| Definition | Burkholderia pseudomallei K96243 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_006350 |
| Length | 4,074,542 |
Click here to switch to the map view.
The map label for this gene is ppsA [H]
Identifier: 53719749
GI number: 53719749
Start: 2566768
End: 2569167
Strand: Reverse
Name: ppsA [H]
Synonym: BPSL2140
Alternate gene names: 53719749
Gene position: 2569167-2566768 (Counterclockwise)
Preceding gene: 53719750
Following gene: 53719748
Centisome position: 63.05
GC content: 65.04
Gene sequence:
>2400_bases ATGACTAACGCAGCAAACGTCGCAAAGGATCAGGCGTATGTAATTCCGTTCGAGCAGTTGCGAATGACCGATGTCGAAAT CGTCGGCGGCAAGAATGCGTCGCTCGGCGAGATGATCAGCCAGTTGGCCGAGGCAGGCGTGCGCGTGCCCACCGGTTTCG CGACGACCGCGCTCGCATTCCGCGATTTTCTCCAGCACAACAACCTCACCGAACGCATCGCGCAACGTCTCGAGTCGCTC GACATCGACGACGTGAAGGCGCTCGCCGAAGCCGGCGCCGAGATCCGCAAGTGGATCGTCGACGCGCCGCTGCAGCCGCG CCTCGAGCAGGAAATCCGCGCGCAGTTCGAGATCCTGAAGAACGGCTCGCCGGGCGAGCTGTCGTTCGCCGTGCGCTCGT CCGCGACCGCGGAGGACTTGCCCGACGCATCGTTCGCCGGTCAGCAGGAGTCGTATCTGAACGTCGTCGGCATCGAGGAC GTGCTCGACCGCATGAAGCACGTGTTCGCGTCGCTGTACAACGATCGCGCGATCTCGTACCGCGTGCACAAGGGCTTCAC GCACGCCGAGGTCGCGTTGTCGGCCGGCGTGCAGCGGATGGTGCGCTCGGACGTCGGCGCGGCCGGCGTGATGTTCACGA TCGACACCGAATCGGGCTTCAAGGACGCCGTGTTCATCACCGCGAGCTACGGCCTGGGCGAAACCGTCGTGCAGGGCGCG GTGAATCCGGACGAGTTCTATGTGTTCAAGACGACGCTCGCACAGGACAAGTACCCGATCATCCGCCGCTCGATCGGCTC GAAGCTGATCAAGATGGAATTCACGCAGCCGGGCGAGCCGGGCCGCGTGAAGACGGTCGACGTGCCGCACGAGCAGCGCA ACCGCTATTCGATCACCGACGACGACGTGATCGAGCTCGCGAAGTACGCGGTCATCATCGAGAAGCACTACCAGCGTCCG ATGGACATCGAGTGGGGCAAGGACGGCCGCGACGGCAAGATCTTCATCCTGCAGGCGCGTCCCGAAACGGTGAAGAGCCA GGCGCACGGCAAGGTCGAGCAGCGCTTCAAGCTGAAGGGCCAGTCGCAGGTGCTCGCGACGGGCCGCGCGATCGGCCAGA AGATCGGCGCGGGCCCCGTGCGCGTGATCCACGATCCGTCGGAGATGGAGCGTGTGCAGCCGGGCGACGTGCTCGTCGCC GACATGACCGACCCGAACTGGGAGCCGGTGATGAAGCGGGCGTCGGCGATCGTCACGAACCGCGGCGGGCGCACCTGCCA TGCGGCGATCATCGCGCGCGAGCTCGGCGTGCCGGCGGTGGTCGGCTGCGGCGACGCGACCGACGTGCTGAAGGACGGCG CGCTCGTCACGGTGTCGTGCGCGGAGGGCGACGAGGGCAAGATCTACGACGGCCTGCTCGAAACCGAAGTGTCCGAGGTG CAGCGCGGCGAGCTGCCGAGCGTGCCGGTCAAGATCATGATGAACGTCGGCAACCCGCAGCTCGCGTTCGACTTCTCGCA GTTGCCGAACGCGGGCGTCGGCCTCGCGCGCCTCGAGTTCATCATCAACAACAACATCGGCGTGCATCCGAAGGCGATCC TCGAGTACCCGAACGTCGACGCCGACCTGAAGAAGGCGGTCGAGAGCGTCGCGCGCGGCCACGCGTCGCCGCGGGCGTTC TATGTGGACAAGCTGACGGAAGGCATCGCGACGATCGCGGCGGCGTTCTATCCGAAGCCCGTGATCGTGCGTCTGTCCGA CTTCAAGTCGAACGAGTACAAGAAGCTGATCGGCGGCTCGCGCTACGAGCCGGATGAGGAAAACCCGATGCTGGGTTTCC GCGGCGCGTCGCGCTACATCGCCGAGGATTTCGCGCAGGCGTTCGAGATGGAGTGCATGGCGCTCAAGCGCGTTCGCGAC GAAATGGGCCTGACCAACGTCGAGATCATGGTGCCGTTCGTGCGCACCGTGAAGCAGGCGGAGCGTGTGGTCGGCCTGCT CGGGAAGTTCGGCCTGAAGCGCGGCGACAACGGCCTGCGTCTCATCATGATGTGCGAAGTGCCGTCGAACGCGATCCTCG CCGAGGAGTTCCTGCAGCACTTCGACGGCTTCTCGATCGGCTCGAACGACCTCACGCAGCTGACGCTCGGCCTCGACCGC GATTCGGGCATGGAACTGCTCGCCGTCGATTTCGACGAACGCGATCCGGCCGTGAAGTTCATGTTGAAGCGCGCGATCGA CACGTGTCGCAAGCTCGACAAGTACGTGGGCATCTGCGGTCAGGGCCCGTCCGATCACCCGGATTTCGCGAAGTGGCTCG CCGACGAAGGCATCGCGTCGATCTCGCTGAATCCGGACACGGTCATCGAGACGTGGCAGGCGCTCGCCGCGAAGCAGTAA
Upstream 100 bases:
>100_bases TTATCCGACAGGTTGTGCAATGCGCGTCCCGCCTTTTGCAGGCGGCCGCGCTCCGAGCCCGTTGCACGATCGAGCATTTT TTTCACACTTAGGGGCTTGT
Downstream 100 bases:
>100_bases TCCGCGGTAATCGCCGGTCCGGACGGGAATTGCCCGATTGCCGCCCGGATGAAGGCGAATTGCAAGGTTCGTGCTATAAA CACCCCGGTAACACCGGGGT
Product: phosphoenolpyruvate synthase
Products: NA
Alternate protein names: PEP synthase; Pyruvate, water dikinase [H]
Number of amino acids: Translated: 799; Mature: 798
Protein sequence:
>799_residues MTNAANVAKDQAYVIPFEQLRMTDVEIVGGKNASLGEMISQLAEAGVRVPTGFATTALAFRDFLQHNNLTERIAQRLESL DIDDVKALAEAGAEIRKWIVDAPLQPRLEQEIRAQFEILKNGSPGELSFAVRSSATAEDLPDASFAGQQESYLNVVGIED VLDRMKHVFASLYNDRAISYRVHKGFTHAEVALSAGVQRMVRSDVGAAGVMFTIDTESGFKDAVFITASYGLGETVVQGA VNPDEFYVFKTTLAQDKYPIIRRSIGSKLIKMEFTQPGEPGRVKTVDVPHEQRNRYSITDDDVIELAKYAVIIEKHYQRP MDIEWGKDGRDGKIFILQARPETVKSQAHGKVEQRFKLKGQSQVLATGRAIGQKIGAGPVRVIHDPSEMERVQPGDVLVA DMTDPNWEPVMKRASAIVTNRGGRTCHAAIIARELGVPAVVGCGDATDVLKDGALVTVSCAEGDEGKIYDGLLETEVSEV QRGELPSVPVKIMMNVGNPQLAFDFSQLPNAGVGLARLEFIINNNIGVHPKAILEYPNVDADLKKAVESVARGHASPRAF YVDKLTEGIATIAAAFYPKPVIVRLSDFKSNEYKKLIGGSRYEPDEENPMLGFRGASRYIAEDFAQAFEMECMALKRVRD EMGLTNVEIMVPFVRTVKQAERVVGLLGKFGLKRGDNGLRLIMMCEVPSNAILAEEFLQHFDGFSIGSNDLTQLTLGLDR DSGMELLAVDFDERDPAVKFMLKRAIDTCRKLDKYVGICGQGPSDHPDFAKWLADEGIASISLNPDTVIETWQALAAKQ
Sequences:
>Translated_799_residues MTNAANVAKDQAYVIPFEQLRMTDVEIVGGKNASLGEMISQLAEAGVRVPTGFATTALAFRDFLQHNNLTERIAQRLESL DIDDVKALAEAGAEIRKWIVDAPLQPRLEQEIRAQFEILKNGSPGELSFAVRSSATAEDLPDASFAGQQESYLNVVGIED VLDRMKHVFASLYNDRAISYRVHKGFTHAEVALSAGVQRMVRSDVGAAGVMFTIDTESGFKDAVFITASYGLGETVVQGA VNPDEFYVFKTTLAQDKYPIIRRSIGSKLIKMEFTQPGEPGRVKTVDVPHEQRNRYSITDDDVIELAKYAVIIEKHYQRP MDIEWGKDGRDGKIFILQARPETVKSQAHGKVEQRFKLKGQSQVLATGRAIGQKIGAGPVRVIHDPSEMERVQPGDVLVA DMTDPNWEPVMKRASAIVTNRGGRTCHAAIIARELGVPAVVGCGDATDVLKDGALVTVSCAEGDEGKIYDGLLETEVSEV QRGELPSVPVKIMMNVGNPQLAFDFSQLPNAGVGLARLEFIINNNIGVHPKAILEYPNVDADLKKAVESVARGHASPRAF YVDKLTEGIATIAAAFYPKPVIVRLSDFKSNEYKKLIGGSRYEPDEENPMLGFRGASRYIAEDFAQAFEMECMALKRVRD EMGLTNVEIMVPFVRTVKQAERVVGLLGKFGLKRGDNGLRLIMMCEVPSNAILAEEFLQHFDGFSIGSNDLTQLTLGLDR DSGMELLAVDFDERDPAVKFMLKRAIDTCRKLDKYVGICGQGPSDHPDFAKWLADEGIASISLNPDTVIETWQALAAKQ >Mature_798_residues TNAANVAKDQAYVIPFEQLRMTDVEIVGGKNASLGEMISQLAEAGVRVPTGFATTALAFRDFLQHNNLTERIAQRLESLD IDDVKALAEAGAEIRKWIVDAPLQPRLEQEIRAQFEILKNGSPGELSFAVRSSATAEDLPDASFAGQQESYLNVVGIEDV LDRMKHVFASLYNDRAISYRVHKGFTHAEVALSAGVQRMVRSDVGAAGVMFTIDTESGFKDAVFITASYGLGETVVQGAV NPDEFYVFKTTLAQDKYPIIRRSIGSKLIKMEFTQPGEPGRVKTVDVPHEQRNRYSITDDDVIELAKYAVIIEKHYQRPM DIEWGKDGRDGKIFILQARPETVKSQAHGKVEQRFKLKGQSQVLATGRAIGQKIGAGPVRVIHDPSEMERVQPGDVLVAD MTDPNWEPVMKRASAIVTNRGGRTCHAAIIARELGVPAVVGCGDATDVLKDGALVTVSCAEGDEGKIYDGLLETEVSEVQ RGELPSVPVKIMMNVGNPQLAFDFSQLPNAGVGLARLEFIINNNIGVHPKAILEYPNVDADLKKAVESVARGHASPRAFY VDKLTEGIATIAAAFYPKPVIVRLSDFKSNEYKKLIGGSRYEPDEENPMLGFRGASRYIAEDFAQAFEMECMALKRVRDE MGLTNVEIMVPFVRTVKQAERVVGLLGKFGLKRGDNGLRLIMMCEVPSNAILAEEFLQHFDGFSIGSNDLTQLTLGLDRD SGMELLAVDFDERDPAVKFMLKRAIDTCRKLDKYVGICGQGPSDHPDFAKWLADEGIASISLNPDTVIETWQALAAKQ
Specific function: Catalyzes the phosphorylation of pyruvate to phosphoenolpyruvate [H]
COG id: COG0574
COG function: function code G; Phosphoenolpyruvate synthase/pyruvate phosphate dikinase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the PEP-utilizing enzyme family [H]
Homologues:
Organism=Escherichia coli, GI1787994, Length=784, Percent_Identity=65.0510204081633, Blast_Score=1048, Evalue=0.0, Organism=Escherichia coli, GI1788756, Length=399, Percent_Identity=24.5614035087719, Blast_Score=96, Evalue=6e-21, Organism=Escherichia coli, GI1788726, Length=192, Percent_Identity=32.2916666666667, Blast_Score=87, Evalue=4e-18, Organism=Escherichia coli, GI48994992, Length=406, Percent_Identity=24.6305418719212, Blast_Score=77, Evalue=5e-15, Organism=Caenorhabditis elegans, GI17564524, Length=237, Percent_Identity=31.6455696202532, Blast_Score=100, Evalue=5e-21,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR013815 - InterPro: IPR013816 - InterPro: IPR008279 - InterPro: IPR006319 - InterPro: IPR018274 - InterPro: IPR023151 - InterPro: IPR000121 - InterPro: IPR002192 - InterPro: IPR015813 [H]
Pfam domain/function: PF00391 PEP-utilizers; PF02896 PEP-utilizers_C; PF01326 PPDK_N [H]
EC number: =2.7.9.2 [H]
Molecular weight: Translated: 87770; Mature: 87639
Theoretical pI: Translated: 5.10; Mature: 5.10
Prosite motif: PS00370 PEP_ENZYMES_PHOS_SITE ; PS00742 PEP_ENZYMES_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 2.8 %Met (Translated Protein) 3.6 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 3.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTNAANVAKDQAYVIPFEQLRMTDVEIVGGKNASLGEMISQLAEAGVRVPTGFATTALAF CCCCCCCCCCCEEEEEHHHHCEEEEEEECCCCCCHHHHHHHHHHCCCCCCCCHHHHHHHH RDFLQHNNLTERIAQRLESLDIDDVKALAEAGAEIRKWIVDAPLQPRLEQEIRAQFEILK HHHHHCCCHHHHHHHHHHHCCHHHHHHHHHCCHHHHHHHHCCCCCCHHHHHHHHHHHHHC NGSPGELSFAVRSSATAEDLPDASFAGQQESYLNVVGIEDVLDRMKHVFASLYNDRAISY CCCCCCEEEEEECCCCHHCCCCCCCCCCCCCCEEEECHHHHHHHHHHHHHHHHCCCEEEE RVHKGFTHAEVALSAGVQRMVRSDVGAAGVMFTIDTESGFKDAVFITASYGLGETVVQGA EECCCCCHHHHHHHHHHHHHHHHCCCCCEEEEEEECCCCCCCEEEEEEECCCCHHHHHCC VNPDEFYVFKTTLAQDKYPIIRRSIGSKLIKMEFTQPGEPGRVKTVDVPHEQRNRYSITD CCCCCEEEEEEECCCCCCHHHHHHHCCCEEEEECCCCCCCCCEEEEECCHHHCCCCCCCC DDVIELAKYAVIIEKHYQRPMDIEWGKDGRDGKIFILQARPETVKSQAHGKVEQRFKLKG HHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCEEEEEECCCHHHHHHHCCCHHHHHHCCC QSQVLATGRAIGQKIGAGPVRVIHDPSEMERVQPGDVLVADMTDPNWEPVMKRASAIVTN CHHHHHHHHHHHHHCCCCCEEEEECCHHHHCCCCCCEEEEECCCCCHHHHHHHHHHHHCC RGGRTCHAAIIARELGVPAVVGCGDATDVLKDGALVTVSCAEGDEGKIYDGLLETEVSEV CCCCCHHHHHHHHHCCCCEEEECCCHHHHHCCCCEEEEEECCCCCCCEEHHHHHHHHHHH QRGELPSVPVKIMMNVGNPQLAFDFSQLPNAGVGLARLEFIINNNIGVHPKAILEYPNVD HCCCCCCCCEEEEEECCCCCEEEEHHHCCCCCCCHHEEEEEECCCCCCCCHHHEECCCCC ADLKKAVESVARGHASPRAFYVDKLTEGIATIAAAFYPKPVIVRLSDFKSNEYKKLIGGS HHHHHHHHHHHCCCCCCCEEEHHHHHHHHHHHHHHHCCCCEEEEEECCCCCHHHHHHCCC RYEPDEENPMLGFRGASRYIAEDFAQAFEMECMALKRVRDEMGLTNVEIMVPFVRTVKQA CCCCCCCCCEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEHHHHHHHHHHH ERVVGLLGKFGLKRGDNGLRLIMMCEVPSNAILAEEFLQHFDGFSIGSNDLTQLTLGLDR HHHHHHHHHHCCCCCCCCEEEEEEEECCCCHHHHHHHHHHCCCCCCCCCCCEEEEEECCC DSGMELLAVDFDERDPAVKFMLKRAIDTCRKLDKYVGICGQGPSDHPDFAKWLADEGIAS CCCCEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHEECCCCCCCCHHHHHHHHHCCCEE ISLNPDTVIETWQALAAKQ EECCCHHHHHHHHHHHCCC >Mature Secondary Structure TNAANVAKDQAYVIPFEQLRMTDVEIVGGKNASLGEMISQLAEAGVRVPTGFATTALAF CCCCCCCCCCEEEEEHHHHCEEEEEEECCCCCCHHHHHHHHHHCCCCCCCCHHHHHHHH RDFLQHNNLTERIAQRLESLDIDDVKALAEAGAEIRKWIVDAPLQPRLEQEIRAQFEILK HHHHHCCCHHHHHHHHHHHCCHHHHHHHHHCCHHHHHHHHCCCCCCHHHHHHHHHHHHHC NGSPGELSFAVRSSATAEDLPDASFAGQQESYLNVVGIEDVLDRMKHVFASLYNDRAISY CCCCCCEEEEEECCCCHHCCCCCCCCCCCCCCEEEECHHHHHHHHHHHHHHHHCCCEEEE RVHKGFTHAEVALSAGVQRMVRSDVGAAGVMFTIDTESGFKDAVFITASYGLGETVVQGA EECCCCCHHHHHHHHHHHHHHHHCCCCCEEEEEEECCCCCCCEEEEEEECCCCHHHHHCC VNPDEFYVFKTTLAQDKYPIIRRSIGSKLIKMEFTQPGEPGRVKTVDVPHEQRNRYSITD CCCCCEEEEEEECCCCCCHHHHHHHCCCEEEEECCCCCCCCCEEEEECCHHHCCCCCCCC DDVIELAKYAVIIEKHYQRPMDIEWGKDGRDGKIFILQARPETVKSQAHGKVEQRFKLKG HHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCEEEEEECCCHHHHHHHCCCHHHHHHCCC QSQVLATGRAIGQKIGAGPVRVIHDPSEMERVQPGDVLVADMTDPNWEPVMKRASAIVTN CHHHHHHHHHHHHHCCCCCEEEEECCHHHHCCCCCCEEEEECCCCCHHHHHHHHHHHHCC RGGRTCHAAIIARELGVPAVVGCGDATDVLKDGALVTVSCAEGDEGKIYDGLLETEVSEV CCCCCHHHHHHHHHCCCCEEEECCCHHHHHCCCCEEEEEECCCCCCCEEHHHHHHHHHHH QRGELPSVPVKIMMNVGNPQLAFDFSQLPNAGVGLARLEFIINNNIGVHPKAILEYPNVD HCCCCCCCCEEEEEECCCCCEEEEHHHCCCCCCCHHEEEEEECCCCCCCCHHHEECCCCC ADLKKAVESVARGHASPRAFYVDKLTEGIATIAAAFYPKPVIVRLSDFKSNEYKKLIGGS HHHHHHHHHHHCCCCCCCEEEHHHHHHHHHHHHHHHCCCCEEEEEECCCCCHHHHHHCCC RYEPDEENPMLGFRGASRYIAEDFAQAFEMECMALKRVRDEMGLTNVEIMVPFVRTVKQA CCCCCCCCCEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEHHHHHHHHHHH ERVVGLLGKFGLKRGDNGLRLIMMCEVPSNAILAEEFLQHFDGFSIGSNDLTQLTLGLDR HHHHHHHHHHCCCCCCCCEEEEEEEECCCCHHHHHHHHHHCCCCCCCCCCCEEEEEECCC DSGMELLAVDFDERDPAVKFMLKRAIDTCRKLDKYVGICGQGPSDHPDFAKWLADEGIAS CCCCEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHEECCCCCCCCHHHHHHHHHCCCEE ISLNPDTVIETWQALAAKQ EECCCHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 10710307 [H]