Definition Burkholderia pseudomallei K96243 chromosome chromosome 1, complete sequence.
Accession NC_006350
Length 4,074,542

Click here to switch to the map view.

The map label for this gene is 53719653

Identifier: 53719653

GI number: 53719653

Start: 2441411

End: 2441716

Strand: Reverse

Name: 53719653

Synonym: BPSL2042

Alternate gene names: NA

Gene position: 2441716-2441411 (Counterclockwise)

Preceding gene: 53719654

Following gene: 53719652

Centisome position: 59.93

GC content: 66.01

Gene sequence:

>306_bases
ATGTTGAATGGACTATTGATGAATTTCGGCACCGACGTCTTTCGCTTTTCGCGGCGGCCCACTACGTCTCTTGCGCCTGT
GTTCGCGCATGCGCGCGTGCGTGCGACGACAGCGCACGAATCCACCGAGCACGTTGAGCGCCAGGAACGGCAAGCATTGC
GGATCTGGCGTGCGCCGGCAGTCGACGAATCGAGCGCGCTCCCGCGCATCGACGAACAACCCGCGCTTCGCGCCGCAAGC
GCTCGCCGCGCCGCGCCCCAACACCTGGACCCGCGCCGCGAAAACGTCGCGCGCGGGGCCTATTGA

Upstream 100 bases:

>100_bases
TCGCGTCCTCGACCGCGCCGCAGGACGCGTGCGTATCGCGTTGCCGTCGCAGGACGACGGCCAGTGCGCGTGGTCCCGAT
GAACGGCATCGAATATTGGC

Downstream 100 bases:

>100_bases
ACGGAACGAGCCATGTCGATCCCCACTGACGTTCTGCAAGCACTCTTCGGCGGCTGGTCGCAACACGACCGCTTTCTCTG
GATCACGACGCCGCTCGGCG

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 101; Mature: 101

Protein sequence:

>101_residues
MLNGLLMNFGTDVFRFSRRPTTSLAPVFAHARVRATTAHESTEHVERQERQALRIWRAPAVDESSALPRIDEQPALRAAS
ARRAAPQHLDPRRENVARGAY

Sequences:

>Translated_101_residues
MLNGLLMNFGTDVFRFSRRPTTSLAPVFAHARVRATTAHESTEHVERQERQALRIWRAPAVDESSALPRIDEQPALRAAS
ARRAAPQHLDPRRENVARGAY
>Mature_101_residues
MLNGLLMNFGTDVFRFSRRPTTSLAPVFAHARVRATTAHESTEHVERQERQALRIWRAPAVDESSALPRIDEQPALRAAS
ARRAAPQHLDPRRENVARGAY

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 11400; Mature: 11400

Theoretical pI: Translated: 11.87; Mature: 11.87

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
2.0 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
2.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLNGLLMNFGTDVFRFSRRPTTSLAPVFAHARVRATTAHESTEHVERQERQALRIWRAPA
CCCCHHHHHCCHHHHHCCCCCCCHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHCCCC
VDESSALPRIDEQPALRAASARRAAPQHLDPRRENVARGAY
CCCCCCCCCCCCCCHHHHHHHHHCCCCCCCCCHHHHCCCCC
>Mature Secondary Structure
MLNGLLMNFGTDVFRFSRRPTTSLAPVFAHARVRATTAHESTEHVERQERQALRIWRAPA
CCCCHHHHHCCHHHHHCCCCCCCHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHCCCC
VDESSALPRIDEQPALRAASARRAAPQHLDPRRENVARGAY
CCCCCCCCCCCCCCHHHHHHHHHCCCCCCCCCHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA