| Definition | Burkholderia pseudomallei K96243 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_006350 |
| Length | 4,074,542 |
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The map label for this gene is 53719833
Identifier: 53719833
GI number: 53719833
Start: 2668941
End: 2669975
Strand: Reverse
Name: 53719833
Synonym: BPSL2224
Alternate gene names: NA
Gene position: 2669975-2668941 (Counterclockwise)
Preceding gene: 53719834
Following gene: 53719832
Centisome position: 65.53
GC content: 73.72
Gene sequence:
>1035_bases ATGAGCGCGTCCGCGCCTGCGTCGCGCTCGTTCGAGCGCCGGCCGGTGCGCGTGCTGCGTGTGCTCGCGCGCCGCCACGT CGATTCGACGCGGATGGTCCGGCCGCGGGATTTCGACACGGCGCTCGTCGCGCAGGTGCCGGGCATGTCCGACATCGGCG ACGGCGAGCGCTACGTACCGCTGTGCGTCGACTGGCGCGACGCGCGGCTTTTCCTGAGCCGCTGGGACGACGACTGCGCG ATGACCGACGTGCCGTTTCTCTACCAGCGTCAACGGCGCACCGCGCGGCAACTGCTCGACGTGCCGTTCGAGCAGTTGGA GGCGCCCGGCCGCGCGGCGCGCATGACGCCGATCTTCATCTTCTCGGTGGGGCGCTGCGGCTCGACGCTGCTGTCGCGCT TGCTCGCGGCGGTGGGCGAGCAAGCGGTGTCGGAGCCGGACGTGCTCACGAGCGTCGCGCATTTCGACGACGCGGCCGAG CGCGCCGCGGCGCTGCCTGCGCGTGAGCGGATCGTGCAGAGCTGCGTCGCGGCGTTCGAGCCCGCGTGCGGGCCCGCGCC GATCATCAAGCTGCGCGCGCGCTGCAATCGCGCGGTGGACGTGTTCCTGAACGCGATGCCGCACGCGCGCTACGTGTTCA TGTGCCGCAATCGCGACGACTGGGTGCGCTCGAGCTCGCGCGCGTTCGGCGACAGCGGCGAGGCGCTCGCCGAGCTGCTC AAGGCGTCGGTCGAGGCGTTCGACCGGATGCACGCGGCCCGCGTCGATCCGCTGCTCGTCTGGTACGAGGATCTGCTCGC GGATCCGCTCGCGGCGCTACGGCGCATCCTGCGCGCGCGCGACGATCTGGACGCGCACCGCGCCGCCGTCGAGCGCGCGC TGCGCGCCGACGCGCAGGAAGGCTCGGGCCTGTCGCGCGCGTCGCTCGCGGCGCGCACGGGCGATGCCGGCGCGCTCGCC GCGTTCGACGCGCGCTGGCGCGAGATCCGGCCGGAGGCGCTGTTGCGCGAGCACGGCTTGGCGCGCCTGCGCTGA
Upstream 100 bases:
>100_bases GCGGCGAAGGGTTCACCGAAGAGGCGCAGGCGTTGCTGGGGGCGCTGTGGTGAGCGGCGCGAGCGGGAGCTCGCCGCCGC CCAATCGGGGCCGTGACGCG
Downstream 100 bases:
>100_bases ACCCTTGTTTCGAACAGGAATGGCGATGAATCTCGACAACCAGGTGCTGGAAAACCGCAAGCGGGTGCTGAAGATGCTGC ACGGCGCCGACGGCGGGCAT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 344; Mature: 343
Protein sequence:
>344_residues MSASAPASRSFERRPVRVLRVLARRHVDSTRMVRPRDFDTALVAQVPGMSDIGDGERYVPLCVDWRDARLFLSRWDDDCA MTDVPFLYQRQRRTARQLLDVPFEQLEAPGRAARMTPIFIFSVGRCGSTLLSRLLAAVGEQAVSEPDVLTSVAHFDDAAE RAAALPARERIVQSCVAAFEPACGPAPIIKLRARCNRAVDVFLNAMPHARYVFMCRNRDDWVRSSSRAFGDSGEALAELL KASVEAFDRMHAARVDPLLVWYEDLLADPLAALRRILRARDDLDAHRAAVERALRADAQEGSGLSRASLAARTGDAGALA AFDARWREIRPEALLREHGLARLR
Sequences:
>Translated_344_residues MSASAPASRSFERRPVRVLRVLARRHVDSTRMVRPRDFDTALVAQVPGMSDIGDGERYVPLCVDWRDARLFLSRWDDDCA MTDVPFLYQRQRRTARQLLDVPFEQLEAPGRAARMTPIFIFSVGRCGSTLLSRLLAAVGEQAVSEPDVLTSVAHFDDAAE RAAALPARERIVQSCVAAFEPACGPAPIIKLRARCNRAVDVFLNAMPHARYVFMCRNRDDWVRSSSRAFGDSGEALAELL KASVEAFDRMHAARVDPLLVWYEDLLADPLAALRRILRARDDLDAHRAAVERALRADAQEGSGLSRASLAARTGDAGALA AFDARWREIRPEALLREHGLARLR >Mature_343_residues SASAPASRSFERRPVRVLRVLARRHVDSTRMVRPRDFDTALVAQVPGMSDIGDGERYVPLCVDWRDARLFLSRWDDDCAM TDVPFLYQRQRRTARQLLDVPFEQLEAPGRAARMTPIFIFSVGRCGSTLLSRLLAAVGEQAVSEPDVLTSVAHFDDAAER AAALPARERIVQSCVAAFEPACGPAPIIKLRARCNRAVDVFLNAMPHARYVFMCRNRDDWVRSSSRAFGDSGEALAELLK ASVEAFDRMHAARVDPLLVWYEDLLADPLAALRRILRARDDLDAHRAAVERALRADAQEGSGLSRASLAARTGDAGALAA FDARWREIRPEALLREHGLARLR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 38314; Mature: 38183
Theoretical pI: Translated: 8.70; Mature: 8.70
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.0 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 4.4 %Cys+Met (Translated Protein) 2.0 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 4.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSASAPASRSFERRPVRVLRVLARRHVDSTRMVRPRDFDTALVAQVPGMSDIGDGERYVP CCCCCCCCCCHHCCHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHCCCCCCCCCCCCEEE LCVDWRDARLFLSRWDDDCAMTDVPFLYQRQRRTARQLLDVPFEQLEAPGRAARMTPIFI EEECCHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHCCHHHHCCCCCHHCCCEEEE FSVGRCGSTLLSRLLAAVGEQAVSEPDVLTSVAHFDDAAERAAALPARERIVQSCVAAFE EECCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHC PACGPAPIIKLRARCNRAVDVFLNAMPHARYVFMCRNRDDWVRSSSRAFGDSGEALAELL CCCCCHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCHHHHHHHHHCCCCCHHHHHHHH KASVEAFDRMHAARVDPLLVWYEDLLADPLAALRRILRARDDLDAHRAAVERALRADAQE HHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCC GSGLSRASLAARTGDAGALAAFDARWREIRPEALLREHGLARLR CCCCCHHHHHHCCCCCCHHHHHHHHHHHCCHHHHHHHCCHHCCC >Mature Secondary Structure SASAPASRSFERRPVRVLRVLARRHVDSTRMVRPRDFDTALVAQVPGMSDIGDGERYVP CCCCCCCCCHHCCHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHCCCCCCCCCCCCEEE LCVDWRDARLFLSRWDDDCAMTDVPFLYQRQRRTARQLLDVPFEQLEAPGRAARMTPIFI EEECCHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHCCHHHHCCCCCHHCCCEEEE FSVGRCGSTLLSRLLAAVGEQAVSEPDVLTSVAHFDDAAERAAALPARERIVQSCVAAFE EECCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHC PACGPAPIIKLRARCNRAVDVFLNAMPHARYVFMCRNRDDWVRSSSRAFGDSGEALAELL CCCCCHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCHHHHHHHHHCCCCCHHHHHHHH KASVEAFDRMHAARVDPLLVWYEDLLADPLAALRRILRARDDLDAHRAAVERALRADAQE HHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCC GSGLSRASLAARTGDAGALAAFDARWREIRPEALLREHGLARLR CCCCCHHHHHHCCCCCCHHHHHHHHHHHCCHHHHHHHCCHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA