Definition Burkholderia pseudomallei K96243 chromosome chromosome 1, complete sequence.
Accession NC_006350
Length 4,074,542

Click here to switch to the map view.

The map label for this gene is 53719944

Identifier: 53719944

GI number: 53719944

Start: 2820398

End: 2820856

Strand: Reverse

Name: 53719944

Synonym: BPSL2334

Alternate gene names: NA

Gene position: 2820856-2820398 (Counterclockwise)

Preceding gene: 53719945

Following gene: 53719943

Centisome position: 69.23

GC content: 61.22

Gene sequence:

>459_bases
ATGAAAACGTTAGATGTGTCTCAGGCTGCTGCCGCCGCACATGCGGGCGGTGTCCTGTCGGCTGTTCTCAAGGCTGAGGG
CGGTTCATTTTACGTCGAGCTGGAGACGCGGACGGCTGGAACGGCCGTGCTGGTCACGTCGAACAATCGTCGGCCGCGTG
CGTTTCGGAACCCGGTCAAGGCGCTTGAGGTGATTCGCGAGCTTGGGTTGCAGTCGGGGCGTTTCTCGCTCGAAGCATGG
CGACCGGATGAGGTCGAGATCGAGCGTTCAAGCCGTCCGGATCGTGCAGCGGCGATGAAGCAGACGCACGCGAATGCGGC
GGCCTATGACAAATGGTTGCGCGAGCAGGTGCAGGCGTCGATCGACGACCCGCGCCCGAGTATCGAGCATGAGGACGTAA
TGAAAAAGGCTCTGGCCCGCGTCGAAGCGATGCGAAAGGGGAAGCGTGCTAAGACTTAA

Upstream 100 bases:

>100_bases
CGGTGAGATGGAGGTTTTACGTCAAATAAAGGGGGCGGAATGCTATTGGCTGTGGCACGATGTATTATAGATCGTGCCGT
TATCTACTAAAGGTTGTGCC

Downstream 100 bases:

>100_bases
GTGGCGGCCGTTGGCCGAGGAAGACCTGTTGTGTATCTTGGAGTTTATCGGGGAAGACGATCCGGACGCCGCATTAGCCC
TGGTGCAAATGATTCGTGAA

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 152; Mature: 152

Protein sequence:

>152_residues
MKTLDVSQAAAAAHAGGVLSAVLKAEGGSFYVELETRTAGTAVLVTSNNRRPRAFRNPVKALEVIRELGLQSGRFSLEAW
RPDEVEIERSSRPDRAAAMKQTHANAAAYDKWLREQVQASIDDPRPSIEHEDVMKKALARVEAMRKGKRAKT

Sequences:

>Translated_152_residues
MKTLDVSQAAAAAHAGGVLSAVLKAEGGSFYVELETRTAGTAVLVTSNNRRPRAFRNPVKALEVIRELGLQSGRFSLEAW
RPDEVEIERSSRPDRAAAMKQTHANAAAYDKWLREQVQASIDDPRPSIEHEDVMKKALARVEAMRKGKRAKT
>Mature_152_residues
MKTLDVSQAAAAAHAGGVLSAVLKAEGGSFYVELETRTAGTAVLVTSNNRRPRAFRNPVKALEVIRELGLQSGRFSLEAW
RPDEVEIERSSRPDRAAAMKQTHANAAAYDKWLREQVQASIDDPRPSIEHEDVMKKALARVEAMRKGKRAKT

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 16738; Mature: 16738

Theoretical pI: Translated: 10.51; Mature: 10.51

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKTLDVSQAAAAAHAGGVLSAVLKAEGGSFYVELETRTAGTAVLVTSNNRRPRAFRNPVK
CCCCCHHHHHHHHHHHHHHHHHHHCCCCEEEEEEECCCCCEEEEEECCCCCCHHHHHHHH
ALEVIRELGLQSGRFSLEAWRPDEVEIERSSRPDRAAAMKQTHANAAAYDKWLREQVQAS
HHHHHHHHCCCCCCEEEECCCCCCEEECCCCCCHHHHHHHHHHCHHHHHHHHHHHHHHHC
IDDPRPSIEHEDVMKKALARVEAMRKGKRAKT
CCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCC
>Mature Secondary Structure
MKTLDVSQAAAAAHAGGVLSAVLKAEGGSFYVELETRTAGTAVLVTSNNRRPRAFRNPVK
CCCCCHHHHHHHHHHHHHHHHHHHCCCCEEEEEEECCCCCEEEEEECCCCCCHHHHHHHH
ALEVIRELGLQSGRFSLEAWRPDEVEIERSSRPDRAAAMKQTHANAAAYDKWLREQVQAS
HHHHHHHHCCCCCCEEEECCCCCCEEECCCCCCHHHHHHHHHHCHHHHHHHHHHHHHHHC
IDDPRPSIEHEDVMKKALARVEAMRKGKRAKT
CCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA