| Definition | Burkholderia pseudomallei K96243 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_006350 |
| Length | 4,074,542 |
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The map label for this gene is 53720043
Identifier: 53720043
GI number: 53720043
Start: 2943087
End: 2943560
Strand: Reverse
Name: 53720043
Synonym: BPSL2437
Alternate gene names: NA
Gene position: 2943560-2943087 (Counterclockwise)
Preceding gene: 53720044
Following gene: 53720042
Centisome position: 72.24
GC content: 78.27
Gene sequence:
>474_bases TTGACGGAGCCGTTCCATGCCGCATCGGCAGGCACGCAGCACGTCGTGCTGCGCGCGTCGGCGTGCCTGCGCGTCGCGTG CGCGCTGTTCGTGCCGGCCGTCGGCGCGGCGCTCTATGCGTGCGCCGCGCCGCTCGTCGGCGGCGGCGGGGCGGCGGCAC TCGCGGGGCTCGCCGCGGCGCTCGTCGCGCTGCGTGCGCGGGCCGCGTGCGTGCGGCATCAGCCGGCGGCGTTGCTGATC GACGCCGGCGCGGGCGTGCTCGCGGCGTTCGATCGCGATGGGCGGCGCCTCGCGCGCGGGCAGATCGCCGGCTGCACGCA ATGGAGCGATCTGCTTGTCGTGCTGAGGGTGCAGGGCCGCGGCCGGCGCGTGACGCCGCTCGTCATTCCGGCCGATGCGG TCGACGCGGCCGTGTTCCGCGCGCTCTGCGTGCTGGGCCGGCGGGCCGCGCGCGGGGCGCTCGCGGCGGCATGA
Upstream 100 bases:
>100_bases AAGCGCGCGAGATGAAGATCGACGTCGCGTTGAAGAACTCCTTCGGCTTCGGCGGGACTAACGGCACGCTGGTCTTCAAG CGCGCCTGACGCGGGGTCGC
Downstream 100 bases:
>100_bases CGCCCGCGCGGCAGGCCGCTTCCGGTCGAAAACGCCCATGAGCGCCTCGAGCGGGAACGTTACAATAGCGCTCCGCGTTG CTTCCCTCGTTTACGGATTT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 157; Mature: 156
Protein sequence:
>157_residues MTEPFHAASAGTQHVVLRASACLRVACALFVPAVGAALYACAAPLVGGGGAAALAGLAAALVALRARAACVRHQPAALLI DAGAGVLAAFDRDGRRLARGQIAGCTQWSDLLVVLRVQGRGRRVTPLVIPADAVDAAVFRALCVLGRRAARGALAAA
Sequences:
>Translated_157_residues MTEPFHAASAGTQHVVLRASACLRVACALFVPAVGAALYACAAPLVGGGGAAALAGLAAALVALRARAACVRHQPAALLI DAGAGVLAAFDRDGRRLARGQIAGCTQWSDLLVVLRVQGRGRRVTPLVIPADAVDAAVFRALCVLGRRAARGALAAA >Mature_156_residues TEPFHAASAGTQHVVLRASACLRVACALFVPAVGAALYACAAPLVGGGGAAALAGLAAALVALRARAACVRHQPAALLID AGAGVLAAFDRDGRRLARGQIAGCTQWSDLLVVLRVQGRGRRVTPLVIPADAVDAAVFRALCVLGRRAARGALAAA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 15739; Mature: 15607
Theoretical pI: Translated: 11.63; Mature: 11.63
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
3.8 %Cys (Translated Protein) 0.6 %Met (Translated Protein) 4.5 %Cys+Met (Translated Protein) 3.8 %Cys (Mature Protein) 0.0 %Met (Mature Protein) 3.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTEPFHAASAGTQHVVLRASACLRVACALFVPAVGAALYACAAPLVGGGGAAALAGLAAA CCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHH LVALRARAACVRHQPAALLIDAGAGVLAAFDRDGRRLARGQIAGCTQWSDLLVVLRVQGR HHHHHHHHHHHCCCCCEEEEECCCCEEEEECCCCHHHHCCCCCCCCCHHHEEEEEEECCC GRRVTPLVIPADAVDAAVFRALCVLGRRAARGALAAA CCEECEEEECCHHHHHHHHHHHHHHHHHHHCCCCCCC >Mature Secondary Structure TEPFHAASAGTQHVVLRASACLRVACALFVPAVGAALYACAAPLVGGGGAAALAGLAAA CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHH LVALRARAACVRHQPAALLIDAGAGVLAAFDRDGRRLARGQIAGCTQWSDLLVVLRVQGR HHHHHHHHHHHCCCCCEEEEECCCCEEEEECCCCHHHHCCCCCCCCCHHHEEEEEEECCC GRRVTPLVIPADAVDAAVFRALCVLGRRAARGALAAA CCEECEEEECCHHHHHHHHHHHHHHHHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA