| Definition | Burkholderia pseudomallei K96243 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_006350 |
| Length | 4,074,542 |
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The map label for this gene is 53720309
Identifier: 53720309
GI number: 53720309
Start: 3226050
End: 3228209
Strand: Reverse
Name: 53720309
Synonym: BPSL2699
Alternate gene names: NA
Gene position: 3228209-3226050 (Counterclockwise)
Preceding gene: 53720310
Following gene: 53720308
Centisome position: 79.23
GC content: 68.1
Gene sequence:
>2160_bases ATGAAACAAAACTTCAAGTTGACGAGCATTGCATTGTCCGCAGCGGTTGCGTTCGGAGTCGCGGCTGCGACGCCGGCCGT CGCAGCCGGATTGGATACGCTTCCGGTTTCCGCTTCGGTGACTGACCTCGGCGGCGCCGGGTCGGGGAGCGCCATGCTGG CGCTCGCCGGCGGGACGCAACATGGCTCGATCCATGCGAGCGCGCTCGGTTCGGCCGACGCATCGATCAGCAACGTCGCA CTCGACAACTTGACGGGTACGCTTGCGAACGCGGCGAGCACGCTGCAAAACGCGGCGGCGAACAACCCGCTGTCGGGTGT CGCGAGCAATGCAGTCGGTACGCTGACGAATCTGGCGAACAACAATCCGTTGCCCGGCGCACTGAGCAATGCGGTGGGCA CGCTGCAAAACGCGGCGACGAACAACCCGCTGTCGGGTGTCGCGAGCAACGCGGTCGGCACGCTGACGAATCTGGCGAAC AACAATCCGTTGCCGGGTGCGCTGAGCAATGCGGTGGGCACGCTGCAAAACGCGGCGGCGAACAACCCGCTGTCGGGCGT CGCGAGCAATGCAGTCGGCACGCTGACGAATCTGGCGAACAATAATCCGCTGCCGGGTGCACTGAGCAATGCGGTGAGCA CGCTGCAAAACGCGGCGGCGAACAACCCGCTGTCGGGTGTCGCGAACAACGCGGTCGGCACGCTGACGAATCTGGCGAAC AGCAATCCGCTGCCGGGTGCGCTGAGCAATGCGGCGAGCACGCTGCAGAACGCGGCGACGAACAACCCGCTGTCGGGCGT CGCGAGCAACGCGGTCGGCACGCTGACGAATCTGGCGAACAGCAATCCGCTGCCGGGTGCGCTGAGCAATGCGGTGAGCA CGCTGCAAAACGCGGCGGCGAACAATCCGCTGTCGGGTGTCGCGAGCAACGCGGTCGGCACGCTGACGAATCTGGCGAAC AACAATCCGCTGCCGGGTGCGCTGAGCAATGCGGTGAGCACGCTGCAAAACGCGGCGGCGAACAACCCGCTGTCGGGCGT CGCGAGCAATGCAGTCGGCACGCTGACGAATCTGGCGAACAATAATCCGCTGCCGGGTGCACTGAGCAATGCGGTGAGCA CGCTGCAAAACGCGGCGGCGAACAACCCGCTGTCGGGTGTCGCGAACAACGCGGTCGGCACGCTGACGAATCTGGCGAAC AACAATCCGCTGCCCGGCGCACTGAGCAATGCGGTGAGCACGCTGCAAAACGCGGCGACGAACAACCCGCTGTCGGGTGT CGCGAGCAATGCAGTCGGCACGCTGACGAATCTGGCGAACAATAATCCGCTGCCGGGTGCACTGAGCAACGTGGCTGGCG CATTGGCCGGCGCCGCGAGCAATGGCTCGGGAGCACTGACGGGCGCCGCCGGCAACGTGACGGGCGCGCTCGCCGGCGCG GGCAGCACCGCGGCCGGCGCGATCTCGGGGGCGATGAGCAACAACCCGTTGCCGGGCGTCGTGAACAACGTGGTCGGCAC GCTCGCGAACGCGATTGGCAGCAATCCGATCACGCCCATCACGAGCGTCGCGAGCGGTCTCGCGAACGCGCTTTCCGTTG CCAATCCCGCCGCGCTGACCGCGGCCGCAAACACCGTCGCGGGCACGCTCGCGCGCGCGGCGAACGGCACCCCGGTCGCG GGTGCGATCGGCGGCCTCGTGGCCGCGCTGCCCGTCGCTAATCCGGCCGGCGCGCTGACGAGCGCGGCAAACAACGCAGC AAGCACGATCGCGACGGTGGCGGGCACCAACCCGGCTGCCGCGATCGGCGGCGTCGCGGGCGCATTGACGGGGGCGGCCG GCACCGGCGTGGCGACGGCCTCGCAACTCGGAAGCGTCGGCTCGGCGCTGATGGGTTCGGGCGCGGCCTCGGCTGGCAAG GTTTTGACGTCGGGCAGCGCCGCATTCGGCAGCGCGGCCGCGTCGGCCGGCTCGCTGCTGACGACGGGAGCGGCCGCCGC GAGCTCGGTCGTCAATTCGCTGGGCTCGTCGGTCGGCGCAGTGGTGGCGTCGCTGCCGAACCTGAGCGTGTCGTCGTCGA AGTCGACGGCTGCGGCGTCGAATCCGCTGGCACCCGTCTCGTCGACGGTCGCGACGCTCGTCGGCGCGCTGCCGAAGTAA
Upstream 100 bases:
>100_bases AGAAAACGGTGCGCGATCGATCGGGTGCGCGTGCTGGCATGTTCCGTGCGGAGACCTCGGCGCCGTAACGACGGCGGTAC CCATCCACACGAGGTCACTT
Downstream 100 bases:
>100_bases TGGCGCGGCGCGTTTCGGTCGGATAGCGGAACGCGCCCCTGGTGGAGAGTAGTCAGCCGGAAGGCGAAGCGGGGCGGCAT GGCGGTGACGTCATGCCGCC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 719; Mature: 719
Protein sequence:
>719_residues MKQNFKLTSIALSAAVAFGVAAATPAVAAGLDTLPVSASVTDLGGAGSGSAMLALAGGTQHGSIHASALGSADASISNVA LDNLTGTLANAASTLQNAAANNPLSGVASNAVGTLTNLANNNPLPGALSNAVGTLQNAATNNPLSGVASNAVGTLTNLAN NNPLPGALSNAVGTLQNAAANNPLSGVASNAVGTLTNLANNNPLPGALSNAVSTLQNAAANNPLSGVANNAVGTLTNLAN SNPLPGALSNAASTLQNAATNNPLSGVASNAVGTLTNLANSNPLPGALSNAVSTLQNAAANNPLSGVASNAVGTLTNLAN NNPLPGALSNAVSTLQNAAANNPLSGVASNAVGTLTNLANNNPLPGALSNAVSTLQNAAANNPLSGVANNAVGTLTNLAN NNPLPGALSNAVSTLQNAATNNPLSGVASNAVGTLTNLANNNPLPGALSNVAGALAGAASNGSGALTGAAGNVTGALAGA GSTAAGAISGAMSNNPLPGVVNNVVGTLANAIGSNPITPITSVASGLANALSVANPAALTAAANTVAGTLARAANGTPVA GAIGGLVAALPVANPAGALTSAANNAASTIATVAGTNPAAAIGGVAGALTGAAGTGVATASQLGSVGSALMGSGAASAGK VLTSGSAAFGSAAASAGSLLTTGAAAASSVVNSLGSSVGAVVASLPNLSVSSSKSTAAASNPLAPVSSTVATLVGALPK
Sequences:
>Translated_719_residues MKQNFKLTSIALSAAVAFGVAAATPAVAAGLDTLPVSASVTDLGGAGSGSAMLALAGGTQHGSIHASALGSADASISNVA LDNLTGTLANAASTLQNAAANNPLSGVASNAVGTLTNLANNNPLPGALSNAVGTLQNAATNNPLSGVASNAVGTLTNLAN NNPLPGALSNAVGTLQNAAANNPLSGVASNAVGTLTNLANNNPLPGALSNAVSTLQNAAANNPLSGVANNAVGTLTNLAN SNPLPGALSNAASTLQNAATNNPLSGVASNAVGTLTNLANSNPLPGALSNAVSTLQNAAANNPLSGVASNAVGTLTNLAN NNPLPGALSNAVSTLQNAAANNPLSGVASNAVGTLTNLANNNPLPGALSNAVSTLQNAAANNPLSGVANNAVGTLTNLAN NNPLPGALSNAVSTLQNAATNNPLSGVASNAVGTLTNLANNNPLPGALSNVAGALAGAASNGSGALTGAAGNVTGALAGA GSTAAGAISGAMSNNPLPGVVNNVVGTLANAIGSNPITPITSVASGLANALSVANPAALTAAANTVAGTLARAANGTPVA GAIGGLVAALPVANPAGALTSAANNAASTIATVAGTNPAAAIGGVAGALTGAAGTGVATASQLGSVGSALMGSGAASAGK VLTSGSAAFGSAAASAGSLLTTGAAAASSVVNSLGSSVGAVVASLPNLSVSSSKSTAAASNPLAPVSSTVATLVGALPK >Mature_719_residues MKQNFKLTSIALSAAVAFGVAAATPAVAAGLDTLPVSASVTDLGGAGSGSAMLALAGGTQHGSIHASALGSADASISNVA LDNLTGTLANAASTLQNAAANNPLSGVASNAVGTLTNLANNNPLPGALSNAVGTLQNAATNNPLSGVASNAVGTLTNLAN NNPLPGALSNAVGTLQNAAANNPLSGVASNAVGTLTNLANNNPLPGALSNAVSTLQNAAANNPLSGVANNAVGTLTNLAN SNPLPGALSNAASTLQNAATNNPLSGVASNAVGTLTNLANSNPLPGALSNAVSTLQNAAANNPLSGVASNAVGTLTNLAN NNPLPGALSNAVSTLQNAAANNPLSGVASNAVGTLTNLANNNPLPGALSNAVSTLQNAAANNPLSGVANNAVGTLTNLAN NNPLPGALSNAVSTLQNAATNNPLSGVASNAVGTLTNLANNNPLPGALSNVAGALAGAASNGSGALTGAAGNVTGALAGA GSTAAGAISGAMSNNPLPGVVNNVVGTLANAIGSNPITPITSVASGLANALSVANPAALTAAANTVAGTLARAANGTPVA GAIGGLVAALPVANPAGALTSAANNAASTIATVAGTNPAAAIGGVAGALTGAAGTGVATASQLGSVGSALMGSGAASAGK VLTSGSAAFGSAAASAGSLLTTGAAAASSVVNSLGSSVGAVVASLPNLSVSSSKSTAAASNPLAPVSSTVATLVGALPK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 66249; Mature: 66249
Theoretical pI: Translated: 10.21; Mature: 10.21
Prosite motif: PS50176 ARM_REPEAT
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 0.6 %Met (Translated Protein) 0.6 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 0.6 %Met (Mature Protein) 0.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKQNFKLTSIALSAAVAFGVAAATPAVAAGLDTLPVSASVTDLGGAGSGSAMLALAGGTQ CCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCEEEEEECCCC HGSIHASALGSADASISNVALDNLTGTLANAASTLQNAAANNPLSGVASNAVGTLTNLAN CCCEEHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCC NNPLPGALSNAVGTLQNAATNNPLSGVASNAVGTLTNLANNNPLPGALSNAVGTLQNAAA CCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHC NNPLSGVASNAVGTLTNLANNNPLPGALSNAVSTLQNAAANNPLSGVANNAVGTLTNLAN CCCCHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCC SNPLPGALSNAASTLQNAATNNPLSGVASNAVGTLTNLANSNPLPGALSNAVSTLQNAAA CCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHC NNPLSGVASNAVGTLTNLANNNPLPGALSNAVSTLQNAAANNPLSGVASNAVGTLTNLAN CCCCHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCC NNPLPGALSNAVSTLQNAAANNPLSGVANNAVGTLTNLANNNPLPGALSNAVSTLQNAAT CCCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHC NNPLSGVASNAVGTLTNLANNNPLPGALSNVAGALAGAASNGSGALTGAAGNVTGALAGA CCCHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHCCCCCCCCEEECCCCCCCHHHCCC GSTAAGAISGAMSNNPLPGVVNNVVGTLANAIGSNPITPITSVASGLANALSVANPAALT CCHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHCCCHHHH AAANTVAGTLARAANGTPVAGAIGGLVAALPVANPAGALTSAANNAASTIATVAGTNPAA HHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCCCCCHH AIGGVAGALTGAAGTGVATASQLGSVGSALMGSGAASAGKVLTSGSAAFGSAAASAGSLL HHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCHHCCCCCHHHHHHHCCCHHH TTGAAAASSVVNSLGSSVGAVVASLPNLSVSSSKSTAAASNPLAPVSSTVATLVGALPK HHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHCCCCCCHHHHHHHHHHHCCCC >Mature Secondary Structure MKQNFKLTSIALSAAVAFGVAAATPAVAAGLDTLPVSASVTDLGGAGSGSAMLALAGGTQ CCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCEEEEEECCCC HGSIHASALGSADASISNVALDNLTGTLANAASTLQNAAANNPLSGVASNAVGTLTNLAN CCCEEHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCC NNPLPGALSNAVGTLQNAATNNPLSGVASNAVGTLTNLANNNPLPGALSNAVGTLQNAAA CCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHC NNPLSGVASNAVGTLTNLANNNPLPGALSNAVSTLQNAAANNPLSGVANNAVGTLTNLAN CCCCHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCC SNPLPGALSNAASTLQNAATNNPLSGVASNAVGTLTNLANSNPLPGALSNAVSTLQNAAA CCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHC NNPLSGVASNAVGTLTNLANNNPLPGALSNAVSTLQNAAANNPLSGVASNAVGTLTNLAN CCCCHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCC NNPLPGALSNAVSTLQNAAANNPLSGVANNAVGTLTNLANNNPLPGALSNAVSTLQNAAT CCCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHC NNPLSGVASNAVGTLTNLANNNPLPGALSNVAGALAGAASNGSGALTGAAGNVTGALAGA CCCHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHCCCCCCCCEEECCCCCCCHHHCCC GSTAAGAISGAMSNNPLPGVVNNVVGTLANAIGSNPITPITSVASGLANALSVANPAALT CCHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHCCCHHHH AAANTVAGTLARAANGTPVAGAIGGLVAALPVANPAGALTSAANNAASTIATVAGTNPAA HHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCCCCCHH AIGGVAGALTGAAGTGVATASQLGSVGSALMGSGAASAGKVLTSGSAAFGSAAASAGSLL HHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCHHCCCCCHHHHHHHCCCHHH TTGAAAASSVVNSLGSSVGAVVASLPNLSVSSSKSTAAASNPLAPVSSTVATLVGALPK HHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHCCCCCCHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA