| Definition | Burkholderia pseudomallei K96243 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_006350 |
| Length | 4,074,542 |
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The map label for this gene is 53719492
Identifier: 53719492
GI number: 53719492
Start: 2238312
End: 2238938
Strand: Reverse
Name: 53719492
Synonym: BPSL1879
Alternate gene names: NA
Gene position: 2238938-2238312 (Counterclockwise)
Preceding gene: 53719493
Following gene: 53719491
Centisome position: 54.95
GC content: 65.87
Gene sequence:
>627_bases ATGACGATCGGCCAGGACGTGCATCTCATTCCCGCGAAGCTCGACGCGCTGCGCCCGACGCAGATCACGGTCGGCTATCG CGAAGTGAAGGCCAAGCGCAAGCATTGGAAGGCGCTCGGCAAGAAGGCGCGCAAGGCCGCGATCGAATCGCACTGGTTTC CGGCCGTGCTCGGGCCGGGCGGCGATTATTTCATCACCGATCACCATCATCTCGGGCTCGCGCTCCTCGAGGAGGGCGTG ACCGAAGTGAAGGCGATGCTGCTGAAGGATCTGTCCTGGCTCGACGAGACGATCTTCTGGCGGATGATGGAGCACAACCA GTGGGTGCATCCGTTCGGCGCGAACGGCGCGCGCCACGATTACGACCATCTGCCGACCTCGCTCGTCGGGCTGAAGGACG ATCCGTACCGCAGTCTCGCCGGCGAGTTGCGCGCGGCCGGCGGCTATGCGAAGGACGCGACGCCGTTCAGCGAATTCCTG TGGGCCGATTTCCTGCGCCCGAGGATCGCGCTTGCGCAAATCCGCAAGGAATTCGCGAAGGCGCTCGAGGCGGCGCTCGG CTATGCGCACACGCAGGAGGCGCGCTATCTGCCGGGCTGGTCCGGCGTGATCGCGGCGCCGCGCTGA
Upstream 100 bases:
>100_bases ACGCGGCACGGCGTCTCGCGCAAACTTCAAGGGCAATACGGTATTAACGCGAACGGCGATCCCATGTATCGTTGCCGACA TCCTATTCGGGAGCCCCATC
Downstream 100 bases:
>100_bases GCGCCGCGCCTTCGTTCGCACGACGGGCAACACCCACGGAACGCGCATGGATCTCCGCTCGAAGCACATCGACGCGCCGC CGCAGCATGCCGCGCATTTC
Product: hypothetical protein
Products: NA
Alternate protein names: ParB-Like Nuclease Superfamily
Number of amino acids: Translated: 208; Mature: 207
Protein sequence:
>208_residues MTIGQDVHLIPAKLDALRPTQITVGYREVKAKRKHWKALGKKARKAAIESHWFPAVLGPGGDYFITDHHHLGLALLEEGV TEVKAMLLKDLSWLDETIFWRMMEHNQWVHPFGANGARHDYDHLPTSLVGLKDDPYRSLAGELRAAGGYAKDATPFSEFL WADFLRPRIALAQIRKEFAKALEAALGYAHTQEARYLPGWSGVIAAPR
Sequences:
>Translated_208_residues MTIGQDVHLIPAKLDALRPTQITVGYREVKAKRKHWKALGKKARKAAIESHWFPAVLGPGGDYFITDHHHLGLALLEEGV TEVKAMLLKDLSWLDETIFWRMMEHNQWVHPFGANGARHDYDHLPTSLVGLKDDPYRSLAGELRAAGGYAKDATPFSEFL WADFLRPRIALAQIRKEFAKALEAALGYAHTQEARYLPGWSGVIAAPR >Mature_207_residues TIGQDVHLIPAKLDALRPTQITVGYREVKAKRKHWKALGKKARKAAIESHWFPAVLGPGGDYFITDHHHLGLALLEEGVT EVKAMLLKDLSWLDETIFWRMMEHNQWVHPFGANGARHDYDHLPTSLVGLKDDPYRSLAGELRAAGGYAKDATPFSEFLW ADFLRPRIALAQIRKEFAKALEAALGYAHTQEARYLPGWSGVIAAPR
Specific function: Unknown
COG id: COG4318
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 23386; Mature: 23255
Theoretical pI: Translated: 9.51; Mature: 9.51
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 1.9 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 1.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTIGQDVHLIPAKLDALRPTQITVGYREVKAKRKHWKALGKKARKAAIESHWFPAVLGPG CCCCCCCEEEHHHHHCCCCCEEECHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEECCC GDYFITDHHHLGLALLEEGVTEVKAMLLKDLSWLDETIFWRMMEHNQWVHPFGANGARHD CCEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCC YDHLPTSLVGLKDDPYRSLAGELRAAGGYAKDATPFSEFLWADFLRPRIALAQIRKEFAK HHHCCHHHCCCCCCHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH ALEAALGYAHTQEARYLPGWSGVIAAPR HHHHHHHHHHCCCCCCCCCCCCCCCCCC >Mature Secondary Structure TIGQDVHLIPAKLDALRPTQITVGYREVKAKRKHWKALGKKARKAAIESHWFPAVLGPG CCCCCCEEEHHHHHCCCCCEEECHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEECCC GDYFITDHHHLGLALLEEGVTEVKAMLLKDLSWLDETIFWRMMEHNQWVHPFGANGARHD CCEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCC YDHLPTSLVGLKDDPYRSLAGELRAAGGYAKDATPFSEFLWADFLRPRIALAQIRKEFAK HHHCCHHHCCCCCCHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH ALEAALGYAHTQEARYLPGWSGVIAAPR HHHHHHHHHHCCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA