Definition Burkholderia pseudomallei K96243 chromosome chromosome 1, complete sequence.
Accession NC_006350
Length 4,074,542

Click here to switch to the map view.

The map label for this gene is 53719774

Identifier: 53719774

GI number: 53719774

Start: 2599226

End: 2600512

Strand: Reverse

Name: 53719774

Synonym: BPSL2165

Alternate gene names: NA

Gene position: 2600512-2599226 (Counterclockwise)

Preceding gene: 53719775

Following gene: 53719773

Centisome position: 63.82

GC content: 71.95

Gene sequence:

>1287_bases
TTGGATGGAGCTTGCATGGACGAGTTGACACTCGGGTTGATCGGCGCGGGCGCCGTCGTGGTGGGCGGCGTCGTGGTCTA
CAACGCGTGGCAGGGCGCGAAGGTGCGCCGCAGGATGCCGCGCCCGATGCCGAGCGAGGCGGAGGCCGCCGCACGGCACG
AGCGCGAAGACGACGCGCCTTTCATCGAGCCGGTGCGCCAGCCGGCGCGCCGCGACGCGGCGGCGGGCGCCGCGTCGGCG
GGCGCGGTGGGCGGCGATGCGGTGCGCGTCGAGCCGACGTTCGGCGGCGGCGCGGCGCCCGCCGATACGCCGGCCGATCT
TCAGGCCGAGGCGAGCGTCGCGAACGGCGCGCTCGAGCCGGCCGCCGAGGCCGCGCATGGCGGCGAAGCGGCCGTCGCGG
CCGATGCCGCGCGCGACGAGCCGCTCGAGCCGGTGCTGCCCGCCGCGACGACGATTTCCGCGGCGCCGCCGGCGGTCGTC
GATCGCCGGATCGACTGCATCGTGCCGATCCGCCTCGCGAGCCCGCTCGCGGGCGACAAGATCCTGCCCGCCGCGCAGCG
GCTGCGCCGCGCGGGCAGCAAGCCGGTGCACATCGAGGGCAAGCCCGACGGCGGCGATGCATGGGAGCTGCTGCAAAACG
GCGTGCGCTACGACGAGCTGCGCGCGGCCGCGCAGCTCGCGAACCGCAGCGGCCCGCTCAACGAGCTCGAGTTCTCCGAG
TTCGTGACGGGCGTGCAGCAGTTCGCGGACGCGATCGACGGCGCGCCGGAGTTCCCGGACATGATGGAAACGGTATCGAT
GGCGCGCGAGCTCGACGGCTTCGCCGCCCAATGCGACGCGCAACTGTCGATCAACGTGATGTCGGACGGCGCGCCGTGGT
CGGCCAATTACGTGCAGGCGGTCGCGTCGCAGGACGGGCTGCTGCTGTCGCGCGACGGCACGCGCTTCGTGAAGCTCGAC
GCGAAGCAGAACCCCGTCTTCATGCTGCAGTTCGGCGATACGAACTTCCTGCGCGACGATCTCACGTACAAGGGCGGCAA
CCTGATCACGCTCGTGCTCGACGTGCCGGTGGCCGACGAGGACATCCTGCCGTTCCGGCTGATGTGCGATTACGCGAAAT
CGCTGTCCGAGCGCATCGGCGCACGCGTCGTCGACGATCAGCGCCGGCCGCTGCCCGAATCGACGCTGCTCGCGATCGAG
CAGCAACTGATGAAGCTGTACGCGCGGCTCGAGGAGGCCGGCATTCCGGCCGGCTCGCCCGTCACGCGGCGGCTGTTCAG
TCAGTAG

Upstream 100 bases:

>100_bases
CATGGAAACGGCCGCGGGTTTTGCCCAGAATTGACGTATGACGAATGGCACGCGGGCGCGCGGCGCATCGGCGCCCGTCC
GCGAGTCCGATGACACGGAA

Downstream 100 bases:

>100_bases
GCGCCGCCGGGCGCGCGGGTTTCGCCGCGGCGCGGCCTTGCCCGAACGTGCGCGGGCAGCGGCTTGCGCTTGCGTTGCCG
CGCCGCATCATCCGGACCGC

Product: hypothetical protein

Products: NA

Alternate protein names: Protein ZipA; Transmembrane Protein; ZipA Related Protein Possibly Involved In; Chromosome Segregation Protein Smc

Number of amino acids: Translated: 428; Mature: 428

Protein sequence:

>428_residues
MDGACMDELTLGLIGAGAVVVGGVVVYNAWQGAKVRRRMPRPMPSEAEAAARHEREDDAPFIEPVRQPARRDAAAGAASA
GAVGGDAVRVEPTFGGGAAPADTPADLQAEASVANGALEPAAEAAHGGEAAVAADAARDEPLEPVLPAATTISAAPPAVV
DRRIDCIVPIRLASPLAGDKILPAAQRLRRAGSKPVHIEGKPDGGDAWELLQNGVRYDELRAAAQLANRSGPLNELEFSE
FVTGVQQFADAIDGAPEFPDMMETVSMARELDGFAAQCDAQLSINVMSDGAPWSANYVQAVASQDGLLLSRDGTRFVKLD
AKQNPVFMLQFGDTNFLRDDLTYKGGNLITLVLDVPVADEDILPFRLMCDYAKSLSERIGARVVDDQRRPLPESTLLAIE
QQLMKLYARLEEAGIPAGSPVTRRLFSQ

Sequences:

>Translated_428_residues
MDGACMDELTLGLIGAGAVVVGGVVVYNAWQGAKVRRRMPRPMPSEAEAAARHEREDDAPFIEPVRQPARRDAAAGAASA
GAVGGDAVRVEPTFGGGAAPADTPADLQAEASVANGALEPAAEAAHGGEAAVAADAARDEPLEPVLPAATTISAAPPAVV
DRRIDCIVPIRLASPLAGDKILPAAQRLRRAGSKPVHIEGKPDGGDAWELLQNGVRYDELRAAAQLANRSGPLNELEFSE
FVTGVQQFADAIDGAPEFPDMMETVSMARELDGFAAQCDAQLSINVMSDGAPWSANYVQAVASQDGLLLSRDGTRFVKLD
AKQNPVFMLQFGDTNFLRDDLTYKGGNLITLVLDVPVADEDILPFRLMCDYAKSLSERIGARVVDDQRRPLPESTLLAIE
QQLMKLYARLEEAGIPAGSPVTRRLFSQ
>Mature_428_residues
MDGACMDELTLGLIGAGAVVVGGVVVYNAWQGAKVRRRMPRPMPSEAEAAARHEREDDAPFIEPVRQPARRDAAAGAASA
GAVGGDAVRVEPTFGGGAAPADTPADLQAEASVANGALEPAAEAAHGGEAAVAADAARDEPLEPVLPAATTISAAPPAVV
DRRIDCIVPIRLASPLAGDKILPAAQRLRRAGSKPVHIEGKPDGGDAWELLQNGVRYDELRAAAQLANRSGPLNELEFSE
FVTGVQQFADAIDGAPEFPDMMETVSMARELDGFAAQCDAQLSINVMSDGAPWSANYVQAVASQDGLLLSRDGTRFVKLD
AKQNPVFMLQFGDTNFLRDDLTYKGGNLITLVLDVPVADEDILPFRLMCDYAKSLSERIGARVVDDQRRPLPESTLLAIE
QQLMKLYARLEEAGIPAGSPVTRRLFSQ

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 45326; Mature: 45326

Theoretical pI: Translated: 4.39; Mature: 4.39

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
3.5 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
3.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDGACMDELTLGLIGAGAVVVGGVVVYNAWQGAKVRRRMPRPMPSEAEAAARHEREDDAP
CCCCHHHHHHHHHHHHHHHHHCCEEEEECCCCCHHHHHCCCCCCCHHHHHHHHCCCCCCH
FIEPVRQPARRDAAAGAASAGAVGGDAVRVEPTFGGGAAPADTPADLQAEASVANGALEP
HHHHHHHHHHHHHHCCCCCCCCCCCCEEEEEECCCCCCCCCCCCCCCHHHHHHHCCCCCH
AAEAAHGGEAAVAADAARDEPLEPVLPAATTISAAPPAVVDRRIDCIVPIRLASPLAGDK
HHHHCCCCCCEEECCCCCCCCCCCCCCCHHCCCCCCCHHHHCCCCEEEEEHHCCCCCCCC
ILPAAQRLRRAGSKPVHIEGKPDGGDAWELLQNGVRYDELRAAAQLANRSGPLNELEFSE
CCHHHHHHHHCCCCCEEEECCCCCCHHHHHHHCCCCHHHHHHHHHHHHCCCCCCHHHHHH
FVTGVQQFADAIDGAPEFPDMMETVSMARELDGFAAQCDAQLSINVMSDGAPWSANYVQA
HHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCHHHCCCCEEEEEEECCCCCCCHHHHHH
VASQDGLLLSRDGTRFVKLDAKQNPVFMLQFGDTNFLRDDLTYKGGNLITLVLDVPVADE
HHCCCCEEEECCCCEEEEEECCCCCEEEEEECCCCHHHCCCEECCCCEEEEEEECCCCCC
DILPFRLMCDYAKSLSERIGARVVDDQRRPLPESTLLAIEQQLMKLYARLEEAGIPAGSP
CCCHHHHHHHHHHHHHHHHCCEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCH
VTRRLFSQ
HHHHHHCC
>Mature Secondary Structure
MDGACMDELTLGLIGAGAVVVGGVVVYNAWQGAKVRRRMPRPMPSEAEAAARHEREDDAP
CCCCHHHHHHHHHHHHHHHHHCCEEEEECCCCCHHHHHCCCCCCCHHHHHHHHCCCCCCH
FIEPVRQPARRDAAAGAASAGAVGGDAVRVEPTFGGGAAPADTPADLQAEASVANGALEP
HHHHHHHHHHHHHHCCCCCCCCCCCCEEEEEECCCCCCCCCCCCCCCHHHHHHHCCCCCH
AAEAAHGGEAAVAADAARDEPLEPVLPAATTISAAPPAVVDRRIDCIVPIRLASPLAGDK
HHHHCCCCCCEEECCCCCCCCCCCCCCCHHCCCCCCCHHHHCCCCEEEEEHHCCCCCCCC
ILPAAQRLRRAGSKPVHIEGKPDGGDAWELLQNGVRYDELRAAAQLANRSGPLNELEFSE
CCHHHHHHHHCCCCCEEEECCCCCCHHHHHHHCCCCHHHHHHHHHHHHCCCCCCHHHHHH
FVTGVQQFADAIDGAPEFPDMMETVSMARELDGFAAQCDAQLSINVMSDGAPWSANYVQA
HHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCHHHCCCCEEEEEEECCCCCCCHHHHHH
VASQDGLLLSRDGTRFVKLDAKQNPVFMLQFGDTNFLRDDLTYKGGNLITLVLDVPVADE
HHCCCCEEEECCCCEEEEEECCCCCEEEEEECCCCHHHCCCEECCCCEEEEEEECCCCCC
DILPFRLMCDYAKSLSERIGARVVDDQRRPLPESTLLAIEQQLMKLYARLEEAGIPAGSP
CCCHHHHHHHHHHHHHHHHCCEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCH
VTRRLFSQ
HHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA