| Definition | Burkholderia pseudomallei K96243 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_006350 |
| Length | 4,074,542 |
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The map label for this gene is 53720204
Identifier: 53720204
GI number: 53720204
Start: 3114474
End: 3114893
Strand: Reverse
Name: 53720204
Synonym: BPSL2594
Alternate gene names: NA
Gene position: 3114893-3114474 (Counterclockwise)
Preceding gene: 53720205
Following gene: 53720202
Centisome position: 76.45
GC content: 70.71
Gene sequence:
>420_bases ATGGATACGCTCTCGTCGCGTGTTCAATCGTTCATGGAGGCCGTGATGTCTTTTTCTCTTCATCGTGTCGTGTTGCCGCT CGTCGCCGCGGGCGCGGGCGTTTGCGCGCTCGCCGCGCCGCTTGCCGCAAGCGCCGACGAGATCGTCGTCGAGCAGGCGG TGCCCGGCGTCGTCGTCGCGCCGGCGATGCGCGAAGTCGTCGTCGTCGCGCCGAGCGCGCCGCCGCCCGTGCGCTACGAG GTCGTGCCCGAGCCGCGCGTCGGGTACGTGTGGGATCGCGGCCACTGGCGCTGGGATCACGATCGCTATGTGTGGATCGC CGGGCATTGGGAAGTCGAGCGCATCGGCATGCACTGGGCGCCGGGCCACTGGTCGCAGCGCGGCCCGGGCTGGGTCTGGG TCCGCGGCCACTGGGCCTGA
Upstream 100 bases:
>100_bases CGCGGCCGCGCCGCCGCCGCGCGCGCCCTTACTTCTCGTTGCACTTTCCGGCCTCCGGTAACGCAGCGCCTGTCTGCCGT TACGCCTTCCCGAGCATTGA
Downstream 100 bases:
>100_bases GGGGGCAGGGCAATGAAACGGACCTTGTTCGCTCTCGCGCTCGTCGCGCTGACGCTGGCCGGCTGCGTCGTCGTGCCGGC GCGGCCGGTGTACTACCGGC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 139; Mature: 139
Protein sequence:
>139_residues MDTLSSRVQSFMEAVMSFSLHRVVLPLVAAGAGVCALAAPLAASADEIVVEQAVPGVVVAPAMREVVVVAPSAPPPVRYE VVPEPRVGYVWDRGHWRWDHDRYVWIAGHWEVERIGMHWAPGHWSQRGPGWVWVRGHWA
Sequences:
>Translated_139_residues MDTLSSRVQSFMEAVMSFSLHRVVLPLVAAGAGVCALAAPLAASADEIVVEQAVPGVVVAPAMREVVVVAPSAPPPVRYE VVPEPRVGYVWDRGHWRWDHDRYVWIAGHWEVERIGMHWAPGHWSQRGPGWVWVRGHWA >Mature_139_residues MDTLSSRVQSFMEAVMSFSLHRVVLPLVAAGAGVCALAAPLAASADEIVVEQAVPGVVVAPAMREVVVVAPSAPPPVRYE VVPEPRVGYVWDRGHWRWDHDRYVWIAGHWEVERIGMHWAPGHWSQRGPGWVWVRGHWA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 15461; Mature: 15461
Theoretical pI: Translated: 6.89; Mature: 6.89
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 3.6 %Met (Translated Protein) 4.3 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 3.6 %Met (Mature Protein) 4.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDTLSSRVQSFMEAVMSFSLHRVVLPLVAAGAGVCALAAPLAASADEIVVEQAVPGVVVA CCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHCCCCCCCCEEHHHCCCCEEEC PAMREVVVVAPSAPPPVRYEVVPEPRVGYVWDRGHWRWDHDRYVWIAGHWEVERIGMHWA CCCCEEEEEECCCCCCEEEEECCCCCEEEEECCCCEEECCCCEEEEECCEEEEEECCEEC PGHWSQRGPGWVWVRGHWA CCCCCCCCCCEEEEEEECC >Mature Secondary Structure MDTLSSRVQSFMEAVMSFSLHRVVLPLVAAGAGVCALAAPLAASADEIVVEQAVPGVVVA CCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHCCCCCCCCEEHHHCCCCEEEC PAMREVVVVAPSAPPPVRYEVVPEPRVGYVWDRGHWRWDHDRYVWIAGHWEVERIGMHWA CCCCEEEEEECCCCCCEEEEECCCCCEEEEECCCCEEECCCCEEEEECCEEEEEECCEEC PGHWSQRGPGWVWVRGHWA CCCCCCCCCCEEEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA