| Definition | Burkholderia pseudomallei K96243 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_006350 |
| Length | 4,074,542 |
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The map label for this gene is 53719508
Identifier: 53719508
GI number: 53719508
Start: 2255773
End: 2257011
Strand: Reverse
Name: 53719508
Synonym: BPSL1894
Alternate gene names: NA
Gene position: 2257011-2255773 (Counterclockwise)
Preceding gene: 53719509
Following gene: 53719507
Centisome position: 55.39
GC content: 72.48
Gene sequence:
>1239_bases ATGAACGCGAGAACACTCTCCTTGGCTGAACCCGCCGTCACCGACTACTTCGTCTGCGCGTCGCCCCATGGCGAGCACGT GAGCTGGCTTGCGCAAACGCTCGTGTCGGCGGGGACGGTCGAGCCCGCGCCGCTCGAGCCGACGGCGCTCGCGCAGCGGA TCGCGGGGCTCAATCCGGTGCTCGTCTTCGTCGATTTCTCGGGCGGCCACGCGCAGGCGGCGAGCGCGGCGGCCGCCGCG CTGCGCGTGTCGCATCCGGGGCTGCCGATCGTCGCGCTCGGCTCGCTCGGCGAGCCGGAAAGCGCGCTCGCCGCGCTGCG CGCGGGCGTGCGCGACTTCATCGATTTCTCGGCGCCCGCCGAGGACGCGCTCAGGATCACGCGCGGGCTGCTCGATCACG TCGGCGATCAGCCGAGCCGCCACGGCCGGCTGATCGCGCTGCTCGGCGCGCGCGCCGGAATGGGCGCGAGCACGCTCGCC GCGAACCTGTCGGTGCTGGTGCAAAAGCGCTCGGCCGCGCTCGGCCGCCAGACGGCGCTCGTCGATCTCGGGCTGCCGGC GGGCGACGGCGCGCTGTTCCTGAACACGCGCTGCGAATTCGATTTCGTCGAGGCGGTGCGCAACCTGCGCCGCTTCGACC GGACCTTCGTGAACACGGCGCTCGCGCGCCATGCGAGCGGCGTCGCGCTCACGTCGCTGCCGCCGAACCTGGCCGGGCTG CGCGATGTGTCGTACGCGTCGTGCGTGGGCCTGATGAACCGGCTGCGCGCGTTCTTCGATTGCCAGATCGTCGATCTGGG CGGCTTCTCGAACCGCGATTTCGTCGCGCAGACCGCGAACGCCGCCGACGAATCGTGGCTCCTGTGCGACCAGGGCGTCG CCTCCGTCGTGTCGGCCGTCGAGCTGCTCGAGTCGCTGCGCGACACGGGCGTGGACACGGAGAACGTGCGCCTCGTCGTC AACCAGTACGATCCGGCGCTCGGCCTCGCGCCCGCGCAGATCGCGGAGCGCCTCGGCCTCGCGCTCGCCGCGACGCTGCC GTCGCGGCGCGTGCCGATCGGGCACGCGGCCAATCAGGGCAAGCTGATCGTCGACGTTGCCGAGCGCGATCCGTACGTGC GCGCGCTCGAGCCGCTCGTCGAACGCGCGACGGGCGGCGCGGGAGCCGCCGCGCCGCGCCCGGCGGGCGGTCTTTCCGCG CTCAGGCGCTTCATTCAACCCACCTCCAAGCGGTCGTAA
Upstream 100 bases:
>100_bases GTCGCCGGATGCGGGGCCGGGGTTCTCGAAATGAGCGCGCGACGCCACGGCCGCGCGCGCGCGAGCGCCGCGACGCGGCG CGCAACCGGAATGCATCACG
Downstream 100 bases:
>100_bases GAGATGGCACACGACATTCAATTTGCCGACGGGGCGACGCCGTTCTCGCAAACGCAGCAGTTTCACGACATCAAGAACGC GGCGCACGAGCATCTCCTCA
Product: putative fimbriae assembly protein
Products: NA
Alternate protein names: Pilus Assembly Protein CpaE; Flp Pilus Assembly Protein ATPase CpaE-Like Protein; Flp Pilus Assembly Protein ATPase CpaE-Like; Response Regulator Receiver Domain-Containing Protein; Pilus Assembly Protein; Response Receiver Involved In Pilum Assembly; Response Regulator; Flp Pilus Assembly ATPase; Flp Pilus Assembly Protein; Flp Pilus Assembly Protein CpaE; Flp Pilus Assembly Protein ATPase CpaE; Flp Pilus Assembly Response Receiver ATPase CpaE; Flp Pilus Assembly Protein ATPase; Flp Pilus Assembly ATPase CpaE; Response Regulator Receiver Domain Protein; Two-Component Response Regulator; Fimbriae Assembly Protein; Septum Site-Determining Protein; Chromosome Partitioning ATPase; Response Regulator Receiver; Type II Secretion System Protein; AAA ATPase; Cobyrinic Acid Ac-Diamide Synthase; Pilus Assembly Protein CpaE-Like Protein; Pilus Assembly Protein CpaE-Like
Number of amino acids: Translated: 412; Mature: 412
Protein sequence:
>412_residues MNARTLSLAEPAVTDYFVCASPHGEHVSWLAQTLVSAGTVEPAPLEPTALAQRIAGLNPVLVFVDFSGGHAQAASAAAAA LRVSHPGLPIVALGSLGEPESALAALRAGVRDFIDFSAPAEDALRITRGLLDHVGDQPSRHGRLIALLGARAGMGASTLA ANLSVLVQKRSAALGRQTALVDLGLPAGDGALFLNTRCEFDFVEAVRNLRRFDRTFVNTALARHASGVALTSLPPNLAGL RDVSYASCVGLMNRLRAFFDCQIVDLGGFSNRDFVAQTANAADESWLLCDQGVASVVSAVELLESLRDTGVDTENVRLVV NQYDPALGLAPAQIAERLGLALAATLPSRRVPIGHAANQGKLIVDVAERDPYVRALEPLVERATGGAGAAAPRPAGGLSA LRRFIQPTSKRS
Sequences:
>Translated_412_residues MNARTLSLAEPAVTDYFVCASPHGEHVSWLAQTLVSAGTVEPAPLEPTALAQRIAGLNPVLVFVDFSGGHAQAASAAAAA LRVSHPGLPIVALGSLGEPESALAALRAGVRDFIDFSAPAEDALRITRGLLDHVGDQPSRHGRLIALLGARAGMGASTLA ANLSVLVQKRSAALGRQTALVDLGLPAGDGALFLNTRCEFDFVEAVRNLRRFDRTFVNTALARHASGVALTSLPPNLAGL RDVSYASCVGLMNRLRAFFDCQIVDLGGFSNRDFVAQTANAADESWLLCDQGVASVVSAVELLESLRDTGVDTENVRLVV NQYDPALGLAPAQIAERLGLALAATLPSRRVPIGHAANQGKLIVDVAERDPYVRALEPLVERATGGAGAAAPRPAGGLSA LRRFIQPTSKRS >Mature_412_residues MNARTLSLAEPAVTDYFVCASPHGEHVSWLAQTLVSAGTVEPAPLEPTALAQRIAGLNPVLVFVDFSGGHAQAASAAAAA LRVSHPGLPIVALGSLGEPESALAALRAGVRDFIDFSAPAEDALRITRGLLDHVGDQPSRHGRLIALLGARAGMGASTLA ANLSVLVQKRSAALGRQTALVDLGLPAGDGALFLNTRCEFDFVEAVRNLRRFDRTFVNTALARHASGVALTSLPPNLAGL RDVSYASCVGLMNRLRAFFDCQIVDLGGFSNRDFVAQTANAADESWLLCDQGVASVVSAVELLESLRDTGVDTENVRLVV NQYDPALGLAPAQIAERLGLALAATLPSRRVPIGHAANQGKLIVDVAERDPYVRALEPLVERATGGAGAAAPRPAGGLSA LRRFIQPTSKRS
Specific function: Unknown
COG id: COG4963
COG function: function code U; Flp pilus assembly protein, ATPase CpaE
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 43059; Mature: 43059
Theoretical pI: Translated: 6.94; Mature: 6.94
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 0.7 %Met (Translated Protein) 1.9 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 0.7 %Met (Mature Protein) 1.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNARTLSLAEPAVTDYFVCASPHGEHVSWLAQTLVSAGTVEPAPLEPTALAQRIAGLNPV CCCCCCCCCCCCHHCEEEECCCCCHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHCCCCEE LVFVDFSGGHAQAASAAAAALRVSHPGLPIVALGSLGEPESALAALRAGVRDFIDFSAPA EEEEECCCCCHHHHHHHHHHHEECCCCCCEEEECCCCCCHHHHHHHHHHHHHHHHCCCCH EDALRITRGLLDHVGDQPSRHGRLIALLGARAGMGASTLAANLSVLVQKRSAALGRQTAL HHHHHHHHHHHHHHCCCCCCCCCEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHCCCEEE VDLGLPAGDGALFLNTRCEFDFVEAVRNLRRFDRTFVNTALARHASGVALTSLPPNLAGL EEECCCCCCCEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEECCCCCCCCC RDVSYASCVGLMNRLRAFFDCQIVDLGGFSNRDFVAQTANAADESWLLCDQGVASVVSAV CCCHHHHHHHHHHHHHHHHCEEEEECCCCCCCCHHHHCCCCCCCCEEEHHHHHHHHHHHH ELLESLRDTGVDTENVRLVVNQYDPALGLAPAQIAERLGLALAATLPSRRVPIGHAANQG HHHHHHHHCCCCCCCEEEEEECCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCC KLIVDVAERDPYVRALEPLVERATGGAGAAAPRPAGGLSALRRFIQPTSKRS CEEEEECCCCCHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHCCCCCCC >Mature Secondary Structure MNARTLSLAEPAVTDYFVCASPHGEHVSWLAQTLVSAGTVEPAPLEPTALAQRIAGLNPV CCCCCCCCCCCCHHCEEEECCCCCHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHCCCCEE LVFVDFSGGHAQAASAAAAALRVSHPGLPIVALGSLGEPESALAALRAGVRDFIDFSAPA EEEEECCCCCHHHHHHHHHHHEECCCCCCEEEECCCCCCHHHHHHHHHHHHHHHHCCCCH EDALRITRGLLDHVGDQPSRHGRLIALLGARAGMGASTLAANLSVLVQKRSAALGRQTAL HHHHHHHHHHHHHHCCCCCCCCCEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHCCCEEE VDLGLPAGDGALFLNTRCEFDFVEAVRNLRRFDRTFVNTALARHASGVALTSLPPNLAGL EEECCCCCCCEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEECCCCCCCCC RDVSYASCVGLMNRLRAFFDCQIVDLGGFSNRDFVAQTANAADESWLLCDQGVASVVSAV CCCHHHHHHHHHHHHHHHHCEEEEECCCCCCCCHHHHCCCCCCCCEEEHHHHHHHHHHHH ELLESLRDTGVDTENVRLVVNQYDPALGLAPAQIAERLGLALAATLPSRRVPIGHAANQG HHHHHHHHCCCCCCCEEEEEECCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCC KLIVDVAERDPYVRALEPLVERATGGAGAAAPRPAGGLSALRRFIQPTSKRS CEEEEECCCCCHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA