Click here to switch to the map view.

The map label for this gene is ssuC [H]

Identifier: 53719470

GI number: 53719470

Start: 2210759

End: 2211580

Strand: Reverse

Name: ssuC [H]

Synonym: BPSL1857

Alternate gene names: 53719470

Gene position: 2211580-2210759 (Counterclockwise)

Preceding gene: 53719471

Following gene: 53719469

Centisome position: 54.28

GC content: 68.37

Gene sequence:

>822_bases
ATGACAACGACGCACTCGCGCGCGCACTTTGCCGCTCGCCGCGCCGCCGGCCGCGCCGCGCGCGCGGTCGCGCCTTGGCT
CGTGCCGCTTGTGCTCGTGCTCGCGTGGGAATTCGCCGCGCGCGCGGGCGCGCTGTCGAGCCGCGTGCTGCCCGAGCCGC
TTGCCGTCGTGCGCGCGGCGTGGGCGCTCGTCGAATCGGGCGACATGTGGGCGAACGTGAAGGTCAGCACGTGGCGCGCG
CTCGTCGGCTTTGCGATCGGCGGCGGCGTCGGGCTCGCGCTCGGTCTCGCCACCGGGCTTTCCAAGGCCGCCGAAGTCGC
GCTCGATTCGACGATCCAGATGATCCGCAACATTCCGGCGCTCGCGATGATTCCGCTCGTGATCCTGTGGTTCGGCATCG
ACGAGAAGGCCAAGCTCTTCCTCGTCGCGCTCGGCGTGTTCTTTCCCGTCTACATCAACACGTATCACGGCATTCGTTCG
GTCGACGCGGGCCTCGTCGAGATGGCGAGGAGCTACGGCGTGAGGGGCTTCGCGCTCTATCGCGACGTGATCCTGCCGGG
CGCGCTGCCGTCGATTCTCGTCGGCGTGCGCTTCGCGCTCGGGCTGATGTGGGTGATGCTGATCGTCGCCGAAACGATCT
CCGCGCAGTCGGGCATCGGCTACATGACGATGAACGCGCGCGAATTCTTGCAAACGGACGTGGTGGTGGTCGGCATCCTG
CTGTACGCGGTGCTCGGCAAGCTCGCCGATGTGCTCGCGAAGTGGCTCGAGCGCGCGACGCTGCGCTGGCTCCCCGCGCA
TCAACCGGGAGCCCATGCATGA

Upstream 100 bases:

>100_bases
ACACGCGCCGCGCGGGGCCGCTGTCGGGGCCGTTCGGCGAAGTCGTCGGCAACCAGTATCTGCCGAAGGCGAGCCAGAGC
TGAGCGAGGAGGGCATCGAG

Downstream 100 bases:

>100_bases
CTGGCACCACGCTGGCCGCCACGTACGGCCCGATCTCGGGCGCGGACCTCGAAGCCGAGCTCGCGCAGCCGCGCATCGCC
GACGGTGATGCGCAGGACGC

Product: putative aliphatic sulfonates transport permease

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 273; Mature: 272

Protein sequence:

>273_residues
MTTTHSRAHFAARRAAGRAARAVAPWLVPLVLVLAWEFAARAGALSSRVLPEPLAVVRAAWALVESGDMWANVKVSTWRA
LVGFAIGGGVGLALGLATGLSKAAEVALDSTIQMIRNIPALAMIPLVILWFGIDEKAKLFLVALGVFFPVYINTYHGIRS
VDAGLVEMARSYGVRGFALYRDVILPGALPSILVGVRFALGLMWVMLIVAETISAQSGIGYMTMNAREFLQTDVVVVGIL
LYAVLGKLADVLAKWLERATLRWLPAHQPGAHA

Sequences:

>Translated_273_residues
MTTTHSRAHFAARRAAGRAARAVAPWLVPLVLVLAWEFAARAGALSSRVLPEPLAVVRAAWALVESGDMWANVKVSTWRA
LVGFAIGGGVGLALGLATGLSKAAEVALDSTIQMIRNIPALAMIPLVILWFGIDEKAKLFLVALGVFFPVYINTYHGIRS
VDAGLVEMARSYGVRGFALYRDVILPGALPSILVGVRFALGLMWVMLIVAETISAQSGIGYMTMNAREFLQTDVVVVGIL
LYAVLGKLADVLAKWLERATLRWLPAHQPGAHA
>Mature_272_residues
TTTHSRAHFAARRAAGRAARAVAPWLVPLVLVLAWEFAARAGALSSRVLPEPLAVVRAAWALVESGDMWANVKVSTWRAL
VGFAIGGGVGLALGLATGLSKAAEVALDSTIQMIRNIPALAMIPLVILWFGIDEKAKLFLVALGVFFPVYINTYHGIRSV
DAGLVEMARSYGVRGFALYRDVILPGALPSILVGVRFALGLMWVMLIVAETISAQSGIGYMTMNAREFLQTDVVVVGILL
YAVLGKLADVLAKWLERATLRWLPAHQPGAHA

Specific function: Part of a binding-protein-dependent transport system for aliphatic sulfonates. Probably responsible for the translocation of the substrate across the membrane [H]

COG id: COG0600

COG function: function code P; ABC-type nitrate/sulfonate/bicarbonate transport system, permease component

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 ABC transmembrane type-1 domain [H]

Homologues:

Organism=Escherichia coli, GI87081802, Length=246, Percent_Identity=66.6666666666667, Blast_Score=306, Evalue=7e-85,
Organism=Escherichia coli, GI1786564, Length=211, Percent_Identity=35.5450236966825, Blast_Score=124, Evalue=8e-30,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000515 [H]

Pfam domain/function: PF00528 BPD_transp_1 [H]

EC number: NA

Molecular weight: Translated: 29279; Mature: 29148

Theoretical pI: Translated: 10.59; Mature: 10.59

Prosite motif: PS50928 ABC_TM1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.3 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.9 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTTTHSRAHFAARRAAGRAARAVAPWLVPLVLVLAWEFAARAGALSSRVLPEPLAVVRAA
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHH
WALVESGDMWANVKVSTWRALVGFAIGGGVGLALGLATGLSKAAEVALDSTIQMIRNIPA
HHHHHCCCCEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCH
LAMIPLVILWFGIDEKAKLFLVALGVFFPVYINTYHGIRSVDAGLVEMARSYGVRGFALY
HHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCHHHHH
RDVILPGALPSILVGVRFALGLMWVMLIVAETISAQSGIGYMTMNAREFLQTDVVVVGIL
HHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEECHHHHHHHHHHHHHHH
LYAVLGKLADVLAKWLERATLRWLPAHQPGAHA
HHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCC
>Mature Secondary Structure 
TTTHSRAHFAARRAAGRAARAVAPWLVPLVLVLAWEFAARAGALSSRVLPEPLAVVRAA
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHH
WALVESGDMWANVKVSTWRALVGFAIGGGVGLALGLATGLSKAAEVALDSTIQMIRNIPA
HHHHHCCCCEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCH
LAMIPLVILWFGIDEKAKLFLVALGVFFPVYINTYHGIRSVDAGLVEMARSYGVRGFALY
HHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCHHHHH
RDVILPGALPSILVGVRFALGLMWVMLIVAETISAQSGIGYMTMNAREFLQTDVVVVGIL
HHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEECHHHHHHHHHHHHHHH
LYAVLGKLADVLAKWLERATLRWLPAHQPGAHA
HHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 10506196; 8905232; 9278503 [H]