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The map label for this gene is yfcU [H]

Identifier: 53719413

GI number: 53719413

Start: 2141243

End: 2143711

Strand: Reverse

Name: yfcU [H]

Synonym: BPSL1800

Alternate gene names: 53719413

Gene position: 2143711-2141243 (Counterclockwise)

Preceding gene: 53719414

Following gene: 53719412

Centisome position: 52.61

GC content: 69.74

Gene sequence:

>2469_bases
GTGCGAATCAGACATTCCTTCCTCTGCGTGTTCATGCTGGCCGCCGGCAGCCATGCCCGGGCGACGGAGTTCAATGCGTC
GTTCCTGAGCATCGACGGCAGGAACGACGTCGACCTGTCGCAGTTCGCGCAGGCGGACTACACGCTGCCGGGCACATACC
TGCTCGACGTGCAGGTCAACGACGTGTTCTTCGGCCTGCAGCCGATCGAATTCGTCGCGCACGACGACGGGCAGGGCGCG
CGCGCGTGCGTCGCGCCCGAGCTCGTCGCGCAGTTCGGGCTGAAGAAGTCGCTCGTCGAGAACCTGCCGCGCACGATGGG
CGGCCGCTGCGCGGATCTCGCGTCGCTCGACGGCGTGACGATCCGTTATCAGAAAGGCGAAGGGCGCCTGAAGATCACGA
TTGCGCAAGCCGCGCTCGAATTCGCCGATGCGTCGTACCTGCCGCCCGAGCGCTGGAGCGACGGCGTCGACGGCGCGATG
CTCGACTATCGCGTGCTCGCGAACGCGAACCACGCGTTCGGCCGCGGCGCGCAGCAGAACAATGCGGTGCAGGCGTACGG
CACGATCGGCGCGAACTGGGGCGCGTGGCGCTTTCGCGGCGATTATCAGGCGCAGACTCGCGCGGGCGGCGCCGTGTACG
CGGAGCGCGCGTTCCGCTTCAACCAGCTGTACGCGTATCGCGCGCTGCCGTCGATTCGCTCGACGCTGTCGTTCGGCGAG
ATCTACGTCGATTCGGACATCTTCAGCACGTTCTCGATGTCGGGCGTCGCGATGAAGAGCGACGACCGGATGCTGCCGCC
TTCGATGCGCGGCTACGCGCCGCTCGTCACGGGCGTCGCGCGCACCAACGCGATCGTCAAGGTGATGCAGGACAGCCGCG
TGCTGTACATGACGAAGGTGTCGCCGGGCGCGTTCGCGCTGTCGAACCTGAACACGAGCGTGCAGGGCACGCTCGACGTC
GTCGTCGAGGAGGAGGACGGCACGGTGCAGCGCTTCCAGGTCGCGACCGCGGCGGTGCCGTTTCTCGCGCGCGAGGGCCA
ACTGCGCTACAAGACCGCGATCGGCCAGCCGCGCACCTTCGGCGGCGCGGGCATCACGCCGTGGTTCGGCTTCGCCGAGG
CCGCGTACGGGCTGCCGTTCGACGTGACCGTCTACGGCGGCCTCATCGCGGCGTCCGGCTATACGTCGGTCGCGTTCGGC
GTCGGCCGCGATTTCGGCCGTTTCGGCGCGCTGTCGGCCGACGTGACGCACGCGCGCGCGACGCTCTGGTGGAACGGGCG
GACGAAGCGCGGCAACTCGTATCGAATCAACTATTCGAAGCACGTCGACGCGCTCGACGCCGACGTGCGCTTCTTCGGCT
ATCGCTTCTCCGAGCGCGACTACACGAATTTCCAGCAGTTCTCGGGCGACCCGACCGCGTCGGGCCTCGCGAACGGCAAG
CAGCGCTATTCGGCGATGCTCTCCAAGCGCTTCGGCGATACGTCGACCTATTTCTCGTACGACCAGACGACCTACTGGGC
GCGCCCGTCCGATCGGCGCATCGGCGTGACGCTCACGCGCGCGTTCTCGCTCGGCGCGCTGAAGAGCGTGAACCTGGGTT
TCTCCGCGTTCCGCACGCAAGGCGCGGGCGGCGGCGGCAACCAGGTGTCGCTGACGGCGACGCTGCCGCTCGGCGAGCGC
CAGACGCTCACGTCGAGCGTATCGGCGGGCGAGGGCGGCACGAGCGTGAACGCGGGCTACCTCTACGATGGCGCGAACGG
GCGCACCTATCAGCTGTACGGCGGCACGACCGACGGCCGCGCGTCGGCGAACGCGAGCTTGCGGCAGCGCACGCCGTCGT
ACCAGCTCACCGCGCAGGCGTCGACGGTCGCGAACGCGTACGCGTCGGCGTCGCTCGAGGTCGACGGCTCGTTCGTCGCG
ACGCGCTACGGCGTGACCGCGCACGCGAACGGCAACGCGGGCGACACGCGCCTGCTCGTGTCGACCGACGGCGTGCCCGG
CGTGCCGCTGTCCGGCTCGTACGCCCGCACGAATGCGCGCGGCTATGCGGTGATCGACGGCGTGTCGCCGTACAACGTGT
ACGACGCGACCGTGAGCGTCGAGAAGCTCGGCCTCGACACCGACGTGACGAACCCGATTCAGCGCACCGTGCTCACCGAC
GGCGCGATCGGCTACATCCGGTTCAACGCGGCGCGCGGGCGCAACGTGTTCGTCACGCTGACGGGCGACGGCGGCGCGCC
GGTGCCGTTCGGCGCGTCGGTGCAGGACGCCGCGACCGGCAAGGAGCTCGGCATCGTCGGCGAGGCGGGCGCCGCGTACC
TGACGCAGGTGCAGCCGCGCGCGAAGCTCGTCGTGCGCGCCGGCGCGAAGACGATCTGCACGCCCGCCGCGCTTCCCGAC
ACGCTGCAGCTCGACGGCACGCCCGCGCCGGTGGCCTGCGAAGCCGCCGCGCAGCACGCGTCGCGCTGA

Upstream 100 bases:

>100_bases
CACCGCGAGGAAAGGGCGCGCGCCTTTTCCTCGCGCGAATCCGCTTCGCGTTCCCGCTTTTTCCGCGATCCCCATCCCGT
TACGGTTTCAGTCAGTCGGC

Downstream 100 bases:

>100_bases
GCGCGGCGCGCCGTCCCGCCCCTCGAATTCAAACCCGACCTAACCGACCTAACCGACCTAACCGACCTAACCGACCTAAC
CACCGAACCACCGAACCACC

Product: putative outer membrane usher protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 822; Mature: 822

Protein sequence:

>822_residues
MRIRHSFLCVFMLAAGSHARATEFNASFLSIDGRNDVDLSQFAQADYTLPGTYLLDVQVNDVFFGLQPIEFVAHDDGQGA
RACVAPELVAQFGLKKSLVENLPRTMGGRCADLASLDGVTIRYQKGEGRLKITIAQAALEFADASYLPPERWSDGVDGAM
LDYRVLANANHAFGRGAQQNNAVQAYGTIGANWGAWRFRGDYQAQTRAGGAVYAERAFRFNQLYAYRALPSIRSTLSFGE
IYVDSDIFSTFSMSGVAMKSDDRMLPPSMRGYAPLVTGVARTNAIVKVMQDSRVLYMTKVSPGAFALSNLNTSVQGTLDV
VVEEEDGTVQRFQVATAAVPFLAREGQLRYKTAIGQPRTFGGAGITPWFGFAEAAYGLPFDVTVYGGLIAASGYTSVAFG
VGRDFGRFGALSADVTHARATLWWNGRTKRGNSYRINYSKHVDALDADVRFFGYRFSERDYTNFQQFSGDPTASGLANGK
QRYSAMLSKRFGDTSTYFSYDQTTYWARPSDRRIGVTLTRAFSLGALKSVNLGFSAFRTQGAGGGGNQVSLTATLPLGER
QTLTSSVSAGEGGTSVNAGYLYDGANGRTYQLYGGTTDGRASANASLRQRTPSYQLTAQASTVANAYASASLEVDGSFVA
TRYGVTAHANGNAGDTRLLVSTDGVPGVPLSGSYARTNARGYAVIDGVSPYNVYDATVSVEKLGLDTDVTNPIQRTVLTD
GAIGYIRFNAARGRNVFVTLTGDGGAPVPFGASVQDAATGKELGIVGEAGAAYLTQVQPRAKLVVRAGAKTICTPAALPD
TLQLDGTPAPVACEAAAQHASR

Sequences:

>Translated_822_residues
MRIRHSFLCVFMLAAGSHARATEFNASFLSIDGRNDVDLSQFAQADYTLPGTYLLDVQVNDVFFGLQPIEFVAHDDGQGA
RACVAPELVAQFGLKKSLVENLPRTMGGRCADLASLDGVTIRYQKGEGRLKITIAQAALEFADASYLPPERWSDGVDGAM
LDYRVLANANHAFGRGAQQNNAVQAYGTIGANWGAWRFRGDYQAQTRAGGAVYAERAFRFNQLYAYRALPSIRSTLSFGE
IYVDSDIFSTFSMSGVAMKSDDRMLPPSMRGYAPLVTGVARTNAIVKVMQDSRVLYMTKVSPGAFALSNLNTSVQGTLDV
VVEEEDGTVQRFQVATAAVPFLAREGQLRYKTAIGQPRTFGGAGITPWFGFAEAAYGLPFDVTVYGGLIAASGYTSVAFG
VGRDFGRFGALSADVTHARATLWWNGRTKRGNSYRINYSKHVDALDADVRFFGYRFSERDYTNFQQFSGDPTASGLANGK
QRYSAMLSKRFGDTSTYFSYDQTTYWARPSDRRIGVTLTRAFSLGALKSVNLGFSAFRTQGAGGGGNQVSLTATLPLGER
QTLTSSVSAGEGGTSVNAGYLYDGANGRTYQLYGGTTDGRASANASLRQRTPSYQLTAQASTVANAYASASLEVDGSFVA
TRYGVTAHANGNAGDTRLLVSTDGVPGVPLSGSYARTNARGYAVIDGVSPYNVYDATVSVEKLGLDTDVTNPIQRTVLTD
GAIGYIRFNAARGRNVFVTLTGDGGAPVPFGASVQDAATGKELGIVGEAGAAYLTQVQPRAKLVVRAGAKTICTPAALPD
TLQLDGTPAPVACEAAAQHASR
>Mature_822_residues
MRIRHSFLCVFMLAAGSHARATEFNASFLSIDGRNDVDLSQFAQADYTLPGTYLLDVQVNDVFFGLQPIEFVAHDDGQGA
RACVAPELVAQFGLKKSLVENLPRTMGGRCADLASLDGVTIRYQKGEGRLKITIAQAALEFADASYLPPERWSDGVDGAM
LDYRVLANANHAFGRGAQQNNAVQAYGTIGANWGAWRFRGDYQAQTRAGGAVYAERAFRFNQLYAYRALPSIRSTLSFGE
IYVDSDIFSTFSMSGVAMKSDDRMLPPSMRGYAPLVTGVARTNAIVKVMQDSRVLYMTKVSPGAFALSNLNTSVQGTLDV
VVEEEDGTVQRFQVATAAVPFLAREGQLRYKTAIGQPRTFGGAGITPWFGFAEAAYGLPFDVTVYGGLIAASGYTSVAFG
VGRDFGRFGALSADVTHARATLWWNGRTKRGNSYRINYSKHVDALDADVRFFGYRFSERDYTNFQQFSGDPTASGLANGK
QRYSAMLSKRFGDTSTYFSYDQTTYWARPSDRRIGVTLTRAFSLGALKSVNLGFSAFRTQGAGGGGNQVSLTATLPLGER
QTLTSSVSAGEGGTSVNAGYLYDGANGRTYQLYGGTTDGRASANASLRQRTPSYQLTAQASTVANAYASASLEVDGSFVA
TRYGVTAHANGNAGDTRLLVSTDGVPGVPLSGSYARTNARGYAVIDGVSPYNVYDATVSVEKLGLDTDVTNPIQRTVLTD
GAIGYIRFNAARGRNVFVTLTGDGGAPVPFGASVQDAATGKELGIVGEAGAAYLTQVQPRAKLVVRAGAKTICTPAALPD
TLQLDGTPAPVACEAAAQHASR

Specific function: Involved in the export and assembly of a fimbrial subunit across the outer membrane [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell outer membrane; Multi-pass membrane protein [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the fimbrial export usher family [H]

Homologues:

Organism=Escherichia coli, GI87081778, Length=813, Percent_Identity=32.3493234932349, Blast_Score=375, Evalue=1e-105,
Organism=Escherichia coli, GI1786744, Length=821, Percent_Identity=29.1108404384896, Blast_Score=274, Evalue=2e-74,
Organism=Escherichia coli, GI1790772, Length=846, Percent_Identity=27.8959810874704, Blast_Score=269, Evalue=5e-73,
Organism=Escherichia coli, GI1787172, Length=839, Percent_Identity=27.6519666269368, Blast_Score=264, Evalue=1e-71,
Organism=Escherichia coli, GI1786332, Length=834, Percent_Identity=26.8585131894484, Blast_Score=244, Evalue=2e-65,
Organism=Escherichia coli, GI1789533, Length=841, Percent_Identity=29.1319857312723, Blast_Score=242, Evalue=6e-65,
Organism=Escherichia coli, GI1788427, Length=835, Percent_Identity=25.2694610778443, Blast_Score=188, Evalue=1e-48,
Organism=Escherichia coli, GI1789610, Length=786, Percent_Identity=21.501272264631, Blast_Score=83, Evalue=7e-17,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000015
- InterPro:   IPR018030 [H]

Pfam domain/function: PF00577 Usher [H]

EC number: NA

Molecular weight: Translated: 87684; Mature: 87684

Theoretical pI: Translated: 8.94; Mature: 8.94

Prosite motif: PS01151 FIMBRIAL_USHER

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
1.3 %Met     (Translated Protein)
1.9 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
1.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRIRHSFLCVFMLAAGSHARATEFNASFLSIDGRNDVDLSQFAQADYTLPGTYLLDVQVN
CCCCHHHHHHHHHHCCCCCCEEECCCEEEEECCCCCCCHHHHHCCCCCCCCEEEEEEEEC
DVFFGLQPIEFVAHDDGQGARACVAPELVAQFGLKKSLVENLPRTMGGRCADLASLDGVT
CEEECCCCEEEEEECCCCCCEEEHHHHHHHHHCHHHHHHHHHHHHHCCCEEHHHCCCCEE
IRYQKGEGRLKITIAQAALEFADASYLPPERWSDGVDGAMLDYRVLANANHAFGRGAQQN
EEEECCCCEEEEEEEHHHHHHHCCCCCCHHHCCCCCCCCEEEEEEEECCCHHHCCCCCCC
NAVQAYGTIGANWGAWRFRGDYQAQTRAGGAVYAERAFRFNQLYAYRALPSIRSTLSFGE
CCEEEEEEECCCCCEEEEECCCCCCCCCCCEEEHHHHHHHHHHHHHHHCHHHHHHHCCCE
IYVDSDIFSTFSMSGVAMKSDDRMLPPSMRGYAPLVTGVARTNAIVKVMQDSRVLYMTKV
EEECCHHHHHHCCCCEEECCCCCCCCCCCCCCCHHHHHHHHHHHEEEEECCCEEEEEEEC
SPGAFALSNLNTSVQGTLDVVVEEEDGTVQRFQVATAAVPFLAREGQLRYKTAIGQPRTF
CCCEEEEECCCCCCCEEEEEEEECCCCCEEEEEEHHHHHHHHHCCCCEEEEECCCCCCCC
GGAGITPWFGFAEAAYGLPFDVTVYGGLIAASGYTSVAFGVGRDFGRFGALSADVTHARA
CCCCCCCCCCHHHHHCCCCEEEEEECCEEEECCCCEEEEECCCCCHHHCCCCCCCCEEEE
TLWWNGRTKRGNSYRINYSKHVDALDADVRFFGYRFSERDYTNFQQFSGDPTASGLANGK
EEEECCCCCCCCEEEEEHHHCCCCCCCCEEEEEEEECCCCCCCHHHHCCCCCHHHHCCHH
QRYSAMLSKRFGDTSTYFSYDQTTYWARPSDRRIGVTLTRAFSLGALKSVNLGFSAFRTQ
HHHHHHHHHHCCCCCEEEEECCEEEEECCCCCEEEEEEEEEECCCCEEECCCCHHHHEEC
GAGGGGNQVSLTATLPLGERQTLTSSVSAGEGGTSVNAGYLYDGANGRTYQLYGGTTDGR
CCCCCCCEEEEEEEECCCCCHHHHHCCCCCCCCCCCCCCEEEECCCCCEEEEECCCCCCC
ASANASLRQRTPSYQLTAQASTVANAYASASLEVDGSFVATRYGVTAHANGNAGDTRLLV
CCCCCHHHHCCCCEEEEECHHHHHHHHHEEEEEECCCEEEEEECEEEECCCCCCCEEEEE
STDGVPGVPLSGSYARTNARGYAVIDGVSPYNVYDATVSVEKLGLDTDVTNPIQRTVLTD
ECCCCCCCCCCCCCEECCCCCEEEEECCCCCEEEEEEEEEEHCCCCCCCCCHHHHHEECC
GAIGYIRFNAARGRNVFVTLTGDGGAPVPFGASVQDAATGKELGIVGEAGAAYLTQVQPR
CCEEEEEEECCCCCEEEEEEECCCCCCCCCCCCCCCCCCCCCEEEEECCCCEEHEECCCC
AKLVVRAGAKTICTPAALPDTLQLDGTPAPVACEAAAQHASR
CEEEEECCCCCEECCCCCCCCEEECCCCCCEEHHHHHHHCCC
>Mature Secondary Structure
MRIRHSFLCVFMLAAGSHARATEFNASFLSIDGRNDVDLSQFAQADYTLPGTYLLDVQVN
CCCCHHHHHHHHHHCCCCCCEEECCCEEEEECCCCCCCHHHHHCCCCCCCCEEEEEEEEC
DVFFGLQPIEFVAHDDGQGARACVAPELVAQFGLKKSLVENLPRTMGGRCADLASLDGVT
CEEECCCCEEEEEECCCCCCEEEHHHHHHHHHCHHHHHHHHHHHHHCCCEEHHHCCCCEE
IRYQKGEGRLKITIAQAALEFADASYLPPERWSDGVDGAMLDYRVLANANHAFGRGAQQN
EEEECCCCEEEEEEEHHHHHHHCCCCCCHHHCCCCCCCCEEEEEEEECCCHHHCCCCCCC
NAVQAYGTIGANWGAWRFRGDYQAQTRAGGAVYAERAFRFNQLYAYRALPSIRSTLSFGE
CCEEEEEEECCCCCEEEEECCCCCCCCCCCEEEHHHHHHHHHHHHHHHCHHHHHHHCCCE
IYVDSDIFSTFSMSGVAMKSDDRMLPPSMRGYAPLVTGVARTNAIVKVMQDSRVLYMTKV
EEECCHHHHHHCCCCEEECCCCCCCCCCCCCCCHHHHHHHHHHHEEEEECCCEEEEEEEC
SPGAFALSNLNTSVQGTLDVVVEEEDGTVQRFQVATAAVPFLAREGQLRYKTAIGQPRTF
CCCEEEEECCCCCCCEEEEEEEECCCCCEEEEEEHHHHHHHHHCCCCEEEEECCCCCCCC
GGAGITPWFGFAEAAYGLPFDVTVYGGLIAASGYTSVAFGVGRDFGRFGALSADVTHARA
CCCCCCCCCCHHHHHCCCCEEEEEECCEEEECCCCEEEEECCCCCHHHCCCCCCCCEEEE
TLWWNGRTKRGNSYRINYSKHVDALDADVRFFGYRFSERDYTNFQQFSGDPTASGLANGK
EEEECCCCCCCCEEEEEHHHCCCCCCCCEEEEEEEECCCCCCCHHHHCCCCCHHHHCCHH
QRYSAMLSKRFGDTSTYFSYDQTTYWARPSDRRIGVTLTRAFSLGALKSVNLGFSAFRTQ
HHHHHHHHHHCCCCCEEEEECCEEEEECCCCCEEEEEEEEEECCCCEEECCCCHHHHEEC
GAGGGGNQVSLTATLPLGERQTLTSSVSAGEGGTSVNAGYLYDGANGRTYQLYGGTTDGR
CCCCCCCEEEEEEEECCCCCHHHHHCCCCCCCCCCCCCCEEEECCCCCEEEEECCCCCCC
ASANASLRQRTPSYQLTAQASTVANAYASASLEVDGSFVATRYGVTAHANGNAGDTRLLV
CCCCCHHHHCCCCEEEEECHHHHHHHHHEEEEEECCCEEEEEECEEEECCCCCCCEEEEE
STDGVPGVPLSGSYARTNARGYAVIDGVSPYNVYDATVSVEKLGLDTDVTNPIQRTVLTD
ECCCCCCCCCCCCCEECCCCCEEEEECCCCCEEEEEEEEEEHCCCCCCCCCHHHHHEECC
GAIGYIRFNAARGRNVFVTLTGDGGAPVPFGASVQDAATGKELGIVGEAGAAYLTQVQPR
CCEEEEEEECCCCCEEEEEEECCCCCCCCCCCCCCCCCCCCCEEEEECCCCEEHEECCCC
AKLVVRAGAKTICTPAALPDTLQLDGTPAPVACEAAAQHASR
CEEEEECCCCCEECCCCCCCCEEECCCCCCEEHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 9205837; 9278503 [H]