Definition Burkholderia pseudomallei K96243 chromosome chromosome 1, complete sequence.
Accession NC_006350
Length 4,074,542

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The map label for this gene is 53719663

Identifier: 53719663

GI number: 53719663

Start: 2451504

End: 2454302

Strand: Reverse

Name: 53719663

Synonym: BPSL2050

Alternate gene names: NA

Gene position: 2454302-2451504 (Counterclockwise)

Preceding gene: 53719666

Following gene: 53719662

Centisome position: 60.24

GC content: 72.42

Gene sequence:

>2799_bases
ATGAGCGTGATCACGCAATTCACGTCGCTTTTCAGCGCTGCCAATTGTCTCTATTGTCTCGACGGTCCGGGCGAAATCGC
GTCGCTGCAGATCGAGCGCTGGGTGGGGCGGGAGACGCTCTCCGAGAACTTCCAGTGGGATGTCTACGCGCTCGCGACCG
ATCCCGGCCTCGACCTCGACGCGATGCTCGGGCAGCGCGTGACGATCCGCACGGCGCTCGCGAACGGCACGAGCGCCGTG
CGCAGCGGGCTCGTGGCGCAGGCCGAGTGCATCGGCTACGACGCCGGCCTCGCGCGCTACTGCCTGCAGCTCGTGCCGTG
GCTCGCCGCGCTCGCGCACGGCCGCGACGAGCGCACGTTCGTGCGGCAGGGCGTCGCCGACGTGCTCGGCGCGGTGTTCG
CGCCGTACGGCGCGATCGCCCGCTGGCGCTTCACCGCGGACGCGAACCAGCGCATCGCGGAACTCGGCGCGCGCGACTAC
CGCGTGCAGTACCGCACCCACACGCATTTCGATTTCGTCCGGCACGTGCTTGCCGAAGCGGGTCTCGGCTTTTGCTTCGT
CGAGGAGGCGGACGCGCCCGCGGGCCACACGATGCTGATCTTCGACGACAGCACGCAGTTGCCCGAGGACGAGACTTCCG
CGCGCATGGGCGGCGTGCCGCAGCGGCTGAGCGGCACGGCGACCGAGCCGGACGACGTGATCGTCGGCATCGGGCGGTCG
CTGTCGCTGACCGCGGATCGCGTCACGCTGATCAGCAGCGACTACCGCGGCAACCAGTCGACGAGCGCGACGGCGAGCCT
CGGCAATCCGGCCGGATCGCGCGAGCTGTACGACGACGTCGGGCCGGAGGCGTTCGACAGCCTGCGCGAGGCCGACGCCG
CCGCGCGGCGGCACGCGGACGCGATCGTCTCGGCGGCGCGCTTCTGGACAGGCTACGGCACGTTGCGCACCGCGCGCGCC
GGCCGCGCGCTGCGCATCGCGGGCGCGACGTGGCGCATGTCGCGCGGCGGCGCGCCGGCGCCCGATGCGTTCGTGTTGAC
GCGCGTCGATCAGATCGGCATCAACAATTTGCCCGCGACGGTGATGGAGCGCGTCGAGCGCAGCCTCGGCCCGCTGCCGC
CCGCGAATCTCGACGCGCGCGTGCTCGCGCAGGCGAAGGCGGGCGGCTATGCGAACCGGTTCGACGCCGCGCCGCGCGAC
CAGGCATGGCGCCCGACGCTGGAGGACGGCACCGGCCAGCGACTGAACCCGGTGCCGACGGCGCTCGGCGCGCAGACGGC
GATCGTCGTCGGGCCGCAGGGCGAGACGCGGCCGGGCTCGACGGGCCCGGTGCATACCGACGCGCAGGGCCGGTTGCGGC
TGCGCTATCACTGGCAGGCGGACGGCGACGCGGGCACCTATCCGACGCGCGCGATGCAGCGGCTCGCGAGCGAGGGGCAC
GGGCTGCAGCAGACGCCGCGGATCGGCCACGAAGTGCTGGTGCAGTTCGTCAACGGCCTCGTGCACCGGCCGATCGTGCT
CGGCGGGCTGTTCAACGGCCGCGGCGAGGGCGGCGAAGCGCCGACGCCCGGCGGCGAAGCGGGGCAGCCGCTCGACGAAT
CGGTCTACGCACAGGCGAGCGACCACGCGGCGAGCGCGCAGGGCAATCTTGCGGGCGGCCATAGCCCCGCGTGGCACGGC
GCGGGCGGCGGCGCGAAGCGCCACGATCACGCGGGCGCGCTGTCCGGCTTCAAGAGCCAGGGGTTCGACGGCCAGGGCTA
CAACCAGCTCGTCGCGGACGATACCGATCGCATGGGCCGCATGCAGATGGCGACGACGCACGCGGCGACCCAGCTCAACA
TCGGCCACTTGCGGCATCAGGCCGACAACTATCTCGGCAGCTTCCGCGGGCAAGGCGTCGAGCTGCGCTCGGACGCGTAC
GGCGCGCTGCGCGGCGCGCGCGGCGTGCTGATCTCCAGCTATGCGCCGACGGGGCCGTCGCAGCCGGCGGGCGATGCGTC
GGCGCTGCAGTCGCTGCTCGCGCAACAGGCGGGGCTCGCGAAGCTTCTCGACAAATCGGCGGACACGCACAAGACCTTGC
CGTTCGCCGCGCAGCGTGGCGCGCAGCGGGCCGGACAGTCGTCGATGAACGGCGACGCCGCGCCGCTCGACGCGCTCGGG
AAGAGTTTCGCGACGACGGTCGGCGCCGACGGCTACGCGCAGGCGTCGGCCGACGCATCGCGCCGCGCGACGGGCAATGC
GCTGCCGCATACCGGCGACGCGGTGCTCGGCGTCGAGGCGAAGGGCGGCCAGGGGCTGCTGGCCGGCCAGTCGCTGCAAT
GGGCGGCGGGCGAGACGCTGACCATCGGCAGCGGCAACGACACCAACCTCGCGGTCAACCGGACGTTGCGCGTGCACAGC
GGGCAGGGCATCGGCTGGCTTGCCGGCGCGAACGGCGCGCAGGGCGTCGGCATGAGCGTGATCGCCGGCAAGGACGATCT
GGCGCTGCAGGCGCAGCACGACCTGATGGCGCTGCGCGCGCGCGACGATCTGAGGGTCGCGTCGATCGGCGCGGACGTCG
AGATCGCGGCGAAGCAGACCGTGCGGCTCGCGGTCAGCGGCGGCGCGCATCTGACGATCGAAGGCGGCAACGTCACGTTC
GGCTGCCCGGGCTCGCTCGTCGTTCATGCGGCCCAGCATACGTTCGTCGGGCCGGATCAACTGGCTCCCGCGCTGCCGCA
GTTTCCCGAGAAGGTGTGCGTCGAATGCCTGAAGCACGCGATGCAATCGGGCAGCGCACTGGCCGGCAAGGCGATCTGA

Upstream 100 bases:

>100_bases
CGGGATGATCGCGCTGCTCAGTGGTTTTATCCGTTGTCCCGTTTTCGTCGCAACGAGCCGTATTCAAAAAATAGTCGAAC
CCTGAGAGAGCGGGATTCTC

Downstream 100 bases:

>100_bases
GCATGGCGACCGAGCGCTTCGACTGGATCGACCCGTACCCGGCGCGGACGCTGCCGCGTCTGCGGCAGGTGCTCGACGCG
CCGTTGACGCATGGGCGCTG

Product: hypothetical protein

Products: NA

Alternate protein names: Type VI Secretion System Vgr Family Protein; VGR-Related Protein; Rhs Element Vgr Family Protein; Vgr-Related Protein; Rhs Element Vgr Family; VGR-Like Protein; VGR-Related Type VI Secretion System Protein; Vgr Related Protein; Rhs Element Vgr Related Protein; Rhs Element Vgr-Related Protein; Type VI Secretion System VgrG Family Protein; Rhs Family Protein; VgrG Protein

Number of amino acids: Translated: 932; Mature: 931

Protein sequence:

>932_residues
MSVITQFTSLFSAANCLYCLDGPGEIASLQIERWVGRETLSENFQWDVYALATDPGLDLDAMLGQRVTIRTALANGTSAV
RSGLVAQAECIGYDAGLARYCLQLVPWLAALAHGRDERTFVRQGVADVLGAVFAPYGAIARWRFTADANQRIAELGARDY
RVQYRTHTHFDFVRHVLAEAGLGFCFVEEADAPAGHTMLIFDDSTQLPEDETSARMGGVPQRLSGTATEPDDVIVGIGRS
LSLTADRVTLISSDYRGNQSTSATASLGNPAGSRELYDDVGPEAFDSLREADAAARRHADAIVSAARFWTGYGTLRTARA
GRALRIAGATWRMSRGGAPAPDAFVLTRVDQIGINNLPATVMERVERSLGPLPPANLDARVLAQAKAGGYANRFDAAPRD
QAWRPTLEDGTGQRLNPVPTALGAQTAIVVGPQGETRPGSTGPVHTDAQGRLRLRYHWQADGDAGTYPTRAMQRLASEGH
GLQQTPRIGHEVLVQFVNGLVHRPIVLGGLFNGRGEGGEAPTPGGEAGQPLDESVYAQASDHAASAQGNLAGGHSPAWHG
AGGGAKRHDHAGALSGFKSQGFDGQGYNQLVADDTDRMGRMQMATTHAATQLNIGHLRHQADNYLGSFRGQGVELRSDAY
GALRGARGVLISSYAPTGPSQPAGDASALQSLLAQQAGLAKLLDKSADTHKTLPFAAQRGAQRAGQSSMNGDAAPLDALG
KSFATTVGADGYAQASADASRRATGNALPHTGDAVLGVEAKGGQGLLAGQSLQWAAGETLTIGSGNDTNLAVNRTLRVHS
GQGIGWLAGANGAQGVGMSVIAGKDDLALQAQHDLMALRARDDLRVASIGADVEIAAKQTVRLAVSGGAHLTIEGGNVTF
GCPGSLVVHAAQHTFVGPDQLAPALPQFPEKVCVECLKHAMQSGSALAGKAI

Sequences:

>Translated_932_residues
MSVITQFTSLFSAANCLYCLDGPGEIASLQIERWVGRETLSENFQWDVYALATDPGLDLDAMLGQRVTIRTALANGTSAV
RSGLVAQAECIGYDAGLARYCLQLVPWLAALAHGRDERTFVRQGVADVLGAVFAPYGAIARWRFTADANQRIAELGARDY
RVQYRTHTHFDFVRHVLAEAGLGFCFVEEADAPAGHTMLIFDDSTQLPEDETSARMGGVPQRLSGTATEPDDVIVGIGRS
LSLTADRVTLISSDYRGNQSTSATASLGNPAGSRELYDDVGPEAFDSLREADAAARRHADAIVSAARFWTGYGTLRTARA
GRALRIAGATWRMSRGGAPAPDAFVLTRVDQIGINNLPATVMERVERSLGPLPPANLDARVLAQAKAGGYANRFDAAPRD
QAWRPTLEDGTGQRLNPVPTALGAQTAIVVGPQGETRPGSTGPVHTDAQGRLRLRYHWQADGDAGTYPTRAMQRLASEGH
GLQQTPRIGHEVLVQFVNGLVHRPIVLGGLFNGRGEGGEAPTPGGEAGQPLDESVYAQASDHAASAQGNLAGGHSPAWHG
AGGGAKRHDHAGALSGFKSQGFDGQGYNQLVADDTDRMGRMQMATTHAATQLNIGHLRHQADNYLGSFRGQGVELRSDAY
GALRGARGVLISSYAPTGPSQPAGDASALQSLLAQQAGLAKLLDKSADTHKTLPFAAQRGAQRAGQSSMNGDAAPLDALG
KSFATTVGADGYAQASADASRRATGNALPHTGDAVLGVEAKGGQGLLAGQSLQWAAGETLTIGSGNDTNLAVNRTLRVHS
GQGIGWLAGANGAQGVGMSVIAGKDDLALQAQHDLMALRARDDLRVASIGADVEIAAKQTVRLAVSGGAHLTIEGGNVTF
GCPGSLVVHAAQHTFVGPDQLAPALPQFPEKVCVECLKHAMQSGSALAGKAI
>Mature_931_residues
SVITQFTSLFSAANCLYCLDGPGEIASLQIERWVGRETLSENFQWDVYALATDPGLDLDAMLGQRVTIRTALANGTSAVR
SGLVAQAECIGYDAGLARYCLQLVPWLAALAHGRDERTFVRQGVADVLGAVFAPYGAIARWRFTADANQRIAELGARDYR
VQYRTHTHFDFVRHVLAEAGLGFCFVEEADAPAGHTMLIFDDSTQLPEDETSARMGGVPQRLSGTATEPDDVIVGIGRSL
SLTADRVTLISSDYRGNQSTSATASLGNPAGSRELYDDVGPEAFDSLREADAAARRHADAIVSAARFWTGYGTLRTARAG
RALRIAGATWRMSRGGAPAPDAFVLTRVDQIGINNLPATVMERVERSLGPLPPANLDARVLAQAKAGGYANRFDAAPRDQ
AWRPTLEDGTGQRLNPVPTALGAQTAIVVGPQGETRPGSTGPVHTDAQGRLRLRYHWQADGDAGTYPTRAMQRLASEGHG
LQQTPRIGHEVLVQFVNGLVHRPIVLGGLFNGRGEGGEAPTPGGEAGQPLDESVYAQASDHAASAQGNLAGGHSPAWHGA
GGGAKRHDHAGALSGFKSQGFDGQGYNQLVADDTDRMGRMQMATTHAATQLNIGHLRHQADNYLGSFRGQGVELRSDAYG
ALRGARGVLISSYAPTGPSQPAGDASALQSLLAQQAGLAKLLDKSADTHKTLPFAAQRGAQRAGQSSMNGDAAPLDALGK
SFATTVGADGYAQASADASRRATGNALPHTGDAVLGVEAKGGQGLLAGQSLQWAAGETLTIGSGNDTNLAVNRTLRVHSG
QGIGWLAGANGAQGVGMSVIAGKDDLALQAQHDLMALRARDDLRVASIGADVEIAAKQTVRLAVSGGAHLTIEGGNVTFG
CPGSLVVHAAQHTFVGPDQLAPALPQFPEKVCVECLKHAMQSGSALAGKAI

Specific function: Unknown

COG id: COG3501

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 97455; Mature: 97324

Theoretical pI: Translated: 6.67; Mature: 6.67

Prosite motif: PS00047 HISTONE_H4

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
2.4 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
2.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSVITQFTSLFSAANCLYCLDGPGEIASLQIERWVGRETLSENFQWDVYALATDPGLDLD
CCHHHHHHHHHHHCCEEEEECCCCCEEEEEHHHHHCHHHHHCCCCEEEEEEECCCCCCHH
AMLGQRVTIRTALANGTSAVRSGLVAQAECIGYDAGLARYCLQLVPWLAALAHGRDERTF
HHHCCCEEEEEECCCCHHHHHHCCHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCHHHH
VRQGVADVLGAVFAPYGAIARWRFTADANQRIAELGARDYRVQYRTHTHFDFVRHVLAEA
HHHHHHHHHHHHHCCCCHHEEEEEECCHHHHHHHCCCCCEEEEEEECCHHHHHHHHHHHC
GLGFCFVEEADAPAGHTMLIFDDSTQLPEDETSARMGGVPQRLSGTATEPDDVIVGIGRS
CCCEEEEECCCCCCCCEEEEECCCCCCCCCHHHHHHCCCCHHHCCCCCCCCCEEEECCCC
LSLTADRVTLISSDYRGNQSTSATASLGNPAGSRELYDDVGPEAFDSLREADAAARRHAD
EEECCCEEEEEECCCCCCCCCCCEECCCCCCCCCHHHHHCCHHHHHHHHHHHHHHHHHHH
AIVSAARFWTGYGTLRTARAGRALRIAGATWRMSRGGAPAPDAFVLTRVDQIGINNLPAT
HHHHHHHHHHCCCHHHHHCCCCEEEEECCEEEECCCCCCCCCCEEEEEHHHCCCCCCCHH
VMERVERSLGPLPPANLDARVLAQAKAGGYANRFDAAPRDQAWRPTLEDGTGQRLNPVPT
HHHHHHHHHCCCCCCCCCHHHHHHHHCCCCCHHCCCCCCCCCCCCCCCCCCCCCCCCCCH
ALGAQTAIVVGPQGETRPGSTGPVHTDAQGRLRLRYHWQADGDAGTYPTRAMQRLASEGH
HCCCCEEEEECCCCCCCCCCCCCCCCCCCCEEEEEEEEECCCCCCCCHHHHHHHHHHCCC
GLQQTPRIGHEVLVQFVNGLVHRPIVLGGLFNGRGEGGEAPTPGGEAGQPLDESVYAQAS
CCCCCCCHHHHHHHHHHHHHHHCCEEEEECCCCCCCCCCCCCCCCCCCCCCCHHHHHHCC
DHAASAQGNLAGGHSPAWHGAGGGAKRHDHAGALSGFKSQGFDGQGYNQLVADDTDRMGR
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHCCHHHCCCCCCCCCCHHCCCHHHHCC
MQMATTHAATQLNIGHLRHQADNYLGSFRGQGVELRSDAYGALRGARGVLISSYAPTGPS
CHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCEEECCCHHHHHHCCCCEEEECCCCCCCC
QPAGDASALQSLLAQQAGLAKLLDKSADTHKTLPFAAQRGAQRAGQSSMNGDAAPLDALG
CCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCHHHHH
KSFATTVGADGYAQASADASRRATGNALPHTGDAVLGVEAKGGQGLLAGQSLQWAAGETL
HHHHHHCCCCCCCCCCCCCHHCCCCCCCCCCCCEEEEEECCCCCEEEECCCEEECCCCEE
TIGSGNDTNLAVNRTLRVHSGQGIGWLAGANGAQGVGMSVIAGKDDLALQAQHDLMALRA
EECCCCCCCEEEEEEEEEECCCCEEEEECCCCCCCCCEEEEECCCCCEEEEHHHHHEECC
RDDLRVASIGADVEIAAKQTVRLAVSGGAHLTIEGGNVTFGCPGSLVVHAAQHTFVGPDQ
CCCCEEEEECCCEEEECCCEEEEEEECCCEEEEECCEEEECCCCHHEEEEHHHCCCCHHH
LAPALPQFPEKVCVECLKHAMQSGSALAGKAI
HCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCC
>Mature Secondary Structure 
SVITQFTSLFSAANCLYCLDGPGEIASLQIERWVGRETLSENFQWDVYALATDPGLDLD
CHHHHHHHHHHHCCEEEEECCCCCEEEEEHHHHHCHHHHHCCCCEEEEEEECCCCCCHH
AMLGQRVTIRTALANGTSAVRSGLVAQAECIGYDAGLARYCLQLVPWLAALAHGRDERTF
HHHCCCEEEEEECCCCHHHHHHCCHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCHHHH
VRQGVADVLGAVFAPYGAIARWRFTADANQRIAELGARDYRVQYRTHTHFDFVRHVLAEA
HHHHHHHHHHHHHCCCCHHEEEEEECCHHHHHHHCCCCCEEEEEEECCHHHHHHHHHHHC
GLGFCFVEEADAPAGHTMLIFDDSTQLPEDETSARMGGVPQRLSGTATEPDDVIVGIGRS
CCCEEEEECCCCCCCCEEEEECCCCCCCCCHHHHHHCCCCHHHCCCCCCCCCEEEECCCC
LSLTADRVTLISSDYRGNQSTSATASLGNPAGSRELYDDVGPEAFDSLREADAAARRHAD
EEECCCEEEEEECCCCCCCCCCCEECCCCCCCCCHHHHHCCHHHHHHHHHHHHHHHHHHH
AIVSAARFWTGYGTLRTARAGRALRIAGATWRMSRGGAPAPDAFVLTRVDQIGINNLPAT
HHHHHHHHHHCCCHHHHHCCCCEEEEECCEEEECCCCCCCCCCEEEEEHHHCCCCCCCHH
VMERVERSLGPLPPANLDARVLAQAKAGGYANRFDAAPRDQAWRPTLEDGTGQRLNPVPT
HHHHHHHHHCCCCCCCCCHHHHHHHHCCCCCHHCCCCCCCCCCCCCCCCCCCCCCCCCCH
ALGAQTAIVVGPQGETRPGSTGPVHTDAQGRLRLRYHWQADGDAGTYPTRAMQRLASEGH
HCCCCEEEEECCCCCCCCCCCCCCCCCCCCEEEEEEEEECCCCCCCCHHHHHHHHHHCCC
GLQQTPRIGHEVLVQFVNGLVHRPIVLGGLFNGRGEGGEAPTPGGEAGQPLDESVYAQAS
CCCCCCCHHHHHHHHHHHHHHHCCEEEEECCCCCCCCCCCCCCCCCCCCCCCHHHHHHCC
DHAASAQGNLAGGHSPAWHGAGGGAKRHDHAGALSGFKSQGFDGQGYNQLVADDTDRMGR
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHCCHHHCCCCCCCCCCHHCCCHHHHCC
MQMATTHAATQLNIGHLRHQADNYLGSFRGQGVELRSDAYGALRGARGVLISSYAPTGPS
CHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCEEECCCHHHHHHCCCCEEEECCCCCCCC
QPAGDASALQSLLAQQAGLAKLLDKSADTHKTLPFAAQRGAQRAGQSSMNGDAAPLDALG
CCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCHHHHH
KSFATTVGADGYAQASADASRRATGNALPHTGDAVLGVEAKGGQGLLAGQSLQWAAGETL
HHHHHHCCCCCCCCCCCCCHHCCCCCCCCCCCCEEEEEECCCCCEEEECCCEEECCCCEE
TIGSGNDTNLAVNRTLRVHSGQGIGWLAGANGAQGVGMSVIAGKDDLALQAQHDLMALRA
EECCCCCCCEEEEEEEEEECCCCEEEEECCCCCCCCCEEEEECCCCCEEEEHHHHHEECC
RDDLRVASIGADVEIAAKQTVRLAVSGGAHLTIEGGNVTFGCPGSLVVHAAQHTFVGPDQ
CCCCEEEEECCCEEEECCCEEEEEEECCCEEEEECCEEEECCCCHHEEEEHHHCCCCHHH
LAPALPQFPEKVCVECLKHAMQSGSALAGKAI
HCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA