| Definition | Burkholderia pseudomallei K96243 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_006350 |
| Length | 4,074,542 |
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The map label for this gene is glcG [C]
Identifier: 53719361
GI number: 53719361
Start: 2059719
End: 2060168
Strand: Reverse
Name: glcG [C]
Synonym: BPSL1747
Alternate gene names: 53719361
Gene position: 2060168-2059719 (Counterclockwise)
Preceding gene: 53719366
Following gene: 53719360
Centisome position: 50.56
GC content: 73.78
Gene sequence:
>450_bases ATGTCCCCCGAACTCACGCTCGAACGCGCGCTGCGCATCGTCGAAGCGGGCGTTGCGCACGCCGCGCGCCTGAGCGCCGC GGGCGCGGCCGTCGCGATCGCCGTGGTCGACGCGGGCGCGCATCTCGCCGCGTTCGCGCGGATGGACGACGCGTTCATCG GCGCGATCGATCTCGCGACGCGCAAGGCCGGCACGGCCGCGCGCTTCCGGATGCCGAGCGCGTCGCTCGGCGCGCTGTCG GGCGCGGGCGGGCCGGTCCGCTCGATCGAGCACAGCAACGGCGGACTCGTCACGTTCGGCGGCGGCCTGCCGCTCGTCGA CGCGCACGGGCGCTGCGTGGGCGCGGTCGGCGTGTCGGGCGGCACGGTCGACGACGACGCGGCGATCGCGCAGGTGTGCG TCGACGCTTTCATCACTCTTCTGAACGCAGCACAAGGAGCAAGGACATGA
Upstream 100 bases:
>100_bases CATTAGAAAAACTTGATACGTTTGTGAGCGGAATACCGATTCTCTCAGATACCGCCGGTCCCTACACTGGCTCGCAGTCG AACCGCACAAGGAGCCGCCG
Downstream 100 bases:
>100_bases CGGGTAAACGCATTCTGGTGACGGGCGCGGGCTCGGGTTTCGGCCGCGAGGTCGCGCTGCGGCTCGCCGCGAAGGGCCAT TGCGTGATCGCGGGGGTGCA
Product: hypothetical protein
Products: NA
Alternate protein names: ORFY [H]
Number of amino acids: Translated: 149; Mature: 148
Protein sequence:
>149_residues MSPELTLERALRIVEAGVAHAARLSAAGAAVAIAVVDAGAHLAAFARMDDAFIGAIDLATRKAGTAARFRMPSASLGALS GAGGPVRSIEHSNGGLVTFGGGLPLVDAHGRCVGAVGVSGGTVDDDAAIAQVCVDAFITLLNAAQGART
Sequences:
>Translated_149_residues MSPELTLERALRIVEAGVAHAARLSAAGAAVAIAVVDAGAHLAAFARMDDAFIGAIDLATRKAGTAARFRMPSASLGALS GAGGPVRSIEHSNGGLVTFGGGLPLVDAHGRCVGAVGVSGGTVDDDAAIAQVCVDAFITLLNAAQGART >Mature_148_residues SPELTLERALRIVEAGVAHAARLSAAGAAVAIAVVDAGAHLAAFARMDDAFIGAIDLATRKAGTAARFRMPSASLGALSG AGGPVRSIEHSNGGLVTFGGGLPLVDAHGRCVGAVGVSGGTVDDDAAIAQVCVDAFITLLNAAQGART
Specific function: Unknown
COG id: COG3193
COG function: function code R; Uncharacterized protein, possibly involved in utilization of glycolate and propanediol
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the glcG family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR005624 [H]
Pfam domain/function: PF03928 DUF336 [H]
EC number: NA
Molecular weight: Translated: 14631; Mature: 14500
Theoretical pI: Translated: 6.51; Mature: 6.51
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 2.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSPELTLERALRIVEAGVAHAARLSAAGAAVAIAVVDAGAHLAAFARMDDAFIGAIDLAT CCCCHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEEEECCCHHHHHHHHCCHHHHHHHHHH RKAGTAARFRMPSASLGALSGAGGPVRSIEHSNGGLVTFGGGLPLVDAHGRCVGAVGVSG CCCCCCEEEECCCCCCCCCCCCCCCCCEEEECCCCEEEECCCCCEEECCCCEEEEEECCC GTVDDDAAIAQVCVDAFITLLNAAQGART CCCCCHHHHHHHHHHHHHHHHHHHCCCCC >Mature Secondary Structure SPELTLERALRIVEAGVAHAARLSAAGAAVAIAVVDAGAHLAAFARMDDAFIGAIDLAT CCCHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEEEECCCHHHHHHHHCCHHHHHHHHHH RKAGTAARFRMPSASLGALSGAGGPVRSIEHSNGGLVTFGGGLPLVDAHGRCVGAVGVSG CCCCCCEEEECCCCCCCCCCCCCCCCCEEEECCCCEEEECCCCCEEECCCCEEEEEECCC GTVDDDAAIAQVCVDAFITLLNAAQGART CCCCCHHHHHHHHHHHHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA