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The map label for this gene is tse [H]

Identifier: 53719588

GI number: 53719588

Start: 2352657

End: 2354333

Strand: Reverse

Name: tse [H]

Synonym: BPSL1976

Alternate gene names: 53719588

Gene position: 2354333-2352657 (Counterclockwise)

Preceding gene: 53719590

Following gene: 53719583

Centisome position: 57.78

GC content: 70.6

Gene sequence:

>1677_bases
ATGAAAGGAGTATCGCTGCACGGCAAGCATTTCCTGCCCGACGACGCGACGGGAAACCGCGGGCGCACGCCCAAGCCCGG
CAAGCCGCGCCGCGCGCGCCGCGCATGGTCGGTGAAGACGACGCTGCGCGCCGCGTTCGCGCTGCTGCTCGTCGGCACGC
TTGCCGTGGGCCTGTTTTCGCTCGCCCAGATCAGCCGGCTCAACAGCTCGATCAGGTCCGTGTACGAGCAGGGGCATGTC
GCGAGCCGCGCGGCCGAGGAAGTGCGCGCGTCGGTGCTGCGCGCGAGCCGTGCGCAGAAGATGCTGATCACGGCGACGAC
CGCGAAGGAGCGCGACGAACTCGGCGCGGACATCGACAAGGGGCTCGCCGCGATCGGCGCCGAACTCGCGACGCTGCAGC
GGCACGCGGACGGCGCGGCCGACGATGCCGCGCGCCTGAAGGCGTTCGGCGCCGCGGTGCTCGCGTGGAGTGCGCATCTG
CGCGATTTCGTGAAGCTCGTGCGCGAGCAGCCGCTCGATCTGTCGCAAATGAGCTGGCAGGTGGGCTCGCAGGATGTGTC
GCTGCTCGTCGAGACGGGCAAGCTCGAGAAGCTCGTCGACGGGCTCGTCGATGCGCGCGGCGACGCGTCGAAGGCGACGC
TCGACGCATCGGGCGCGATATTTCGCGAATCGTTCGCGATGCTCGCCGCGATGACCGCGGCGCTCGTCGTGCTCGCGTTC
GTGATCGCCGCGTGGGTCGTGCGGCGGCTCGGCGCGCAACTGGGCGGCGAGCCCGCGTATGCGAAGGAGATCGCGGTCAG
CATTTCGCGCGGCGACCTGTCGAACGTGATCAGGCTCGACACGCGCGATCACGACAGCATGCTGCACGCGCTGCGCGACA
TGCAGGAAGGCCTGGCCGGCACGGTGCGCGAGATCTCCGCGAGCGCCGAGGCGATCGCGTCCGCGGCGGGCGAGATCGCG
ATGGGCAATCTCGATCTGTCGCAGCGCACCGAGCAGCAGGCGGTCGCGCTCGAGCGCACCGCGACGAGCATGGGGCAACT
GACGTCGACCGTCCACCAGAACGCGGAGAACGCGCGGCAGGCGAGCACGCTCGCGGCGAACGCGTCGTCGGTGGCCGAGG
CGGGCGGCACGGTGGTCGGCCGCGTGGTCTCGACGATGAACGAGATCGACGAGAGCGCGAAGAGCATTCGCGACATCATC
GGCGTGATCGAGAGCATCGCGTTCCAGACCAACATCCTCGCGTTGAACGCGGCCGTCGAGGCGGCGCGCGCGGGCGAGGA
AGGGCGCGGGTTCTCGGTTGTCGCGAGCGAGGTGCGCTCGCTCGCGCAGCGCTCGGCGAGCGCCGCGAAGGAGATCAAGG
CGCTGATCGGCGCGTCGGTCGAGCGGGTCGCGAACGGCGCGGTGCTCGCGCAGGACGCCGGGCGCACGATGGACGAGGTC
GTGCGCGCGGTCAAGCGCGTGACCGACATCATGGGCGAGATCTCCGCCGCGTCGAGTGAGCAGAGCGCGGGCATCGACGC
GATCGAGCGCGCGGTCACGCAGATGGACGCCGGTACGCAGCAGAACGCGGCGCTCGTCGAGGAAGCGGCCGCCGCCGCGC
GCTCGCTCGACGAGCAGGCGCAGATGCTCAAGGAGATGGTCGGGCGTTTTCACTTGCCCGCGCACGCGGCGGGCTGA

Upstream 100 bases:

>100_bases
GCCTGCCGTAGAACCCGTCGAGACGTATCGCGCGAGCGCCGACGGTCAAGCCGAAGCCGCCTTTTCGGCCGCAGCATCAG
ATCAGAACGGGGATCCATCG

Downstream 100 bases:

>100_bases
GCGGGCGCGACGCGGCCGGCGTGCCGCAGCGCGCCGCAGCGGCACGCGCCGCGCGCTCGGCGGACGAGCGGACGAGCGGA
CGAGCGCGCATCGCCGGCGT

Product: putative chemotaxis methyl-accepting membrane protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 558; Mature: 558

Protein sequence:

>558_residues
MKGVSLHGKHFLPDDATGNRGRTPKPGKPRRARRAWSVKTTLRAAFALLLVGTLAVGLFSLAQISRLNSSIRSVYEQGHV
ASRAAEEVRASVLRASRAQKMLITATTAKERDELGADIDKGLAAIGAELATLQRHADGAADDAARLKAFGAAVLAWSAHL
RDFVKLVREQPLDLSQMSWQVGSQDVSLLVETGKLEKLVDGLVDARGDASKATLDASGAIFRESFAMLAAMTAALVVLAF
VIAAWVVRRLGAQLGGEPAYAKEIAVSISRGDLSNVIRLDTRDHDSMLHALRDMQEGLAGTVREISASAEAIASAAGEIA
MGNLDLSQRTEQQAVALERTATSMGQLTSTVHQNAENARQASTLAANASSVAEAGGTVVGRVVSTMNEIDESAKSIRDII
GVIESIAFQTNILALNAAVEAARAGEEGRGFSVVASEVRSLAQRSASAAKEIKALIGASVERVANGAVLAQDAGRTMDEV
VRAVKRVTDIMGEISAASSEQSAGIDAIERAVTQMDAGTQQNAALVEEAAAAARSLDEQAQMLKEMVGRFHLPAHAAG

Sequences:

>Translated_558_residues
MKGVSLHGKHFLPDDATGNRGRTPKPGKPRRARRAWSVKTTLRAAFALLLVGTLAVGLFSLAQISRLNSSIRSVYEQGHV
ASRAAEEVRASVLRASRAQKMLITATTAKERDELGADIDKGLAAIGAELATLQRHADGAADDAARLKAFGAAVLAWSAHL
RDFVKLVREQPLDLSQMSWQVGSQDVSLLVETGKLEKLVDGLVDARGDASKATLDASGAIFRESFAMLAAMTAALVVLAF
VIAAWVVRRLGAQLGGEPAYAKEIAVSISRGDLSNVIRLDTRDHDSMLHALRDMQEGLAGTVREISASAEAIASAAGEIA
MGNLDLSQRTEQQAVALERTATSMGQLTSTVHQNAENARQASTLAANASSVAEAGGTVVGRVVSTMNEIDESAKSIRDII
GVIESIAFQTNILALNAAVEAARAGEEGRGFSVVASEVRSLAQRSASAAKEIKALIGASVERVANGAVLAQDAGRTMDEV
VRAVKRVTDIMGEISAASSEQSAGIDAIERAVTQMDAGTQQNAALVEEAAAAARSLDEQAQMLKEMVGRFHLPAHAAG
>Mature_558_residues
MKGVSLHGKHFLPDDATGNRGRTPKPGKPRRARRAWSVKTTLRAAFALLLVGTLAVGLFSLAQISRLNSSIRSVYEQGHV
ASRAAEEVRASVLRASRAQKMLITATTAKERDELGADIDKGLAAIGAELATLQRHADGAADDAARLKAFGAAVLAWSAHL
RDFVKLVREQPLDLSQMSWQVGSQDVSLLVETGKLEKLVDGLVDARGDASKATLDASGAIFRESFAMLAAMTAALVVLAF
VIAAWVVRRLGAQLGGEPAYAKEIAVSISRGDLSNVIRLDTRDHDSMLHALRDMQEGLAGTVREISASAEAIASAAGEIA
MGNLDLSQRTEQQAVALERTATSMGQLTSTVHQNAENARQASTLAANASSVAEAGGTVVGRVVSTMNEIDESAKSIRDII
GVIESIAFQTNILALNAAVEAARAGEEGRGFSVVASEVRSLAQRSASAAKEIKALIGASVERVANGAVLAQDAGRTMDEV
VRAVKRVTDIMGEISAASSEQSAGIDAIERAVTQMDAGTQQNAALVEEAAAAARSLDEQAQMLKEMVGRFHLPAHAAG

Specific function: Chemotactic-signal transducers respond to changes in the concentration of attractants and repellents in the environment, transduce a signal from the outside to the inside of the cell, and facilitate sensory adaptation through the variation of the level of

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 methyl-accepting transducer domain [H]

Homologues:

Organism=Escherichia coli, GI1788195, Length=288, Percent_Identity=59.7222222222222, Blast_Score=280, Evalue=1e-76,
Organism=Escherichia coli, GI1788194, Length=347, Percent_Identity=49.2795389048991, Blast_Score=274, Evalue=1e-74,
Organism=Escherichia coli, GI2367378, Length=300, Percent_Identity=55.6666666666667, Blast_Score=269, Evalue=3e-73,
Organism=Escherichia coli, GI1787690, Length=266, Percent_Identity=57.8947368421053, Blast_Score=256, Evalue=2e-69,
Organism=Escherichia coli, GI1789453, Length=336, Percent_Identity=36.9047619047619, Blast_Score=187, Evalue=2e-48,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004090
- InterPro:   IPR003122
- InterPro:   IPR004091
- InterPro:   IPR004089
- InterPro:   IPR003660 [H]

Pfam domain/function: PF00672 HAMP; PF00015 MCPsignal; PF02203 TarH [H]

EC number: NA

Molecular weight: Translated: 58548; Mature: 58548

Theoretical pI: Translated: 6.70; Mature: 6.70

Prosite motif: PS50111 CHEMOTAXIS_TRANSDUC_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
2.7 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKGVSLHGKHFLPDDATGNRGRTPKPGKPRRARRAWSVKTTLRAAFALLLVGTLAVGLFS
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LAQISRLNSSIRSVYEQGHVASRAAEEVRASVLRASRAQKMLITATTAKERDELGADIDK
HHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHEEEEECCHHHHHHHCCCHHH
GLAAIGAELATLQRHADGAADDAARLKAFGAAVLAWSAHLRDFVKLVREQPLDLSQMSWQ
HHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHH
VGSQDVSLLVETGKLEKLVDGLVDARGDASKATLDASGAIFRESFAMLAAMTAALVVLAF
CCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCEECCCHHHHHHHHHHHHHHHHHHHHHHH
VIAAWVVRRLGAQLGGEPAYAKEIAVSISRGDLSNVIRLDTRDHDSMLHALRDMQEGLAG
HHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCCHHHHHCCCCCCHHHHHHHHHHHHHHHHH
TVREISASAEAIASAAGEIAMGNLDLSQRTEQQAVALERTATSMGQLTSTVHQNAENARQ
HHHHHHHHHHHHHHHCCCCEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
ASTLAANASSVAEAGGTVVGRVVSTMNEIDESAKSIRDIIGVIESIAFQTNILALNAAVE
HHHHHHCHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
AARAGEEGRGFSVVASEVRSLAQRSASAAKEIKALIGASVERVANGAVLAQDAGRTMDEV
HHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEHHCCCCHHHH
VRAVKRVTDIMGEISAASSEQSAGIDAIERAVTQMDAGTQQNAALVEEAAAAARSLDEQA
HHHHHHHHHHHHHHHHCCCCHHCCHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHH
QMLKEMVGRFHLPAHAAG
HHHHHHHHHCCCCCCCCC
>Mature Secondary Structure
MKGVSLHGKHFLPDDATGNRGRTPKPGKPRRARRAWSVKTTLRAAFALLLVGTLAVGLFS
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LAQISRLNSSIRSVYEQGHVASRAAEEVRASVLRASRAQKMLITATTAKERDELGADIDK
HHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHEEEEECCHHHHHHHCCCHHH
GLAAIGAELATLQRHADGAADDAARLKAFGAAVLAWSAHLRDFVKLVREQPLDLSQMSWQ
HHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHH
VGSQDVSLLVETGKLEKLVDGLVDARGDASKATLDASGAIFRESFAMLAAMTAALVVLAF
CCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCEECCCHHHHHHHHHHHHHHHHHHHHHHH
VIAAWVVRRLGAQLGGEPAYAKEIAVSISRGDLSNVIRLDTRDHDSMLHALRDMQEGLAG
HHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCCHHHHHCCCCCCHHHHHHHHHHHHHHHHH
TVREISASAEAIASAAGEIAMGNLDLSQRTEQQAVALERTATSMGQLTSTVHQNAENARQ
HHHHHHHHHHHHHHHCCCCEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
ASTLAANASSVAEAGGTVVGRVVSTMNEIDESAKSIRDIIGVIESIAFQTNILALNAAVE
HHHHHHCHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
AARAGEEGRGFSVVASEVRSLAQRSASAAKEIKALIGASVERVANGAVLAQDAGRTMDEV
HHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEHHCCCCHHHH
VRAVKRVTDIMGEISAASSEQSAGIDAIERAVTQMDAGTQQNAALVEEAAAAARSLDEQA
HHHHHHHHHHHHHHHHCCCCHHCCHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHH
QMLKEMVGRFHLPAHAAG
HHHHHHHHHCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 2496104 [H]