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The map label for this gene is nudL [H]

Identifier: 53720095

GI number: 53720095

Start: 2999302

End: 2999985

Strand: Reverse

Name: nudL [H]

Synonym: BPSL2486

Alternate gene names: 53720095

Gene position: 2999985-2999302 (Counterclockwise)

Preceding gene: 53720097

Following gene: 53720094

Centisome position: 73.63

GC content: 69.44

Gene sequence:

>684_bases
TTGATCCGTCGCCCCATCATCGACCCTGAAGTGCTGCCGATCGAGACGACCGGCGCCGACCTGCCAGTCGTCCGGCCGTC
GTCGATGACGCCGGACGGCCTGCGCGAGCGTTTCGCCGAGCCGCCCGAATGGACGCAGGAGCCCGCCGAGGCGCAGCTTG
CCCACGGCGTCGATCCGCGCAGCGCGGCCGTGCTCGTGCCGCTCGTCGTGCGTGAACGCGGCCTGACGGTGCTGCTCACG
CAGCGCGCGGACCACCTGAACGATCATGCCGGCCAGATCAGCTTTCCGGGCGGGCGCCGCGAGCCCGATGACCGCGACGC
GAACGCCACCGCGCTGCGCGAGGCGCGCGAGGAAATCGCGCTTGCGCACGAGCGCGTCGAGCTGCTGGGCGCGCTGCCCG
ACTATCTGACGGGCACGGGCTTTTGCGTGACGCCCGTCGTCGGGCTCGTCCATCCGCCATTCACGGTGCAGCCGGATACG
CTCGAAGTGGCCGAGATCTTCGAGGTGCCGCTCGATTTCCTGATGAATCCCGCGCATCACCAGATCAGGGTGTTGCGCTG
GGAGGGCGGCGAGCGGCGCTTTTTCGCGATGCCGTATCCGCGCGGGCCGGTCGGCGGCCAGTATTTCATCTGGGGCGCGA
CGGCCGGCATGCTGCGCAACCTGTATCGCTTTCTGTCGGCCTAA

Upstream 100 bases:

>100_bases
GCCGCGCTCGACGGTGGCGCCATCCGGCGAGCGACTCGCCGCGCGCTTTTTTCTTTTCGGCGCGACAATATGGCCATATC
CATTCCGAGCAGAGCTTGAC

Downstream 100 bases:

>100_bases
TGGCGCGCGCCACAGTCGGTGCACGCCGGAGCCATCCGCTGCGCCCGCTGTGCTATCTTTACGCGAAAAATCAATCATCC
AGAACGGCACGGCCCTTCGC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 227; Mature: 227

Protein sequence:

>227_residues
MIRRPIIDPEVLPIETTGADLPVVRPSSMTPDGLRERFAEPPEWTQEPAEAQLAHGVDPRSAAVLVPLVVRERGLTVLLT
QRADHLNDHAGQISFPGGRREPDDRDANATALREAREEIALAHERVELLGALPDYLTGTGFCVTPVVGLVHPPFTVQPDT
LEVAEIFEVPLDFLMNPAHHQIRVLRWEGGERRFFAMPYPRGPVGGQYFIWGATAGMLRNLYRFLSA

Sequences:

>Translated_227_residues
MIRRPIIDPEVLPIETTGADLPVVRPSSMTPDGLRERFAEPPEWTQEPAEAQLAHGVDPRSAAVLVPLVVRERGLTVLLT
QRADHLNDHAGQISFPGGRREPDDRDANATALREAREEIALAHERVELLGALPDYLTGTGFCVTPVVGLVHPPFTVQPDT
LEVAEIFEVPLDFLMNPAHHQIRVLRWEGGERRFFAMPYPRGPVGGQYFIWGATAGMLRNLYRFLSA
>Mature_227_residues
MIRRPIIDPEVLPIETTGADLPVVRPSSMTPDGLRERFAEPPEWTQEPAEAQLAHGVDPRSAAVLVPLVVRERGLTVLLT
QRADHLNDHAGQISFPGGRREPDDRDANATALREAREEIALAHERVELLGALPDYLTGTGFCVTPVVGLVHPPFTVQPDT
LEVAEIFEVPLDFLMNPAHHQIRVLRWEGGERRFFAMPYPRGPVGGQYFIWGATAGMLRNLYRFLSA

Specific function: Probably mediates the hydrolysis of some nucleoside diphosphate derivatives [H]

COG id: COG0494

COG function: function code LR; NTP pyrophosphohydrolases including oxidative damage repair enzymes

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 nudix hydrolase domain [H]

Homologues:

Organism=Homo sapiens, GI157785656, Length=155, Percent_Identity=38.0645161290323, Blast_Score=101, Evalue=7e-22,
Organism=Escherichia coli, GI1788115, Length=167, Percent_Identity=42.5149700598802, Blast_Score=91, Evalue=5e-20,
Organism=Caenorhabditis elegans, GI17536993, Length=120, Percent_Identity=38.3333333333333, Blast_Score=75, Evalue=2e-14,
Organism=Drosophila melanogaster, GI18859683, Length=173, Percent_Identity=36.9942196531792, Blast_Score=80, Evalue=1e-15,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000086
- InterPro:   IPR015797
- InterPro:   IPR000059 [H]

Pfam domain/function: PF00293 NUDIX [H]

EC number: NA

Molecular weight: Translated: 25236; Mature: 25236

Theoretical pI: Translated: 5.14; Mature: 5.14

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIRRPIIDPEVLPIETTGADLPVVRPSSMTPDGLRERFAEPPEWTQEPAEAQLAHGVDPR
CCCCCCCCCCEEEEECCCCCCCEECCCCCCCHHHHHHCCCCCCCCCCCHHHHHHCCCCCC
SAAVLVPLVVRERGLTVLLTQRADHLNDHAGQISFPGGRREPDDRDANATALREAREEIA
CCEEEEHHHHHCCCCEEEEECCCHHCCCCCCEEECCCCCCCCCCCCCCHHHHHHHHHHHH
LAHERVELLGALPDYLTGTGFCVTPVVGLVHPPFTVQPDTLEVAEIFEVPLDFLMNPAHH
HHHHHHHHHHHCHHHHCCCCHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCC
QIRVLRWEGGERRFFAMPYPRGPVGGQYFIWGATAGMLRNLYRFLSA
EEEEEEEECCCEEEEECCCCCCCCCCEEEEECCHHHHHHHHHHHHCC
>Mature Secondary Structure
MIRRPIIDPEVLPIETTGADLPVVRPSSMTPDGLRERFAEPPEWTQEPAEAQLAHGVDPR
CCCCCCCCCCEEEEECCCCCCCEECCCCCCCHHHHHHCCCCCCCCCCCHHHHHHCCCCCC
SAAVLVPLVVRERGLTVLLTQRADHLNDHAGQISFPGGRREPDDRDANATALREAREEIA
CCEEEEHHHHHCCCCEEEEECCCHHCCCCCCEEECCCCCCCCCCCCCCHHHHHHHHHHHH
LAHERVELLGALPDYLTGTGFCVTPVVGLVHPPFTVQPDTLEVAEIFEVPLDFLMNPAHH
HHHHHHHHHHHCHHHHCCCCHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCC
QIRVLRWEGGERRFFAMPYPRGPVGGQYFIWGATAGMLRNLYRFLSA
EEEEEEEECCCEEEEECCCCCCCCCCEEEEECCHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 14528314 [H]