| Definition | Burkholderia pseudomallei K96243 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_006350 |
| Length | 4,074,542 |
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The map label for this gene is metE [H]
Identifier: 53720155
GI number: 53720155
Start: 3071238
End: 3073532
Strand: Reverse
Name: metE [H]
Synonym: BPSL2545
Alternate gene names: 53720155
Gene position: 3073532-3071238 (Counterclockwise)
Preceding gene: 53720162
Following gene: 53720153
Centisome position: 75.43
GC content: 70.94
Gene sequence:
>2295_bases ATGACCACCGCACACATCCTGGGTTTTCCGCGCATCGGCGCGCAACGGGAACTGAAGTTCGCCCTCGAGCGCTACTGGCG CGACGGCGCGTCGGCCGACGCCGAGCGCGCGCTCGTCGATACCGGCCGCGCGCTGCGCGCCGAGCACTGGCGCATTGAGC GCGACGCCGGCCTCGACTGCGTGACGGTCGGCGATTTCGCGTGGTACGACCACGTGCTGACGACGCTCGCGCACGTCGGC GGCCTGCCGCGGCGTTTCGGCTTCGACGCGCGCGCGCTCACGCTCGCCGACTATTTCGCGGCCGCGCGCGGCAACGCCGC GCAGCCGGCGATGGAGATGACGAAGTGGTTCGATACGAACTATCACTACCTCGTGCCCGAGTACTCGCCCGCGACGACGT TCGGGCCGGGCGTCGAGTGGCTCTTCGACGAGGTGCGCGAGGCGCGCGCGCTCGGCTATCGCGCGAAGGCGGCGCTCGTC GGCCCGCTTACGCTGCTCTGGCTAGGCAAGGCGCGCGACGGGCTCGTCGAGCGCCTCGCGCTGCTGCCGCGCCTCGTGCC CGCGTATCGCGCGCTGCTCGCGCGGCTGAGGGAAGCGGGCGTCGACTGGGTGCAGATCGAGGAGCCGATCTTCTCGCTCG ATCTGCCCGACGCGTGGCGCGACGCGGCGCGGCCGACGTACGAAGCGCTCGCGCCCGGCGCGCCGAAGCTGCTCGTCGCG ACGTATTTCGACGACGCGAGCGAGCACGCGGCGCTGCTCAAGGCGCTGCCCGTCGCGGGCCTGCACATCGATCTCGTGCG CGCCGACGCGCAGCTCGACGCGTTCGTCGCGGACTATCCGGCCGACAAGGTGCTCTCGTGCGGCATCGTCGACGGCCGCA ACGTGTGGCGCAACGATCTCGACCGTTCGCTCGCGCGGCTCGCGCCGGTGCGCGACGCGCTCGGCGAGCGGCTGTGGGTC GCGACGAGCTGCTCGCTGCTGCATGTGCCCGTCGATCTCGCGCATGAGCCGAGGCTCGACGAGGAGCTGAAGACTTGGCT CGCATTCGCGGCGCAGAAGACGCGCGAGGTCGCCGCGCTGCGCGACGCGCTCGTGAAGGGGCGCGCGGCGGTCGCGGCCG AGTTCGATGACGCCGCCGCGGCGGCGGCCGCGCGGCGCACGTCGGCGCGCATTCACAATCCGCTCGTCAAGCGCCGCGTC GCGGCGCTGACCGACGCCGACGCGCGCCGCGCGAGCGCCTATAGCGTGCGTGCGGCCGCGCAGCGCGCGCGCTTCGGCTT GCCGCTGCTGCCGACGACGACGATCGGCTCGTTTCCGCAGACGCCGGAGATTCGCCGCGCGCGCGCCGCGTTCAAGCAGG GCGTGCTCGATCACCTCGGCTATCTGGAGGCGATGCGCGAGCAGGTGCGCATCGCGATCGACAAGCAGCTCGCGTACGGC CTCGACGTGCTCGTGCACGGCGAGGCCGAGCGCAACGACATGGTCGAATACTTCGGCGAACTGCTGTGGGGCTTCGCGAT CACGAGCAACGGCTGGGTCCAGAGCTACGGTTCGCGCTGCGTGAAGCCGCCCCTCGTTTATGGCGACGTGTATTTGCCGG AGCCGATGACGGTCGGCTGGGCGTCGTATGCGCAGAGCCTGAGCGCGAAGCCGGTGAAGGGCATGCTGACGGGGCCCGTG ACGATGCTGCAATGGTCGTTCGTGCGCGACGACCAGCCGCGCGCGACGACGGCCTTGCAGATCGCGCTCGCGCTGCGGCA GGAGACGCTCGACCTCGAGAAGGCCGGCATCGGGATGATCCAGATCGACGAGCCGGCGCTGCGCGAGGGGTTGCCGCTGA AGGCGCGCGAGCGCGCCGCGTATCTGGACTGGGCGGTGCGCGCGTTCGGGATCGCGGCGTCGGGCGTCGCGGACGACACG CAGATCCACACGCACATGTGCTATTCGGAGTTCGGCGACATCCTGCCGTCGATCGCGGCGCTCGACGCGGACGTGATCTC GATCGAGACGACCCGCTCGAACATGGAACTGCTCGACGCGTTCGAGACGTTCGACTATCCGAACGAGATCGGGCCGGGCG TCTATGACATCCATTCGCCGCGCGTGCCGGACGCGGACGAGATCGAGCGACTCATCCTGCTCGCGCTCGAGCGGATTCCG GCGCAGCGCCTGTGGGTGAATCCGGACTGCGGGCTGAAGACGCGCGAGTGGCGGCAGGTCGACGCGGCGCTCGCGGCGAT GGTCGACGCGGCCAAGCGCGTGCGGCAGAAGGTCGAGGAGGAGGCGCCGGCGTGA
Upstream 100 bases:
>100_bases GCGAATGATATTGAAAAAAATTCATGTTGTTCGGCAAAAACTTTCGTTTGAGTAATGATAGGGCAAATCCGATACTGCCG GTCACTTCTGGAGGATCGAG
Downstream 100 bases:
>100_bases CGCGGCGCGCGGCGGTGCGAAAGAGGTGTGCGCAGAAGGGGGCGTGAATGCGCGTGAAGGGGTGTGAGGGTGCGTGAGAG CGGCGCGCCGAGCGCGGCGC
Product: 5-methyltetrahydropteroyltriglutamate-- homocysteine S-methyltransferase
Products: NA
Alternate protein names: Cobalamin-independent methionine synthase; Methionine synthase, vitamin-B12 independent isozyme [H]
Number of amino acids: Translated: 764; Mature: 763
Protein sequence:
>764_residues MTTAHILGFPRIGAQRELKFALERYWRDGASADAERALVDTGRALRAEHWRIERDAGLDCVTVGDFAWYDHVLTTLAHVG GLPRRFGFDARALTLADYFAAARGNAAQPAMEMTKWFDTNYHYLVPEYSPATTFGPGVEWLFDEVREARALGYRAKAALV GPLTLLWLGKARDGLVERLALLPRLVPAYRALLARLREAGVDWVQIEEPIFSLDLPDAWRDAARPTYEALAPGAPKLLVA TYFDDASEHAALLKALPVAGLHIDLVRADAQLDAFVADYPADKVLSCGIVDGRNVWRNDLDRSLARLAPVRDALGERLWV ATSCSLLHVPVDLAHEPRLDEELKTWLAFAAQKTREVAALRDALVKGRAAVAAEFDDAAAAAAARRTSARIHNPLVKRRV AALTDADARRASAYSVRAAAQRARFGLPLLPTTTIGSFPQTPEIRRARAAFKQGVLDHLGYLEAMREQVRIAIDKQLAYG LDVLVHGEAERNDMVEYFGELLWGFAITSNGWVQSYGSRCVKPPLVYGDVYLPEPMTVGWASYAQSLSAKPVKGMLTGPV TMLQWSFVRDDQPRATTALQIALALRQETLDLEKAGIGMIQIDEPALREGLPLKARERAAYLDWAVRAFGIAASGVADDT QIHTHMCYSEFGDILPSIAALDADVISIETTRSNMELLDAFETFDYPNEIGPGVYDIHSPRVPDADEIERLILLALERIP AQRLWVNPDCGLKTREWRQVDAALAAMVDAAKRVRQKVEEEAPA
Sequences:
>Translated_764_residues MTTAHILGFPRIGAQRELKFALERYWRDGASADAERALVDTGRALRAEHWRIERDAGLDCVTVGDFAWYDHVLTTLAHVG GLPRRFGFDARALTLADYFAAARGNAAQPAMEMTKWFDTNYHYLVPEYSPATTFGPGVEWLFDEVREARALGYRAKAALV GPLTLLWLGKARDGLVERLALLPRLVPAYRALLARLREAGVDWVQIEEPIFSLDLPDAWRDAARPTYEALAPGAPKLLVA TYFDDASEHAALLKALPVAGLHIDLVRADAQLDAFVADYPADKVLSCGIVDGRNVWRNDLDRSLARLAPVRDALGERLWV ATSCSLLHVPVDLAHEPRLDEELKTWLAFAAQKTREVAALRDALVKGRAAVAAEFDDAAAAAAARRTSARIHNPLVKRRV AALTDADARRASAYSVRAAAQRARFGLPLLPTTTIGSFPQTPEIRRARAAFKQGVLDHLGYLEAMREQVRIAIDKQLAYG LDVLVHGEAERNDMVEYFGELLWGFAITSNGWVQSYGSRCVKPPLVYGDVYLPEPMTVGWASYAQSLSAKPVKGMLTGPV TMLQWSFVRDDQPRATTALQIALALRQETLDLEKAGIGMIQIDEPALREGLPLKARERAAYLDWAVRAFGIAASGVADDT QIHTHMCYSEFGDILPSIAALDADVISIETTRSNMELLDAFETFDYPNEIGPGVYDIHSPRVPDADEIERLILLALERIP AQRLWVNPDCGLKTREWRQVDAALAAMVDAAKRVRQKVEEEAPA >Mature_763_residues TTAHILGFPRIGAQRELKFALERYWRDGASADAERALVDTGRALRAEHWRIERDAGLDCVTVGDFAWYDHVLTTLAHVGG LPRRFGFDARALTLADYFAAARGNAAQPAMEMTKWFDTNYHYLVPEYSPATTFGPGVEWLFDEVREARALGYRAKAALVG PLTLLWLGKARDGLVERLALLPRLVPAYRALLARLREAGVDWVQIEEPIFSLDLPDAWRDAARPTYEALAPGAPKLLVAT YFDDASEHAALLKALPVAGLHIDLVRADAQLDAFVADYPADKVLSCGIVDGRNVWRNDLDRSLARLAPVRDALGERLWVA TSCSLLHVPVDLAHEPRLDEELKTWLAFAAQKTREVAALRDALVKGRAAVAAEFDDAAAAAAARRTSARIHNPLVKRRVA ALTDADARRASAYSVRAAAQRARFGLPLLPTTTIGSFPQTPEIRRARAAFKQGVLDHLGYLEAMREQVRIAIDKQLAYGL DVLVHGEAERNDMVEYFGELLWGFAITSNGWVQSYGSRCVKPPLVYGDVYLPEPMTVGWASYAQSLSAKPVKGMLTGPVT MLQWSFVRDDQPRATTALQIALALRQETLDLEKAGIGMIQIDEPALREGLPLKARERAAYLDWAVRAFGIAASGVADDTQ IHTHMCYSEFGDILPSIAALDADVISIETTRSNMELLDAFETFDYPNEIGPGVYDIHSPRVPDADEIERLILLALERIPA QRLWVNPDCGLKTREWRQVDAALAAMVDAAKRVRQKVEEEAPA
Specific function: Catalyzes the transfer of a methyl group from 5- methyltetrahydrofolate to homocysteine resulting in methionine formation [H]
COG id: COG0620
COG function: function code E; Methionine synthase II (cobalamin-independent)
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the vitamin-B12 independent methionine synthase family [H]
Homologues:
Organism=Escherichia coli, GI2367304, Length=757, Percent_Identity=57.1994715984148, Blast_Score=835, Evalue=0.0, Organism=Saccharomyces cerevisiae, GI6320936, Length=776, Percent_Identity=46.0051546391753, Blast_Score=641, Evalue=0.0,
Paralogues:
None
Copy number: 45,000 Molecules/Cell In: Glucose minimal media [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR013215 - InterPro: IPR006276 - InterPro: IPR002629 [H]
Pfam domain/function: PF08267 Meth_synt_1; PF01717 Meth_synt_2 [H]
EC number: =2.1.1.14 [H]
Molecular weight: Translated: 84451; Mature: 84320
Theoretical pI: Translated: 5.70; Mature: 5.70
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 2.4 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 2.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTTAHILGFPRIGAQRELKFALERYWRDGASADAERALVDTGRALRAEHWRIERDAGLDC CCCCEEECCCCCCCHHHHHHHHHHHHCCCCCCCHHHHHHHCCHHHHHHHCEEECCCCCCE VTVGDFAWYDHVLTTLAHVGGLPRRFGFDARALTLADYFAAARGNAAQPAMEMTKWFDTN EEECCHHHHHHHHHHHHHHCCCCHHHCCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHCCC YHYLVPEYSPATTFGPGVEWLFDEVREARALGYRAKAALVGPLTLLWLGKARDGLVERLA CEEECCCCCCCCCCCCCHHHHHHHHHHHHHHCHHHHHHHHHHHHHHEECCHHHHHHHHHH LLPRLVPAYRALLARLREAGVDWVQIEEPIFSLDLPDAWRDAARPTYEALAPGAPKLLVA HHHHHHHHHHHHHHHHHHCCCCEEEECCCEEECCCCHHHHHHCCCCHHHHCCCCCCEEEE TYFDDASEHAALLKALPVAGLHIDLVRADAQLDAFVADYPADKVLSCGIVDGRNVWRNDL EECCCCHHHHHHHHHHCCCCCEEEEEECCCHHHHHHHCCCCCHHEEECCCCCCHHHHHHH DRSLARLAPVRDALGERLWVATSCSLLHVPVDLAHEPRLDEELKTWLAFAAQKTREVAAL HHHHHHHHHHHHHHCCCEEEEECCEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHH RDALVKGRAAVAAEFDDAAAAAAARRTSARIHNPLVKRRVAALTDADARRASAYSVRAAA HHHHHHCCHHEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHH QRARFGLPLLPTTTIGSFPQTPEIRRARAAFKQGVLDHLGYLEAMREQVRIAIDKQLAYG HHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC LDVLVHGEAERNDMVEYFGELLWGFAITSNGWVQSYGSRCVKPPLVYGDVYLPEPMTVGW CEEEEECCCCHHHHHHHHHHHHHHHHCCCCCHHHHHCCCCCCCCEEECCEECCCCCCCCH ASYAQSLSAKPVKGMLTGPVTMLQWSFVRDDQPRATTALQIALALRQETLDLEKAGIGMI HHHHHHCCCCCCCCHHCCCHHHHEEHHHCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCEE QIDEPALREGLPLKARERAAYLDWAVRAFGIAASGVADDTQIHTHMCYSEFGDILPSIAA EECCHHHHCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHH LDADVISIETTRSNMELLDAFETFDYPNEIGPGVYDIHSPRVPDADEIERLILLALERIP CCCCEEEEEECCCHHHHHHHHHHCCCCCCCCCCCEECCCCCCCCHHHHHHHHHHHHHHCC AQRLWVNPDCGLKTREWRQVDAALAAMVDAAKRVRQKVEEEAPA HHHEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure TTAHILGFPRIGAQRELKFALERYWRDGASADAERALVDTGRALRAEHWRIERDAGLDC CCCEEECCCCCCCHHHHHHHHHHHHCCCCCCCHHHHHHHCCHHHHHHHCEEECCCCCCE VTVGDFAWYDHVLTTLAHVGGLPRRFGFDARALTLADYFAAARGNAAQPAMEMTKWFDTN EEECCHHHHHHHHHHHHHHCCCCHHHCCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHCCC YHYLVPEYSPATTFGPGVEWLFDEVREARALGYRAKAALVGPLTLLWLGKARDGLVERLA CEEECCCCCCCCCCCCCHHHHHHHHHHHHHHCHHHHHHHHHHHHHHEECCHHHHHHHHHH LLPRLVPAYRALLARLREAGVDWVQIEEPIFSLDLPDAWRDAARPTYEALAPGAPKLLVA HHHHHHHHHHHHHHHHHHCCCCEEEECCCEEECCCCHHHHHHCCCCHHHHCCCCCCEEEE TYFDDASEHAALLKALPVAGLHIDLVRADAQLDAFVADYPADKVLSCGIVDGRNVWRNDL EECCCCHHHHHHHHHHCCCCCEEEEEECCCHHHHHHHCCCCCHHEEECCCCCCHHHHHHH DRSLARLAPVRDALGERLWVATSCSLLHVPVDLAHEPRLDEELKTWLAFAAQKTREVAAL HHHHHHHHHHHHHHCCCEEEEECCEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHH RDALVKGRAAVAAEFDDAAAAAAARRTSARIHNPLVKRRVAALTDADARRASAYSVRAAA HHHHHHCCHHEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHH QRARFGLPLLPTTTIGSFPQTPEIRRARAAFKQGVLDHLGYLEAMREQVRIAIDKQLAYG HHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC LDVLVHGEAERNDMVEYFGELLWGFAITSNGWVQSYGSRCVKPPLVYGDVYLPEPMTVGW CEEEEECCCCHHHHHHHHHHHHHHHHCCCCCHHHHHCCCCCCCCEEECCEECCCCCCCCH ASYAQSLSAKPVKGMLTGPVTMLQWSFVRDDQPRATTALQIALALRQETLDLEKAGIGMI HHHHHHCCCCCCCCHHCCCHHHHEEHHHCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCEE QIDEPALREGLPLKARERAAYLDWAVRAFGIAASGVADDTQIHTHMCYSEFGDILPSIAA EECCHHHHCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHH LDADVISIETTRSNMELLDAFETFDYPNEIGPGVYDIHSPRVPDADEIERLILLALERIP CCCCEEEEEECCCHHHHHHHHHHCCCCCCCCCCCEECCCCCCCCHHHHHHHHHHHHHHCC AQRLWVNPDCGLKTREWRQVDAALAAMVDAAKRVRQKVEEEAPA HHHEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA