| Definition | Burkholderia pseudomallei K96243 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_006350 |
| Length | 4,074,542 |
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The map label for this gene is hyuE [H]
Identifier: 53719730
GI number: 53719730
Start: 2545542
End: 2546516
Strand: Reverse
Name: hyuE [H]
Synonym: BPSL2119
Alternate gene names: 53719730
Gene position: 2546516-2545542 (Counterclockwise)
Preceding gene: 53719731
Following gene: 53719729
Centisome position: 62.5
GC content: 73.13
Gene sequence:
>975_bases ATGAAAATAAAGCTGATCAATCCGAACACGACGCGGCGGATGACCGACGCGATGGGCCGTTGCGCGCGCGAGGTCGCGTC GGCGGGCACGGCGATCGTCGCCGTGAGCCCGGCGATGGGGCCGCCGTCGATCGAAGGCTATTACGACGAGGCGCTCGCGA CGCCCGGCCTGCTCGCCGAAGTCGCGGCGGGCGAGCGCGACGGCTTCGACGGCTACGTGATCGCGTGCTTCGGCGATCCG GGGTTGTATGCGGCGCGCGAACTCGCGCGCGGGCCCGTGATCGGCATCGCGGAGGCGGCGATGCATGCGGCGAGCGTGCT CGCGCCGGGCTTTTCCGTCGTGACGACGCTCGCGCGCACCTGCGCGATGGCGTGGCATCTCGCCGAGCGTTACGGGATGA AGCGGTTCTGCCGCAACGTGCGCGCGACCGACGTCGCGGTGCTCGATCTCGACCGGCCCGGCTCCGCGGCACGGCGCGTG ATCGTCGACGAATGCCGGCGCGCGCTGGACGAGGACGGCGCGGACGCGATCGTGCTCGGCTGCGCGGGCATGGCCGAGTT CGCGCACGAGATCGAGGCGGCGATCGGCGCGCCCGTCGTCGAGGGCGTGACGGCCGCGGTCAAATGGACGGAGGCGCTGA TCGCGCTGAAGCTCGCGACCGCGAAGCGCGGCGATTTCGCGCGGCCGCTTGCGAAGCGCTACGACGGCGAGTTCGCGCGC TTTAGCCCGGACGGCGCGTTCGCGCGCGAGGCCGCGGCGGCGGGTGCCGCCGGTGCCCCAGCAGCCTCAGCGGCCCCAGC GGCCCCAGCGGCCTCAGCGGCCTCAGCGGCCTCAGCGGTCCCAGCGGTCCCAGCGGTCCCAGCGACTTCAGCGACTTCGG CGGCCCCAGCGACTTCGGCGGCGGGATCGGACGCCGCGCCGCCCGCCGCGCCGGCCACCGGCGTTTTTCCGCAAGCGCAC ATACATTCCGTCTGA
Upstream 100 bases:
>100_bases GCGCCCGCGCTGTCCGGGCTCGCGAATTTCTCGTGGTTCATCGGCGCGGCGCTCGGCGGCGCGTTCTATCGCGCGCTCGC GAAAGCATGACGGAGTCCCC
Downstream 100 bases:
>100_bases CATGCACTATCCGTGTGCCCGTATGGGCGCTCAGGGGTGTTTTCGCTACACTGGGCCATCCGTCGCTTCGGCCGCGCGGC CCCGGTTTCCGGGCTTCGCG
Product: putative amino acid racemase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 324; Mature: 324
Protein sequence:
>324_residues MKIKLINPNTTRRMTDAMGRCAREVASAGTAIVAVSPAMGPPSIEGYYDEALATPGLLAEVAAGERDGFDGYVIACFGDP GLYAARELARGPVIGIAEAAMHAASVLAPGFSVVTTLARTCAMAWHLAERYGMKRFCRNVRATDVAVLDLDRPGSAARRV IVDECRRALDEDGADAIVLGCAGMAEFAHEIEAAIGAPVVEGVTAAVKWTEALIALKLATAKRGDFARPLAKRYDGEFAR FSPDGAFAREAAAAGAAGAPAASAAPAAPAASAASAASAVPAVPAVPATSATSAAPATSAAGSDAAPPAAPATGVFPQAH IHSV
Sequences:
>Translated_324_residues MKIKLINPNTTRRMTDAMGRCAREVASAGTAIVAVSPAMGPPSIEGYYDEALATPGLLAEVAAGERDGFDGYVIACFGDP GLYAARELARGPVIGIAEAAMHAASVLAPGFSVVTTLARTCAMAWHLAERYGMKRFCRNVRATDVAVLDLDRPGSAARRV IVDECRRALDEDGADAIVLGCAGMAEFAHEIEAAIGAPVVEGVTAAVKWTEALIALKLATAKRGDFARPLAKRYDGEFAR FSPDGAFAREAAAAGAAGAPAASAAPAAPAASAASAASAVPAVPAVPATSATSAAPATSAAGSDAAPPAAPATGVFPQAH IHSV >Mature_324_residues MKIKLINPNTTRRMTDAMGRCAREVASAGTAIVAVSPAMGPPSIEGYYDEALATPGLLAEVAAGERDGFDGYVIACFGDP GLYAARELARGPVIGIAEAAMHAASVLAPGFSVVTTLARTCAMAWHLAERYGMKRFCRNVRATDVAVLDLDRPGSAARRV IVDECRRALDEDGADAIVLGCAGMAEFAHEIEAAIGAPVVEGVTAAVKWTEALIALKLATAKRGDFARPLAKRYDGEFAR FSPDGAFAREAAAAGAAGAPAASAAPAAPAASAASAASAVPAVPAVPATSATSAAPATSAAGSDAAPPAAPATGVFPQAH IHSV
Specific function: Responsible for racemization of the D-5-substituted hydantoins to their corresponding L-amino acids [H]
COG id: COG4126
COG function: function code E; Hydantoin racemase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: To yeast DCG1 and S.pombe SPAC1F7.10 [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR015942 [H]
Pfam domain/function: PF01177 Asp_Glu_race [H]
EC number: =5.1.99.5 [H]
Molecular weight: Translated: 32636; Mature: 32636
Theoretical pI: Translated: 6.04; Mature: 6.04
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.9 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 4.3 %Cys+Met (Translated Protein) 1.9 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 4.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKIKLINPNTTRRMTDAMGRCAREVASAGTAIVAVSPAMGPPSIEGYYDEALATPGLLAE CEEEEECCCCHHHHHHHHHHHHHHHHHCCCEEEEECCCCCCCCCCCHHHHHHCCCCHHHH VAAGERDGFDGYVIACFGDPGLYAARELARGPVIGIAEAAMHAASVLAPGFSVVTTLART HHCCCCCCCCCEEEEEECCCCHHHHHHHHCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHH CAMAWHLAERYGMKRFCRNVRATDVAVLDLDRPGSAARRVIVDECRRALDEDGADAIVLG HHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCCHHHHHHHHHHHHHHHCCCCCCEEEEE CAGMAEFAHEIEAAIGAPVVEGVTAAVKWTEALIALKLATAKRGDFARPLAKRYDGEFAR CHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHCCCCEEE FSPDGAFAREAAAAGAAGAPAASAAPAAPAASAASAASAVPAVPAVPATSATSAAPATSA ECCCCHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHCCCCCCCCCCCCCCCCCCCCCC AGSDAAPPAAPATGVFPQAHIHSV CCCCCCCCCCCCCCCCCCHHHCCC >Mature Secondary Structure MKIKLINPNTTRRMTDAMGRCAREVASAGTAIVAVSPAMGPPSIEGYYDEALATPGLLAE CEEEEECCCCHHHHHHHHHHHHHHHHHCCCEEEEECCCCCCCCCCCHHHHHHCCCCHHHH VAAGERDGFDGYVIACFGDPGLYAARELARGPVIGIAEAAMHAASVLAPGFSVVTTLART HHCCCCCCCCCEEEEEECCCCHHHHHHHHCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHH CAMAWHLAERYGMKRFCRNVRATDVAVLDLDRPGSAARRVIVDECRRALDEDGADAIVLG HHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCCHHHHHHHHHHHHHHHCCCCCCEEEEE CAGMAEFAHEIEAAIGAPVVEGVTAAVKWTEALIALKLATAKRGDFARPLAKRYDGEFAR CHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHCCCCEEE FSPDGAFAREAAAAGAAGAPAASAAPAAPAASAASAASAVPAVPAVPATSATSAAPATSA ECCCCHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHCCCCCCCCCCCCCCCCCCCCCC AGSDAAPPAAPATGVFPQAHIHSV CCCCCCCCCCCCCCCCCCHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 1339422 [H]