| Definition | Burkholderia pseudomallei K96243 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_006350 |
| Length | 4,074,542 |
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The map label for this gene is tilS [H]
Identifier: 53719849
GI number: 53719849
Start: 2701984
End: 2703453
Strand: Reverse
Name: tilS [H]
Synonym: BPSL2240
Alternate gene names: 53719849
Gene position: 2703453-2701984 (Counterclockwise)
Preceding gene: 53719850
Following gene: 53719848
Centisome position: 66.35
GC content: 72.65
Gene sequence:
>1470_bases GTGATTCCCCCGCATGAATTTTCCGCCGAGCGCGTCGTGTTCGACGCGCTCGGCGTCGCGCTGTCCGCGTTGCCCGACGA CACGCCGATCGCGATCGCGTACAGCGGCGGCCTCGATTCGACCGTGCTGTTGCACGCGGCCGCGCGCATCGCGGGCGCCG GACGTTGCATCGCGTTGCATGTTCACCACGGCCTGAGCGCGAACGCCGACGCATGGCTCGCGCATTGCGCGGAAACGGCG CAAGCGCTCGGCGCGCGCTTCGACGCGGCGCGCGTCGACGTGCCGCGCGCGAGCGGGCAGGGCATCGAGGCGAGCGCGCG CGATGCGCGCTATCGCGCGCTCGAGACGATGTGCGCGCGATACGGCGCACGCACGCTGTGGCTCGCGCAGCATGCGGACG ATCAGGCGGAGACCGTGCTGTTGCAACTGCTGCGCGGCGCGGGCATCGCGGGGTTGGCGGCGATGGCGCCGCAGTACCGG CCGGCGCTTGCCGACGTCGTGCGCATGCGTCCGCTCCTGCATCTGTTGCGCGCGCAGCTCGAGCGCTACGCGCAGCAGCA TGCGCTGCGCTGGATCGACGACGAATCGAACACGGATACGCGCTATGCGCGCAATGCGCTGCGCGTCGACGTGCTTCCCG CGCTTGCGCCGCACTTTCCCGGCTTTCGCGATGCGCTCGCCCGCACCGCGCAGCATGCGGCGGCGGCCCAGCGTCTGCTC GACGATCTCGCCGCGATCGATCTGCGCGCGGTCGCGCGCGCGGACGTGCGCGTGTTGTCGCGCGATGCGCTCGTCGCGCT CGACGACGAGCGCGGGGCGAACTTGCTGCGTTACTGGATGCGCTCGCTCGGGCTGCCGGGCGCGTCGGCCGCGCGCCTTG CCGAGATGGTGAAGCAGTTGCGCGCGGCGCGCGATGCGCATGCGTTGCGCGTCGATCATGCGGGTTGGCGCCTGCGTCTT TATCGCGACGACGTCCAGTGGGAGGCGGGCGACGGTGCCGCATCGGAGGCGGCGCGCGCCGATGTGGCTGACGATGATGC GGCCGATGCGCGCGACGACAGGGCCGATGCATCGGCCGCCGCGCGGCTTCCGGCATGCGCGCTCGCCTGGCGGGGGCACG AGGTGTGGCGTCTGCCCGGCTGGCGCGGCAGTTTCGTGTTCAGTCCGGTCGCGGCGCACGAGCACGATGCGGTGCCGGAG GCGCTGCTCTCGTCAGCCGCGCTGCGCGCCTGCGCGCGCGCGGGCGGCGAGCGCATGCGCACCCGGCAGGGCGGCCCCGG GCGCACGCTGAAGAATCTGTTCCAGGAGCGCGGCGTGCCCGCCTGGCAGCGCGATGTGCCGCTGTTGTACGTCGGCGAGC GGTTGCTGTTCGTGCCGCGCATCGGCGTGAATCGGGCGACGCACGACGGCGCCGATGCGCCGGGCGGCTGGCGGCGCATC GAATGGCGGCCCGACATGCTGATCGCGTAA
Upstream 100 bases:
>100_bases CGCTTCGAGCGCTTGATGGCCTACGGCAAGTTCAAGGAAACGACGCCGCGCGCATGAGCGCCGCGCCGTCGAGTCGCGAG GCGCGTCGCGCCTTCCCGCA
Downstream 100 bases:
>100_bases GCGCTCCATCCGGCGCGCGTCGCGGCGGCCACGAATCCCGGGCGCGCGGAAAAAGGTCGCGACCCGGCCTGCCGGCGCCG TCGCGGCTTGTCAAGCAGCC
Product: putative cell cycle protein
Products: NA
Alternate protein names: tRNA(Ile)-2-lysyl-cytidine synthase; tRNA(Ile)-lysidine synthetase [H]
Number of amino acids: Translated: 489; Mature: 489
Protein sequence:
>489_residues MIPPHEFSAERVVFDALGVALSALPDDTPIAIAYSGGLDSTVLLHAAARIAGAGRCIALHVHHGLSANADAWLAHCAETA QALGARFDAARVDVPRASGQGIEASARDARYRALETMCARYGARTLWLAQHADDQAETVLLQLLRGAGIAGLAAMAPQYR PALADVVRMRPLLHLLRAQLERYAQQHALRWIDDESNTDTRYARNALRVDVLPALAPHFPGFRDALARTAQHAAAAQRLL DDLAAIDLRAVARADVRVLSRDALVALDDERGANLLRYWMRSLGLPGASAARLAEMVKQLRAARDAHALRVDHAGWRLRL YRDDVQWEAGDGAASEAARADVADDDAADARDDRADASAAARLPACALAWRGHEVWRLPGWRGSFVFSPVAAHEHDAVPE ALLSSAALRACARAGGERMRTRQGGPGRTLKNLFQERGVPAWQRDVPLLYVGERLLFVPRIGVNRATHDGADAPGGWRRI EWRPDMLIA
Sequences:
>Translated_489_residues MIPPHEFSAERVVFDALGVALSALPDDTPIAIAYSGGLDSTVLLHAAARIAGAGRCIALHVHHGLSANADAWLAHCAETA QALGARFDAARVDVPRASGQGIEASARDARYRALETMCARYGARTLWLAQHADDQAETVLLQLLRGAGIAGLAAMAPQYR PALADVVRMRPLLHLLRAQLERYAQQHALRWIDDESNTDTRYARNALRVDVLPALAPHFPGFRDALARTAQHAAAAQRLL DDLAAIDLRAVARADVRVLSRDALVALDDERGANLLRYWMRSLGLPGASAARLAEMVKQLRAARDAHALRVDHAGWRLRL YRDDVQWEAGDGAASEAARADVADDDAADARDDRADASAAARLPACALAWRGHEVWRLPGWRGSFVFSPVAAHEHDAVPE ALLSSAALRACARAGGERMRTRQGGPGRTLKNLFQERGVPAWQRDVPLLYVGERLLFVPRIGVNRATHDGADAPGGWRRI EWRPDMLIA >Mature_489_residues MIPPHEFSAERVVFDALGVALSALPDDTPIAIAYSGGLDSTVLLHAAARIAGAGRCIALHVHHGLSANADAWLAHCAETA QALGARFDAARVDVPRASGQGIEASARDARYRALETMCARYGARTLWLAQHADDQAETVLLQLLRGAGIAGLAAMAPQYR PALADVVRMRPLLHLLRAQLERYAQQHALRWIDDESNTDTRYARNALRVDVLPALAPHFPGFRDALARTAQHAAAAQRLL DDLAAIDLRAVARADVRVLSRDALVALDDERGANLLRYWMRSLGLPGASAARLAEMVKQLRAARDAHALRVDHAGWRLRL YRDDVQWEAGDGAASEAARADVADDDAADARDDRADASAAARLPACALAWRGHEVWRLPGWRGSFVFSPVAAHEHDAVPE ALLSSAALRACARAGGERMRTRQGGPGRTLKNLFQERGVPAWQRDVPLLYVGERLLFVPRIGVNRATHDGADAPGGWRRI EWRPDMLIA
Specific function: Ligates lysine onto the cytidine present at position 34 of the AUA codon-specific tRNA(Ile) that contains the anticodon CAU, in an ATP-dependent manner. Cytidine is converted to lysidine, thus changing the amino acid specificity of the tRNA from methionin
COG id: COG0037
COG function: function code D; Predicted ATPase of the PP-loop superfamily implicated in cell cycle control
Gene ontology:
Cell location: Cytoplasm (Probable) [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the tRNA(Ile)-lysidine synthase family [H]
Homologues:
Organism=Escherichia coli, GI1786386, Length=458, Percent_Identity=34.061135371179, Blast_Score=181, Evalue=1e-46,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR012094 - InterPro: IPR012796 - InterPro: IPR012795 - InterPro: IPR015262 - InterPro: IPR020825 - InterPro: IPR014729 - InterPro: IPR011063 [H]
Pfam domain/function: PF01171 ATP_bind_3; PF09179 DUF1946; PF11734 TilS_C [H]
EC number: NA
Molecular weight: Translated: 53137; Mature: 53137
Theoretical pI: Translated: 8.01; Mature: 8.01
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 2.7 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 2.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIPPHEFSAERVVFDALGVALSALPDDTPIAIAYSGGLDSTVLLHAAARIAGAGRCIALH CCCCCCCCHHHHHHHHHHHHHHHCCCCCCEEEEECCCCCHHHHHHHHHHHCCCCCEEEEE VHHGLSANADAWLAHCAETAQALGARFDAARVDVPRASGQGIEASARDARYRALETMCAR EECCCCCCHHHHHHHHHHHHHHHHCCCCHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHH YGARTLWLAQHADDQAETVLLQLLRGAGIAGLAAMAPQYRPALADVVRMRPLLHLLRAQL HCCCEEEEECCCCCHHHHHHHHHHHCCCHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHH ERYAQQHALRWIDDESNTDTRYARNALRVDVLPALAPHFPGFRDALARTAQHAAAAQRLL HHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHH DDLAAIDLRAVARADVRVLSRDALVALDDERGANLLRYWMRSLGLPGASAARLAEMVKQL HHHHHHHHHHHHHHHHHHHCCCCEEEECCCCCHHHHHHHHHHCCCCCCHHHHHHHHHHHH RAARDAHALRVDHAGWRLRLYRDDVQWEAGDGAASEAARADVADDDAADARDDRADASAA HHHHHHHHEEEECCCCEEEEEECCCCEECCCCCHHHHHHCCCCCCCCCCCCCCCCCHHHH ARLPACALAWRGHEVWRLPGWRGSFVFSPVAAHEHDAVPEALLSSAALRACARAGGERMR HHCCHHHHHCCCCEEEECCCCCCCEEECCHHHCCCCHHHHHHHHHHHHHHHHHCCHHHHH TRQGGPGRTLKNLFQERGVPAWQRDVPLLYVGERLLFVPRIGVNRATHDGADAPGGWRRI HCCCCCCHHHHHHHHHCCCCCHHHCCCEEEECCEEEEECCCCCCCCCCCCCCCCCCCEEE EWRPDMLIA EECCCCCCC >Mature Secondary Structure MIPPHEFSAERVVFDALGVALSALPDDTPIAIAYSGGLDSTVLLHAAARIAGAGRCIALH CCCCCCCCHHHHHHHHHHHHHHHCCCCCCEEEEECCCCCHHHHHHHHHHHCCCCCEEEEE VHHGLSANADAWLAHCAETAQALGARFDAARVDVPRASGQGIEASARDARYRALETMCAR EECCCCCCHHHHHHHHHHHHHHHHCCCCHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHH YGARTLWLAQHADDQAETVLLQLLRGAGIAGLAAMAPQYRPALADVVRMRPLLHLLRAQL HCCCEEEEECCCCCHHHHHHHHHHHCCCHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHH ERYAQQHALRWIDDESNTDTRYARNALRVDVLPALAPHFPGFRDALARTAQHAAAAQRLL HHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHH DDLAAIDLRAVARADVRVLSRDALVALDDERGANLLRYWMRSLGLPGASAARLAEMVKQL HHHHHHHHHHHHHHHHHHHCCCCEEEECCCCCHHHHHHHHHHCCCCCCHHHHHHHHHHHH RAARDAHALRVDHAGWRLRLYRDDVQWEAGDGAASEAARADVADDDAADARDDRADASAA HHHHHHHHEEEECCCCEEEEEECCCCEECCCCCHHHHHHCCCCCCCCCCCCCCCCCHHHH ARLPACALAWRGHEVWRLPGWRGSFVFSPVAAHEHDAVPEALLSSAALRACARAGGERMR HHCCHHHHHCCCCEEEECCCCCCCEEECCHHHCCCCHHHHHHHHHHHHHHHHHCCHHHHH TRQGGPGRTLKNLFQERGVPAWQRDVPLLYVGERLLFVPRIGVNRATHDGADAPGGWRRI HCCCCCCHHHHHHHHHCCCCCHHHCCCEEEECCEEEEECCCCCCCCCCCCCCCCCCCEEE EWRPDMLIA EECCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA