| Definition | Burkholderia pseudomallei K96243 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_006350 |
| Length | 4,074,542 |
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The map label for this gene is gutB [H]
Identifier: 53719403
GI number: 53719403
Start: 2128282
End: 2129373
Strand: Reverse
Name: gutB [H]
Synonym: BPSL1790
Alternate gene names: 53719403
Gene position: 2129373-2128282 (Counterclockwise)
Preceding gene: 53719404
Following gene: 53719402
Centisome position: 52.26
GC content: 69.05
Gene sequence:
>1092_bases ATGACGAATCGAAACGACGAAACGCAGCAGATGACGGCGATCGTCTGCCATGCCCCCGAGGACTACCGCGTCGAGCGCGT CGCGAAGCCGCGCGCGAACGCGCGCGAGCTCGTGATCCGCATCGGCGCGTGCGGCATCTGCGCGAGCGACTGCAAGTGCC ACGCCGGCGCGAAGATGTTCTGGGGCGGGCCGAGCCCGTGGGTCAAGGCGCCCGTGATTCCCGGCCACGAGTTCTTCGGC TACGTCGAGGCGCTGGGCGAGGGCGCGGCCGAGCACTTCGGCGTCGCGCTCGGCGATCGCGTGATCGCCGAGCAGATCGT GCCGTGCGGCACGTGCCGCTATTGCAAGTCGGGCCAGTACTGGATGTGCGAGGTCCATCACATCTTCGGCTTTCAGCGCG AGGTCGCCGACGGCGGGATGGCCGAGTACATGCGCATACCGTCGGGCGCGATCGTCCACCCGGTCCCGCTCGGCATCTCG CTCGAGGACGCGGCGATCATCGAGCCGCTCGCGTGCGCGATCCACACGGTCAATCGCGGCGACATCCAGCTCGACGACGT CGTCGTGATCGCGGGCGCGGGCCCGCTCGGCCTGATGATGACGCAGGTCGCGAAGCTGAAGACGCCCAGGCGGCTCGTCG TCGTCGATCCCGTCGAAGCGCGGCGCGCGCTCGCGCGCGCATACGGCGCCGACGTGACGATCGATCCGGCCCGCGAGGAC GCGCCCGCGATCGTGCGCGCGCTGACGGGGGGCTACGGCTGCGACGTCTACATCGAGACGACCGGCGTGCCGGCGGGCGT CACGCAGGGCATGGCGCTGATCCGCAAGCTCGGCCGCTTCGTCGAGTTCTCGGTGTTCGGCAAGGATACGGCGCTCGACT GGTCGATCATCGGCGATCGCAAGGAGCTCGACGTGCGCGGCGCGCATCTCGGCCCGTATTGCTATCCTGTCGCGATCGAT CTGCTCGCGCGCGGGCTCGTCACGTCGAAGGGCATCGTCACGCACGGCTTCTCGCTCGACGAATGGGACGAGGCGATCCG GGTCGCGAACTCGCTCGACTCGATCAAGGTGCTGATGAAGCCGCGCGGCTGA
Upstream 100 bases:
>100_bases TCCGCCGCGCGCGCTCGATCCGCTTCATCCGCTTCATCCGCGCGCGGGCCGCCGCATCCGGCCTGCCGTTTTCTCGAACT CAGCCAGCCAAACCGAAACC
Downstream 100 bases:
>100_bases GCGCGCGGCTCACCGGGACGCGGAGGCGATATGGCATGCGTGATTGGTGTCGACATCGGCACCCAGAGCACGAAGGCGGT GCTCGTCGGCCTCGACGGCG
Product: putative zinc-binding dehydrogenase
Products: NA
Alternate protein names: Glucitol dehydrogenase; L-iditol 2-dehydrogenase [H]
Number of amino acids: Translated: 363; Mature: 362
Protein sequence:
>363_residues MTNRNDETQQMTAIVCHAPEDYRVERVAKPRANARELVIRIGACGICASDCKCHAGAKMFWGGPSPWVKAPVIPGHEFFG YVEALGEGAAEHFGVALGDRVIAEQIVPCGTCRYCKSGQYWMCEVHHIFGFQREVADGGMAEYMRIPSGAIVHPVPLGIS LEDAAIIEPLACAIHTVNRGDIQLDDVVVIAGAGPLGLMMTQVAKLKTPRRLVVVDPVEARRALARAYGADVTIDPARED APAIVRALTGGYGCDVYIETTGVPAGVTQGMALIRKLGRFVEFSVFGKDTALDWSIIGDRKELDVRGAHLGPYCYPVAID LLARGLVTSKGIVTHGFSLDEWDEAIRVANSLDSIKVLMKPRG
Sequences:
>Translated_363_residues MTNRNDETQQMTAIVCHAPEDYRVERVAKPRANARELVIRIGACGICASDCKCHAGAKMFWGGPSPWVKAPVIPGHEFFG YVEALGEGAAEHFGVALGDRVIAEQIVPCGTCRYCKSGQYWMCEVHHIFGFQREVADGGMAEYMRIPSGAIVHPVPLGIS LEDAAIIEPLACAIHTVNRGDIQLDDVVVIAGAGPLGLMMTQVAKLKTPRRLVVVDPVEARRALARAYGADVTIDPARED APAIVRALTGGYGCDVYIETTGVPAGVTQGMALIRKLGRFVEFSVFGKDTALDWSIIGDRKELDVRGAHLGPYCYPVAID LLARGLVTSKGIVTHGFSLDEWDEAIRVANSLDSIKVLMKPRG >Mature_362_residues TNRNDETQQMTAIVCHAPEDYRVERVAKPRANARELVIRIGACGICASDCKCHAGAKMFWGGPSPWVKAPVIPGHEFFGY VEALGEGAAEHFGVALGDRVIAEQIVPCGTCRYCKSGQYWMCEVHHIFGFQREVADGGMAEYMRIPSGAIVHPVPLGISL EDAAIIEPLACAIHTVNRGDIQLDDVVVIAGAGPLGLMMTQVAKLKTPRRLVVVDPVEARRALARAYGADVTIDPAREDA PAIVRALTGGYGCDVYIETTGVPAGVTQGMALIRKLGRFVEFSVFGKDTALDWSIIGDRKELDVRGAHLGPYCYPVAIDL LARGLVTSKGIVTHGFSLDEWDEAIRVANSLDSIKVLMKPRG
Specific function: Reduces glucitol to fructose [H]
COG id: COG1063
COG function: function code ER; Threonine dehydrogenase and related Zn-dependent dehydrogenases
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the zinc-containing alcohol dehydrogenase family [H]
Homologues:
Organism=Homo sapiens, GI156627571, Length=350, Percent_Identity=30.2857142857143, Blast_Score=148, Evalue=9e-36, Organism=Homo sapiens, GI4501929, Length=378, Percent_Identity=23.5449735449735, Blast_Score=67, Evalue=4e-11, Organism=Homo sapiens, GI71565154, Length=395, Percent_Identity=23.5443037974684, Blast_Score=67, Evalue=4e-11, Organism=Escherichia coli, GI1787863, Length=340, Percent_Identity=27.3529411764706, Blast_Score=134, Evalue=1e-32, Organism=Escherichia coli, GI1790045, Length=346, Percent_Identity=30.3468208092486, Blast_Score=131, Evalue=7e-32, Organism=Escherichia coli, GI1788073, Length=351, Percent_Identity=29.3447293447293, Blast_Score=130, Evalue=2e-31, Organism=Escherichia coli, GI226510992, Length=348, Percent_Identity=29.3103448275862, Blast_Score=122, Evalue=4e-29, Organism=Escherichia coli, GI1788407, Length=336, Percent_Identity=27.9761904761905, Blast_Score=118, Evalue=6e-28, Organism=Escherichia coli, GI1788075, Length=364, Percent_Identity=28.021978021978, Blast_Score=113, Evalue=2e-26, Organism=Escherichia coli, GI87082125, Length=284, Percent_Identity=30.6338028169014, Blast_Score=100, Evalue=2e-22, Organism=Escherichia coli, GI1786825, Length=279, Percent_Identity=29.3906810035842, Blast_Score=99, Evalue=5e-22, Organism=Escherichia coli, GI1790718, Length=320, Percent_Identity=26.5625, Blast_Score=98, Evalue=7e-22, Organism=Escherichia coli, GI87081918, Length=222, Percent_Identity=31.0810810810811, Blast_Score=65, Evalue=9e-12, Organism=Caenorhabditis elegans, GI17562876, Length=359, Percent_Identity=30.08356545961, Blast_Score=157, Evalue=9e-39, Organism=Caenorhabditis elegans, GI17562878, Length=357, Percent_Identity=28.5714285714286, Blast_Score=145, Evalue=4e-35, Organism=Caenorhabditis elegans, GI71997431, Length=261, Percent_Identity=25.6704980842912, Blast_Score=66, Evalue=3e-11, Organism=Caenorhabditis elegans, GI25146526, Length=261, Percent_Identity=26.0536398467433, Blast_Score=65, Evalue=4e-11, Organism=Saccharomyces cerevisiae, GI6323099, Length=366, Percent_Identity=27.8688524590164, Blast_Score=113, Evalue=5e-26, Organism=Saccharomyces cerevisiae, GI6322619, Length=342, Percent_Identity=27.4853801169591, Blast_Score=103, Evalue=4e-23, Organism=Saccharomyces cerevisiae, GI6319955, Length=342, Percent_Identity=27.4853801169591, Blast_Score=103, Evalue=5e-23, Organism=Saccharomyces cerevisiae, GI6319257, Length=277, Percent_Identity=28.158844765343, Blast_Score=86, Evalue=7e-18, Organism=Saccharomyces cerevisiae, GI6319258, Length=274, Percent_Identity=25.9124087591241, Blast_Score=77, Evalue=4e-15, Organism=Saccharomyces cerevisiae, GI6324486, Length=346, Percent_Identity=28.0346820809249, Blast_Score=74, Evalue=5e-14, Organism=Saccharomyces cerevisiae, GI6320033, Length=260, Percent_Identity=23.8461538461538, Blast_Score=68, Evalue=2e-12, Organism=Saccharomyces cerevisiae, GI6323961, Length=323, Percent_Identity=28.4829721362229, Blast_Score=64, Evalue=3e-11, Organism=Drosophila melanogaster, GI17137530, Length=346, Percent_Identity=28.9017341040462, Blast_Score=119, Evalue=4e-27, Organism=Drosophila melanogaster, GI17737897, Length=365, Percent_Identity=29.041095890411, Blast_Score=114, Evalue=8e-26, Organism=Drosophila melanogaster, GI221457811, Length=352, Percent_Identity=24.1477272727273, Blast_Score=71, Evalue=1e-12, Organism=Drosophila melanogaster, GI45550770, Length=352, Percent_Identity=24.1477272727273, Blast_Score=71, Evalue=1e-12, Organism=Drosophila melanogaster, GI45551930, Length=352, Percent_Identity=24.1477272727273, Blast_Score=71, Evalue=1e-12,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR013149 - InterPro: IPR013154 - InterPro: IPR002085 - InterPro: IPR002328 - InterPro: IPR011032 - InterPro: IPR016040 [H]
Pfam domain/function: PF08240 ADH_N; PF00107 ADH_zinc_N [H]
EC number: =1.1.1.14 [H]
Molecular weight: Translated: 39181; Mature: 39050
Theoretical pI: Translated: 6.50; Mature: 6.50
Prosite motif: PS00059 ADH_ZINC
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
3.3 %Cys (Translated Protein) 2.8 %Met (Translated Protein) 6.1 %Cys+Met (Translated Protein) 3.3 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 5.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTNRNDETQQMTAIVCHAPEDYRVERVAKPRANARELVIRIGACGICASDCKCHAGAKMF CCCCCCCHHEEEEEEEECCCCCCHHHHHCCCCCCEEEEEEECCCCEECCCCCCCCCCEEE WGGPSPWVKAPVIPGHEFFGYVEALGEGAAEHFGVALGDRVIAEQIVPCGTCRYCKSGQY ECCCCCCEECCCCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCCCHHCCCCCE WMCEVHHIFGFQREVADGGMAEYMRIPSGAIVHPVPLGISLEDAAIIEPLACAIHTVNRG EEEEEHHHHCHHHHHHCCCHHHHHCCCCCCEEECCCCCCEECCHHHHHHHHHHHEECCCC DIQLDDVVVIAGAGPLGLMMTQVAKLKTPRRLVVVDPVEARRALARAYGADVTIDPARED CEEECCEEEEECCCHHHHHHHHHHHHCCCCEEEEECCHHHHHHHHHHHCCCEEECCCCCC APAIVRALTGGYGCDVYIETTGVPAGVTQGMALIRKLGRFVEFSVFGKDTALDWSIIGDR HHHHHHHHCCCCCEEEEEEECCCCCCHHHHHHHHHHHHHHEEEEEECCCCCEEEEEECCC KELDVRGAHLGPYCYPVAIDLLARGLVTSKGIVTHGFSLDEWDEAIRVANSLDSIKVLMK CCCEECCCCCCCHHHHHHHHHHHHHHHCCCCEEEECCCCHHHHHHHHHHCCCCCEEEEEC PRG CCC >Mature Secondary Structure TNRNDETQQMTAIVCHAPEDYRVERVAKPRANARELVIRIGACGICASDCKCHAGAKMF CCCCCCHHEEEEEEEECCCCCCHHHHHCCCCCCEEEEEEECCCCEECCCCCCCCCCEEE WGGPSPWVKAPVIPGHEFFGYVEALGEGAAEHFGVALGDRVIAEQIVPCGTCRYCKSGQY ECCCCCCEECCCCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCCCHHCCCCCE WMCEVHHIFGFQREVADGGMAEYMRIPSGAIVHPVPLGISLEDAAIIEPLACAIHTVNRG EEEEEHHHHCHHHHHHCCCHHHHHCCCCCCEEECCCCCCEECCHHHHHHHHHHHEECCCC DIQLDDVVVIAGAGPLGLMMTQVAKLKTPRRLVVVDPVEARRALARAYGADVTIDPARED CEEECCEEEEECCCHHHHHHHHHHHHCCCCEEEEECCHHHHHHHHHHHCCCEEECCCCCC APAIVRALTGGYGCDVYIETTGVPAGVTQGMALIRKLGRFVEFSVFGKDTALDWSIIGDR HHHHHHHHCCCCCEEEEEEECCCCCCHHHHHHHHHHHHHHEEEEEECCCCCEEEEEECCC KELDVRGAHLGPYCYPVAIDLLARGLVTSKGIVTHGFSLDEWDEAIRVANSLDSIKVLMK CCCEECCCCCCCHHHHHHHHHHHHHHHCCCCEEEECCCCHHHHHHHHHHCCCCCEEEEEC PRG CCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 10086842; 11058132 [H]