Definition Burkholderia pseudomallei K96243 chromosome chromosome 1, complete sequence.
Accession NC_006350
Length 4,074,542

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The map label for this gene is 53719498

Identifier: 53719498

GI number: 53719498

Start: 2245609

End: 2245881

Strand: Reverse

Name: 53719498

Synonym: BPSL1885

Alternate gene names: NA

Gene position: 2245881-2245609 (Counterclockwise)

Preceding gene: 53719500

Following gene: 53719493

Centisome position: 55.12

GC content: 68.5

Gene sequence:

>273_bases
ATGGAAAAATGGCTGACGATCACGATGCTCGGCGTCGCGCTGCTGGGCGCGGCAGGCGCCGCGACGGCGGGCGGCGTGGA
TCTGTCGATCGGCGTCGGTGTGCCGGTCGCGCCCGTCTACGTGGCGCCGCAGCCGGTTTATGTCGCGCCGCAGCCCGCGG
TCGTCGGTTATCCGGCGTACGGCTGGCGCGGCGACGACGAAGACGACGACTGGAAGCACTACCGCAAGCATTGGCGCAAG
TGGCACCGCCATCACGACGACGATGACGACTGA

Upstream 100 bases:

>100_bases
GTCGGGTTACAGGTCTCGCACGGCCGTTGCACCTGCGCCGGCGCGGGTTCGGTAGAGTGTCGCCAGAGGCCGGCCATGCC
GGCGAAACGAGGTGACGAAC

Downstream 100 bases:

>100_bases
CGGCGCGAGCCGGCTTGCCGCGGCGGCGCGGGCCCGTCGCGCCGCCGCAACGGACGCCGCAACGAAAGAAGAACGCCGCG
CGTGCGATGAAGGCCGCGCG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 90; Mature: 90

Protein sequence:

>90_residues
MEKWLTITMLGVALLGAAGAATAGGVDLSIGVGVPVAPVYVAPQPVYVAPQPAVVGYPAYGWRGDDEDDDWKHYRKHWRK
WHRHHDDDDD

Sequences:

>Translated_90_residues
MEKWLTITMLGVALLGAAGAATAGGVDLSIGVGVPVAPVYVAPQPVYVAPQPAVVGYPAYGWRGDDEDDDWKHYRKHWRK
WHRHHDDDDD
>Mature_90_residues
MEKWLTITMLGVALLGAAGAATAGGVDLSIGVGVPVAPVYVAPQPVYVAPQPAVVGYPAYGWRGDDEDDDWKHYRKHWRK
WHRHHDDDDD

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 9936; Mature: 9936

Theoretical pI: Translated: 5.45; Mature: 5.45

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
2.2 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
2.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MEKWLTITMLGVALLGAAGAATAGGVDLSIGVGVPVAPVYVAPQPVYVAPQPAVVGYPAY
CCCCHHHHHHHHHHHCCCCCCCCCCEEEEECCCCCCCEEEECCCCEEECCCCCEECCCCC
GWRGDDEDDDWKHYRKHWRKWHRHHDDDDD
CCCCCCCCCHHHHHHHHHHHHHHCCCCCCC
>Mature Secondary Structure
MEKWLTITMLGVALLGAAGAATAGGVDLSIGVGVPVAPVYVAPQPVYVAPQPAVVGYPAY
CCCCHHHHHHHHHHHCCCCCCCCCCEEEEECCCCCCCEEEECCCCEEECCCCCEECCCCC
GWRGDDEDDDWKHYRKHWRKWHRHHDDDDD
CCCCCCCCCHHHHHHHHHHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA