGGCGCAACGTGATGGACGACGTGCCGCGCGGCTGGACGCAGGTGGGCTG GGAGAGCGTCGTCGCGCGCGATCCGCAGGCGATCGTGATCGTCGACTATTCGGCGGTGACAGCCGAGCAGAAGAAACAGT TCCTGCTGAGCCAGCCCGCGCTCGCGCAAGTCGAAGCGATTCGCGCGCGCCGCTTCATTGTGATTCCGTACGATGCGGCG ACGCCCGGCGTCGAGAACGCGGCGGCCGTCGAGACGATCGCGCGCGGCCTGCATCCGCGCGCGTTCGCGAAGGCCGCGCG ATGA
Upstream 100 bases:
>100_bases CGCTCATCGCCGACGTGTTCGGCGTCGACGCGATCGTCGATGCGCACCCGGTGTCGGGGCGGCCGCGCGTCACGCTGATC TATCCGGAGGATGCCGAACG
Downstream 100 bases:
>100_bases GCGGCGCGGCACCCGCCGACGCACCGCCGGCATCGCGCGGCCGTCGATGGCGCGTGCGGCTCGTGCTGCCCGCGCTTGCG GCGCTCGTCGCGATTTCGAT
Product: membrane transport solute-binding protein
Products: NA
Alternate protein names: Iron Transport Lipoprotein; Iron ABC Transporter; Transporter Subunit; Fe3+-Hydroxamate ABC Transporter Periplasmic Protein; Iron Compound ABC Transporter
Number of amino acids: Translated: 347; Mature: 347
Protein sequence:
>347_residues MLKRTAAERGAPALRAAFTLPFAAAAMAAAAIVATVATAAEANAYPVTVRSCGRDVTFERAPARAVSNDVNLTEMMIALG LQTRMAGYTGIAGWKTGNARLRAALAGVPELATHYPSLEALVDARADFYFAGWNYGMHPGGPVTPASLERFGIRTYELTE SCSLVMRRPPASLDDVYRDLANLGRIFGVDARAAQVAGAMRARIDAVRRTLASAAGGGTPPRVFVYDSGTDKPMTAGALA MPTALIAAAGGRNVMDDVPRGWTQVGWESVVARDPQAIVIVDYSAVTAEQKKQFLLSQPALAQVEAIRARRFIVIPYDAA TPGVENAAAVETIARGLHPRAFAKAAR
Sequences:
>Translated_347_residues MLKRTAAERGAPALRAAFTLPFAAAAMAAAAIVATVATAAEANAYPVTVRSCGRDVTFERAPARAVSNDVNLTEMMIALG LQTRMAGYTGIAGWKTGNARLRAALAGVPELATHYPSLEALVDARADFYFAGWNYGMHPGGPVTPASLERFGIRTYELTE SCSLVMRRPPASLDDVYRDLANLGRIFGVDARAAQVAGAMRARIDAVRRTLASAAGGGTPPRVFVYDSGTDKPMTAGALA MPTALIAAAGGRNVMDDVPRGWTQVGWESVVARDPQAIVIVDYSAVTAEQKKQFLLSQPALAQVEAIRARRFIVIPYDAA TPGVENAAAVETIARGLHPRAFAKAAR >Mature_347_residues MLKRTAAERGAPALRAAFTLPFAAAAMAAAAIVATVATAAEANAYPVTVRSCGRDVTFERAPARAVSNDVNLTEMMIALG LQTRMAGYTGIAGWKTGNARLRAALAGVPELATHYPSLEALVDARADFYFAGWNYGMHPGGPVTPASLERFGIRTYELTE SCSLVMRRPPASLDDVYRDLANLGRIFGVDARAAQVAGAMRARIDAVRRTLASAAGGGTPPRVFVYDSGTDKPMTAGALA MPTALIAAAGGRNVMDDVPRGWTQVGWESVVARDPQAIVIVDYSAVTAEQKKQFLLSQPALAQVEAIRARRFIVIPYDAA TPGVENAAAVETIARGLHPRAFAKAAR
Specific function: Unknown
COG id: COG0614
COG function: function code P; ABC-type Fe3+-hydroxamate transport system, periplasmic component
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 36629; Mature: 36629
Theoretical pI: Translated: 9.97; Mature: 9.97
Prosite motif: PS50983 FE_B12_PBP
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 3.2 %Met (Translated Protein) 3.7 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 3.2 %Met (Mature Protein) 3.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLKRTAAERGAPALRAAFTLPFAAAAMAAAAIVATVATAAEANAYPVTVRSCGRDVTFER CCCCCCHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEHHHCCCCCCCCC APARAVSNDVNLTEMMIALGLQTRMAGYTGIAGWKTGNARLRAALAGVPELATHYPSLEA CCHHHHHCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHCCHHHHHHCCCHHH LVDARADFYFAGWNYGMHPGGPVTPASLERFGIRTYELTESCSLVMRRPPASLDDVYRDL HHHCCCCEEEECCCCCCCCCCCCCHHHHHHHCCEEEEHHHHHHHHHCCCCCCHHHHHHHH ANLGRIFGVDARAAQVAGAMRARIDAVRRTLASAAGGGTPPRVFVYDSGTDKPMTAGALA HHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEECCCCCCCCCCHHH MPTALIAAAGGRNVMDDVPRGWTQVGWESVVARDPQAIVIVDYSAVTAEQKKQFLLSQPA HHHHHHHHCCCCCHHHHCCCCHHHHHHHHHHCCCCCEEEEEECHHHHHHHHHHHHHCCCH LAQVEAIRARRFIVIPYDAATPGVENAAAVETIARGLHPRAFAKAAR HHHHHHHHHCEEEEEEECCCCCCCCHHHHHHHHHHCCCHHHHHHCCC >Mature Secondary Structure MLKRTAAERGAPALRAAFTLPFAAAAMAAAAIVATVATAAEANAYPVTVRSCGRDVTFER CCCCCCHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEHHHCCCCCCCCC APARAVSNDVNLTEMMIALGLQTRMAGYTGIAGWKTGNARLRAALAGVPELATHYPSLEA CCHHHHHCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHCCHHHHHHCCCHHH LVDARADFYFAGWNYGMHPGGPVTPASLERFGIRTYELTESCSLVMRRPPASLDDVYRDL HHHCCCCEEEECCCCCCCCCCCCCHHHHHHHCCEEEEHHHHHHHHHCCCCCCHHHHHHHH ANLGRIFGVDARAAQVAGAMRARIDAVRRTLASAAGGGTPPRVFVYDSGTDKPMTAGALA HHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEECCCCCCCCCCHHH MPTALIAAAGGRNVMDDVPRGWTQVGWESVVARDPQAIVIVDYSAVTAEQKKQFLLSQPA HHHHHHHHCCCCCHHHHCCCCHHHHHHHHHHCCCCCEEEEEECHHHHHHHHHHHHHCCCH LAQVEAIRARRFIVIPYDAATPGVENAAAVETIARGLHPRAFAKAAR HHHHHHHHHCEEEEEEECCCCCCCCHHHHHHHHHHCCCHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA