Click here to switch to the map view.

The map label for this gene is 53719932

Identifier: 53719932

GI number: 53719932

Start: 2804238

End: 2805227

Strand: Reverse

Name: 53719932

Synonym: BPSL2322

Alternate gene names: NA

Gene position: 2805227-2804238 (Counterclockwise)

Preceding gene: 53719933

Following gene: 53719931

Centisome position: 68.85

GC content: 66.67

Gene sequence:

>990_bases
ATGCTGCACGTGATCGCCGCCGCGCTCGACGGCTTCGTGTCCGATCTGCAGACCTGGCTGTACGTCGACATCGTGCAGCC
GCTGCTGTTCAAGGTCGGCCTGATGGACTACGACGAGGACACGTACGACGCGCTCTACTGGGTGATCGTCGGCGCGCTGC
AAGTCGTCGCGATGTACGTGCTGCTGCGCCCGCTCGAGGCACTGCGGCCCGTCGAGCGCTGGGAGAGCCGCCGCGAGGCG
CGCGTCGACGTGATCTACACGCTGATCGCGAAGCTCGGCATCTTCAGCCTGTTCTTCTTCTTCGCGATGCAGCCGCTGTT
CGACAGCGTCCAGGCATGGCTGCGCCTGCACGGGATCGCGAACGTCAATCTCGATTACCTGTGGCCGGGCGTCACCTCCA
GGCCGATCGTCGCGTTCGCGATCTATCTGATCGTGCTCGATTTCGCCGGCTACTGGTATCACCGCTGGCAGCACCGGATC
GGCATCTGGTGGGAACTGCACGCGGTGCATCACAGCCAGCGCCAGATGTCGCTCTGGTGCGACGACCGCAACCACCTGCT
CGACGATGTGCTGCAGGCGTGCTTCTTCGCGGCGATCGCGCTCGTGATCGGCGTGTCGCCGTCGCAGTTCGTCGTGCTGA
CCGCGGTCACGAACTTCATGCAGAGCGTTCAGCACGCGAACGCGCGGCTGCCGTTCGGCCGGCTCGCCGAGCGCCTCGTC
GTCAGCCCGACGTTCCATCGCCGCCATCACGCGGTCGGCTACGGCCACGAGGGCACGAAGTACGGCTGCAACTTCGGCGT
GCTGTTCCCGTGGTGGGACATGCTGTTTCGCACCGCATCGTGGAACCGCACGCCCGAGCCGACCGGCATCCGCGAGCAAT
ACGAGGGCGTGTCGTACGGCGACGGCTTCTGGGCGCAGCACTGGCTCGCGTTCGTGCGGATCGCGCGGCGGCTCGCGCCG
GGCAAGCGGCGCGACGTGGCGTCGGCGTAA

Upstream 100 bases:

>100_bases
ATTCAGACGATTTCGGTCGGCCGCTCGCCGCACGGAATCTACTTCTACGACCGGGCGCCGTGGACGGCGCCGAACGGCGC
GTGACGCCGGGGAGCGACTC

Downstream 100 bases:

>100_bases
GCGGCGCGCGGCGGCGGGGCGCAGGCCCGGCCCGGCTGCGGGCAGGGCCTCGGGGCGGGGCGGCGTTGGGCGCGTTGGCC
GCGGCCGGGGCGAGCGGCAC

Product: hypothetical protein

Products: NA

Alternate protein names: Sterol Desaturase; Transmembrane Protein; Sterol Desaturase-Related Protein; Sterol Desaturase-Like Protein; Sterol Desaturase Family Protein; Fatty Acid Hydroxylase Superfamily; Sterol Desaturase Transmembrane Protein

Number of amino acids: Translated: 329; Mature: 329

Protein sequence:

>329_residues
MLHVIAAALDGFVSDLQTWLYVDIVQPLLFKVGLMDYDEDTYDALYWVIVGALQVVAMYVLLRPLEALRPVERWESRREA
RVDVIYTLIAKLGIFSLFFFFAMQPLFDSVQAWLRLHGIANVNLDYLWPGVTSRPIVAFAIYLIVLDFAGYWYHRWQHRI
GIWWELHAVHHSQRQMSLWCDDRNHLLDDVLQACFFAAIALVIGVSPSQFVVLTAVTNFMQSVQHANARLPFGRLAERLV
VSPTFHRRHHAVGYGHEGTKYGCNFGVLFPWWDMLFRTASWNRTPEPTGIREQYEGVSYGDGFWAQHWLAFVRIARRLAP
GKRRDVASA

Sequences:

>Translated_329_residues
MLHVIAAALDGFVSDLQTWLYVDIVQPLLFKVGLMDYDEDTYDALYWVIVGALQVVAMYVLLRPLEALRPVERWESRREA
RVDVIYTLIAKLGIFSLFFFFAMQPLFDSVQAWLRLHGIANVNLDYLWPGVTSRPIVAFAIYLIVLDFAGYWYHRWQHRI
GIWWELHAVHHSQRQMSLWCDDRNHLLDDVLQACFFAAIALVIGVSPSQFVVLTAVTNFMQSVQHANARLPFGRLAERLV
VSPTFHRRHHAVGYGHEGTKYGCNFGVLFPWWDMLFRTASWNRTPEPTGIREQYEGVSYGDGFWAQHWLAFVRIARRLAP
GKRRDVASA
>Mature_329_residues
MLHVIAAALDGFVSDLQTWLYVDIVQPLLFKVGLMDYDEDTYDALYWVIVGALQVVAMYVLLRPLEALRPVERWESRREA
RVDVIYTLIAKLGIFSLFFFFAMQPLFDSVQAWLRLHGIANVNLDYLWPGVTSRPIVAFAIYLIVLDFAGYWYHRWQHRI
GIWWELHAVHHSQRQMSLWCDDRNHLLDDVLQACFFAAIALVIGVSPSQFVVLTAVTNFMQSVQHANARLPFGRLAERLV
VSPTFHRRHHAVGYGHEGTKYGCNFGVLFPWWDMLFRTASWNRTPEPTGIREQYEGVSYGDGFWAQHWLAFVRIARRLAP
GKRRDVASA

Specific function: Unknown

COG id: COG3000

COG function: function code I; Sterol desaturase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 38114; Mature: 38114

Theoretical pI: Translated: 7.79; Mature: 7.79

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure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CCHHHHHHHHHHHHHHHHCCCCCCCCCCC
>Mature Secondary Structure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CCHHHHHHHHHHHHHHHHCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA